Basic Information

Insect: Drosophila santomea
Gene Symbol: retn
Assembly: GCA_016746245.1
Location: NC:21001929-21025186[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 2.8e-26 6.3e-23 80.6 0.0 2 89 291 376 290 376 0.96

2 2 2.4 5.4e+03 -2.5 0.3 12 12 533 533 508 574 0.54

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	2.8e-26	6.3e-23	80.6	0.0	2	89	291	376	290	376	0.96
2	2	2.4	5.4e+03	-2.5	0.3	12	12	533	533	508	574	0.54

Sequence Information

Coding Sequence: ATGCAACTGCGAGTGCACCCTACTATGGACTGTAGCGGTCGTTCAGCCAGCAACATTGAACGCGATTCCGATCTGGGCGACGATTTGtCACATGGTGATCGAACGGACGACGAGATGCGCGACTGCGACTCCGTGGATGGGGAGCATCATCAGCTGAGCGCCAAGGCGGCGATTGCAGCCCGCTTGAGTCACACAGTTTCCGGCGGCGGAGGCAGCTTTGCCAGCCCCGAACCGCAGACCGAGCTGCCCCTGAGCCATCACCATCAACTGCCGCCGAATCATCCGCTCAACGCTCTGGGCAGCTTCATGGGCATCGGCGGACTACACAGCATTCCAAATCTCCAGCACAGCGATGTGCTCGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGCCTGATGGAACAGGACTACGCTGCCGCAGCACATGCCGCTGCTTTCGGGGCCAACATGCTGCCCACGACGATCAGCTCGGGCTTCCCACTGCCCCACAACTCGGTGGCCTTTGGCCATGTCAGCTCGGCGCCCAGCGGTGGCAATGGGAGCAGCTACAACGGAGGCACCACCCCCACGCCCAGCGCCAACAGCAATGCGGCCACCAATGGAGGCGCCACCACCGGACCCGGAGGAACAGGTGGATCGGGtggcggaggagcaggaggaggaggcggcggcggaggagtGGGTGGCCACCAGTTCTCGTTTGCATCCCCCACAGCAGCGCCGAGCGGCAAAGAAGCCAATTCCGCATCGAACTCGTCGACGTCCAGCGAGGCTTCCAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTTCAAACAAGTCAGACAGCTCTATGAAATCAACGATGACCCCAAGCGCAAAGAGTTCCTGGACGACTTGTTCTCATTTATGCAGAAGCGCGGAACTCCGATCAATCGGCTGCCGATCATGGCCAAATCGGTGCTGGATCTCTACGAGCTGTACAATCTGGTGATAGCCCGCGGCGGCTTGGTGGATGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCACCTGCCCTCCAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAACCTCAGCACGCCGGCGGAGCTGCAGGCGGCCATCGATGGGAATCGCCGGGAAGGACGTCGCTCCAGCTACGGCCAGTACGAGGCCATGCACAACCAGATGCCGATGACGCCCATTTCGAGACCCTCCCTCCCCGGTGGCATGCAGCAAATGTCGCCGCTGGCACTGGTCACCCATGCCGCGGTGGCCAACAATCAGCAGGCACAGGCCGCCGCTGCAGCCGCGGCAGCTCATCATCGCCTGATGGGCGCTCCCGCCTTTGGCCAGATGCCCAACCTGGTCAAGCAGGAGATCGAGAGCCGGATGATGGAGTATCTGCAGCTGATCCAGGCCAAGAAGGAGCAGGGCATGCCGCCCGTTCTGGGCGCCAATCAtccccaccagcagcagcactcacagcaccagcagcagcagcagcaccaccagcagcagcagcagcagcagtcgcagcagcaacaccacctgcagcagcagcgccagcggTCGCAGAGTCCGGATCTGAGCAAGCACGACGCACTCAGTGCCCAGGTGGCCCTGTGGCACATgtaccacaacaacaacagcccGCCGGGCTCGGCACACACATCGCCGCAGCAACGCGAAGCCCTGAACCTCTCCGACTCGCCTCCAAATCTCACAAACATCAAGCGGGAACGCGAACGGGAGCCCACTCCAGAGCCCGTGGACCAGGATGACAAATTTGTGGACCAGCCGCCTCCAGCGAAGCGCGTGGGCAGTGGCCTCCTTCCGCCCGGCTTTCCTGCCAACTTCTACCTGAATCCACACAACATGGCCGCTGTGGCAGCAGCTGCGGGATTCCATCACCCATCCATGGGCCACCAGCAGGATGCCGCATCTGAGGGCGAACCGGAGGACGACTACGCCCACGCCGAGCACAACACCACGGGCAACTCATCCTCGATGCACGACGACAGCGAACCGCAGCAGATGAACggacaccaccaccaccagacCCACCATCTGGACAAGTCCGATGACTCGGCCATTGAGAACTCACCCACCACGTCGACCACCACCGGTGGGTCGGTGGGTCATCGCCACAGCTCGCCCGTTTCCACCAAGAAGAAGGGCGGCGCTAAGCCCCAGAGTGGAGGAAAGGATCTGCCGTCCGAGGACAAGGATGCGTCGTCCAGTGGCAAGCTCAATCCCCTCGAGACGCTGAGCCTGCTGTCCGGCATGCAGTTTCAAGTGGCAAGGAATGGAACTGGCGATAACGGCGAACCGCAGCTGATTGTCAATCTGGAGCTTAATGGCGTCAAGTACTCTGGGGTGCTGGTGGCCAATGTGCCGCTGTCCCAAAGCGAGACAAGGACGAGCTCACCCTGCCACGCTGAAGCACCAACAGCCGAGGAGGAgaaggatgaggaggaggagccgaAAGCCGCTGAAGAGGAATCGCATCGATCGCCAGTCAAGCAGGAGAGCGAGGAAGCCGACCAGGACATGGAGGGCAGTGAAATCCTCCTGAACGGTGGTGCTTcggcggtgggtggtgctgttgctggtgtgggtgtgggtgtgccCCTGCTCAAGGATGCCGTGGTCAGCTAG
Protein Sequence: MQLRVHPTMDCSGRSASNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGSFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSGFPLPHNSVAFGHVSSAPSGGNGSSYNGGTTPTPSANSNAATNGGATTGPGGTGGSGGGGAGGGGGGGGVGGHQFSFASPTAAPSGKEANSASNSSTSSEASNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPMTPISRPSLPGGMQQMSPLALVTHAAVANNQQAQAAAAAAAAHHRLMGAPAFGQMPNLVKQEIESRMMEYLQLIQAKKEQGMPPVLGANHPHQQQHSQHQQQQQHHQQQQQQQSQQQHHLQQQRQRSQSPDLSKHDALSAQVALWHMYHNNNSPPGSAHTSPQQREALNLSDSPPNLTNIKREREREPTPEPVDQDDKFVDQPPPAKRVGSGLLPPGFPANFYLNPHNMAAVAAAAGFHHPSMGHQQDAASEGEPEDDYAHAEHNTTGNSSSMHDDSEPQQMNGHHHHQTHHLDKSDDSAIENSPTTSTTTGGSVGHRHSSPVSTKKKGGAKPQSGGKDLPSEDKDASSSGKLNPLETLSLLSGMQFQVARNGTGDNGEPQLIVNLELNGVKYSGVLVANVPLSQSETRTSSPCHAEAPTAEEEKDEEEEPKAAEEESHRSPVKQESEEADQDMEGSEILLNGGASAVGGAVAGVGVGVPLLKDAVVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00527091;
90% Identity: iTF_00505186;
80% Identity: -