Dtru004594.1
Basic Information
- Insect
- Drosophila truncata
- Gene Symbol
- retn
- Assembly
- GCA_008042515.1
- Location
- VNJQ01001013.1:153533-166259[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-26 9e-23 80.6 0.0 2 89 276 361 275 361 0.96 2 2 2.5 7.7e+03 -2.6 0.7 11 11 523 523 489 565 0.59
Sequence Information
- Coding Sequence
- ATGACCACTGCCCACGCAGTGTCACATGGTGATCGAACAGACGACGAAATGAGAGACTGCGACTCTGTGGATGGTGAGCATCATCAGCTGAGCGCCAAGGCGGCTATTGCGGCCCGTCTAAGTCACACAGTTTCCGGCGGAGGAGGTAACTTTGCCAGTCCCGAGCCACAGACCGAGCTGCCCCTAAGccatcatcatcaactgCCGCCGAATCATCCGCTGAATGCCCTGGGCAGCTTCATGGGCATCGGTGGCCTACACAGCATTCCAAATCTGCAGCACAGCGACGTTCTAGAGAAGCTCAAAATGCAGGTGCGAGACATGAAGGTGGGCCTGATGGAACAGGattatgcagcagcagcccatgCAGCAGCCTTTGGAGCCAATATGCTGCCCACCACCATTAATTCGGGCTTCCCATTGCCCCACAATTCGGtggctgcagcggcagcagctgcctccTTTGGCCATGTGACCTCGGCTCCAAGTGGTGGCAATAATTATAATGGAGGCACTACCACAACATCCAGTAATAATAGTAATCCCAGCAGCAATGGTGGAGGAACAgctggcggaggaggaggcggaggaggaggtacAGGAACAGGCAGTTCAGCCTCAAGTGGAGGTGGTCATCCCTTCTCATTTGCTTCACCCACAGCAGCGCCCAGCGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCATCCAATTCATCCCAACAGAATAATGGATGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAACGATGACCCCAAACGCAAAGAATTCCTGGACGATTTGTTCTCATTTATGCAAAAGCGCGGCACTCCGATCAATCGACTGCCGATTATGGCCAAATCGGTGCTGGATCTGTATGAACTGTACAATCTGGTGATAGCCCGCGGCGGCTTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCTTCAAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTCTACCCGTACGAGTGCGAGAAGAAGAACCTAAGCACACCGGCGGAGCTGCAGGCGGCCATCGATGGCAATCGCCGGGAAGGACGTCGCTCCAGCTACGGCCAGTACGAGGCTATGCACAATCAGATGCCGCTGACGCCCATTTCGCGACCCTCTCTCCCAGGTGGCATGCAACAAATGTCCCCTCTGGCCTTGGTCACCCATGCCGCTGTGGCCAATAATCAGCAGGCTcaggctgctgccgccgctgctgcagcccaTCACCGACTGATGGGTGCCCCGGCCTTTGGCCAAATGCCCAACCTGGTCAAGCAGGAGATCGAAAGCCGCATGATGGAATATTTGCAGTTGATTCAGGCCAAGAAGGAGCAAGTCATGCCGCCGGGCTTGAGTGCTAGCCTGcctcatcagcagcatcagcagcagcaggcacagcagcagcaacaccagcagcagcagcagtcacagtcgcagcagcagcagcagcaacagcagcaacatcacctgcagcagcaacagcagcagcgtcagcGCTCCCAGAGTCCCGATCTGAGCAAGCACGAGGCGCTCAGCGCCCAGGTGGCACTGTGGCACATGTATCATAACAACAACAGTCCGCCGGGATCAGCACACACCTCCCCACAGCAACGTGAAGCTCTGAACCTCTCCGACTCACCGCCGAATCTCACGAACATCAAAAGGGAACGCGAACGGGAGCCGACGCCTGAGCCCGTGGAGCAGGATGACCTCTCCACCGGCCACCAGCCGCCGCCGGCCAAGCGCATGGGCAGCGGCCTCCTGCCACCTGGCTTCCCTGCCAACTTCTACCTGAATCCCCACAACATGGccgcagtggcagcagcagcaggcttcCATCATcaacaggcagcagcagcggcggccggGCATcaccatcaacagcagcagcagcagcaggatgctGCCTCCGAGGGCGAGCCGGAGGATGAGTACGGACATGGAGAGCACAATACCACAGGAAACTCTTCCTCGCTGCACGATGACAGCGAGACAGCGCAGCCCATGAATGGCCATGgacaccaccatcaccatcatcataaCCATCACCACCAGAGTCATCAGTTGGACAAATCAGATGATTCGGCCATTGAGAACTCGCCCAGCActtccaccaccaccgcctcgGTGGGTCATCGCCACAGCTCGCCAGTTTCCACCAAAAAGAAGAGCGGATCCAAGGCACAGGATAAGGATTTAGCTGGTGGGGGGGATAAGGGTGTATCCAGTGGCAAGCTGAATCCTTTGGAAACACTGAGCCTGCTCTCGGGCATGCAGTTCCAGGTGGCCAGAAATGGCACCGGCGAGAATGGTGAGCAACAGTTGATGGTTAATCTGGAGCTGAATGGCGTCAAGTATTCGGGTGTCCTGGTGGCCAATGTGGCTCACTCCAAGCAGACAAGCGTGACAAGGAACAGCTCGCCCTGCCATGAGGCTGAAGCTCTGCCCAACGAGGAAGAGGATGGGGAGCACGACGATGAGGAAGCGGAGGAGGAGCCCCGAAAAGCTGCTGACGAGGAGGACGAAGCCCATCGATCGCCCATTAAGACAGAGAACGAGCATGAGGAGGACCAGGACATGGAGGCCATTGtgaatggaggaggaggaggtggcacTGGCAATGGTTCGACAGTGGGTGTGGCTATGCCCCTGCTCAAGGATGCGGTGGTCAGCTAG
- Protein Sequence
- MTTAHAVSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGNFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTINSGFPLPHNSVAAAAAAASFGHVTSAPSGGNNYNGGTTTTSSNNSNPSSNGGGTAGGGGGGGGGTGTGSSASSGGGHPFSFASPTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQVMPPGLSASLPHQQHQQQQAQQQQHQQQQQSQSQQQQQQQQQHHLQQQQQQRQRSQSPDLSKHEALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVEQDDLSTGHQPPPAKRMGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHQQAAAAAAGHHHQQQQQQQDAASEGEPEDEYGHGEHNTTGNSSSLHDDSETAQPMNGHGHHHHHHHNHHHQSHQLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKSGSKAQDKDLAGGGDKGVSSGKLNPLETLSLLSGMQFQVARNGTGENGEQQLMVNLELNGVKYSGVLVANVAHSKQTSVTRNSSPCHEAEALPNEEEDGEHDDEEAEEEPRKAADEEDEAHRSPIKTENEHEEDQDMEAIVNGGGGGGTGNGSTVGVAMPLLKDAVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00527091;
- 90% Identity
- iTF_00593633; iTF_00477802; iTF_00489161; iTF_00532891; iTF_00527091; iTF_00594329; iTF_00561530;
- 80% Identity
- -