Bcos004826.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bombus consobrinus
Gene Symbol
nfxl1
Assembly
GCA_014737455.1
Location
JACXIU010000087.1:973321-976073[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 1.1 8.7e+03 -3.2 1.1 15 19 126 130 125 130 0.81
2 19 0.14 1.2e+03 -0.5 0.8 4 10 161 167 160 167 0.95
3 19 5.6e-08 0.00045 20.0 15.1 1 18 175 191 175 192 0.98
4 19 1e-08 8.5e-05 22.4 16.0 1 19 229 246 229 246 0.95
5 19 0.33 2.7e+03 -1.6 0.3 5 10 270 275 270 277 0.93
6 19 6.6e-05 0.54 10.2 10.9 1 19 281 300 281 300 0.91
7 19 4.1e-05 0.34 10.9 9.2 1 18 336 353 336 354 0.97
8 19 0.0068 56 3.8 7.6 1 12 388 399 388 399 0.94
9 19 1.2 9.9e+03 -3.4 1.7 6 10 409 413 409 413 0.97
10 19 7.7e-08 0.00063 19.6 12.0 1 18 419 436 419 437 0.92
11 19 0.95 7.8e+03 -3.1 0.8 6 10 466 470 465 470 0.85
12 19 0.0021 17 5.4 10.5 9 19 485 495 483 495 0.90
13 19 0.00044 3.6 7.6 6.0 1 12 505 515 505 515 0.95
14 19 1.2 9.9e+03 -3.4 6.7 14 19 547 552 547 552 0.90
15 19 0.001 8.3 6.4 8.7 1 12 588 599 578 599 0.91
16 19 2 1.6e+04 -4.4 3.8 6 10 615 619 611 619 0.71
17 19 0.0011 9.1 6.3 15.0 4 19 629 644 627 644 0.91
18 19 0.68 5.6e+03 -2.6 0.1 3 6 659 662 653 665 0.61
19 19 9.2e-06 0.076 12.9 11.7 1 16 689 703 689 709 0.88

Sequence Information

Coding Sequence
ATGCAGAAATTTAGACAAGCTCAAGCAGAAAATAAAATAGCAATTAACAAACATTTAGAAGCAAATGCTTATCTAGAATCTTCCAGTGAGGATGAAGATGATAGAAATGAAGAGGATATACAAAATATAGTTGGAAAAGTAATATCTGCCTACCAAGGCAGAGAGGCAGATGCAGAAAAAATTTTATCATATTTAATTAATATTTTTCAATCTGGCAATGCTGTTTGTTTAATATGTATTTCAACTGTAAAAAGAGCAGATCCAATTTGGAATTGTAACAAGTGTTTTGCTTTCCTACATCTGTCTTGCATTTTGCATTGGATACAGGATAGTTTGAATATTAAACGCGAGAAAGGTATCACATCAATATGGGCATGTCCAAAATGTCGTATGGAATATAATCAAGATGACATTCCTCGTAACTATAAATGCTTTTGTAAAAAAACCATAGATCCCCCATATAGTCCATGGAATATTCCACATTCCTGTGGAGAAACATGCGACAAACTGCTGCAACCAGAATGTGGTCACAAATGTGTTTTGCTTTGCCATCCTGGACCATGTCCTCCTTGTGCAAAGACGGTATCTATTAAATGCTACTGTGGCAAACAGATGCCTCAACAACGACGATGCAATGCTAAAGAATGGAGTTGTGGTACTGAATGTAACAAAGAGTATAAGTTATGTTCACACACTTGCAAAGAAGTGTGTCACTCAGGGGAATGTCCTCCTTGTCCAGAAATATTATCACTAGAATGCCACTGTAAGAGTAACAAGGAATTAAAGCAATGCTCTGAAGGCCTATGGACTTGTAATAAAATTTGTGGTAGACCTCTTTCTTGTAATGTTCACATATGTCAAAGTAAATGTCATTTAATTGGCGACTGTGGACCCTGTCCATTGGAGAAGAATAGAACATGTCCGTGCGGGAAAAAACGTTATGCCATTTCTTGCAAACAAGAACAGCTACCCACATGTGGAGATACATGTGGAAAATTATTAAATTGCGGTTCGCATTATTGTAATATGAGATGTCATACAGATCGTTGCGGGCAGTGTTTAGAGGTGGTCACAAAATCGTGTAGATGTGGCAGCTATCAGAAAGAAATTGCATGTGGCAAAGAATTTCATTGCAATAAAAAGTGCATGCAAATGCGGTTATGCGGAAGACATTTGTGTAATAAGAAGTGCTGCGACTGCTTGATTAAAAACACATATAACGTGTGCGAAAAAGTATGCGATAATGCTTTAAACTGCCGCAAACACAAATGTGCTGCTCCTTGTCATAGCGGCCCTTGTTATCCATGCGCACGAACTGACGTTATTCAGTGTAGATGCGGATATAATAAGATAACAGTACCATGTGGTACGGTAAAAAAGATCAAGCCACCATCTTGCAATAAGCCATGTAAAATACCTCCGATTTGCCATCATCCCAAACGAGAAACCCACAAATGTCATCAAGGTCACTGTCCGCCTTGCAAAAAGATTTGCGACATGGTATATAAACGATGTGGTCATTCTTGTGCAGCTGTTTGCCACACAAAAATATGGCTGAAGGTGAGCAAAAATGACATAAAGACGCAACCAGCAGGACCATGGGACATACAAAAGGAAACTTATCAGCTAAAAACATTACCATGCCCACCATGTCAAGTTTCTGTACAAGTTACATGTTTAGGAGGGCATGAAACGCGTCCATGGCCTTGTCACATGGCTAGACCTACGTCTTGCGGAAGATTGTGCGGGAAAACGTTATTATGCACGAATCATACATGCGAATTGATTTGTCATAAAATACCATCTTGTGAAGAAAACAAGAATGGTACTCCGTGTATGGAGTGTGAAAAACCATGTTTACTTCCACGACCACAAGGATGCACACATTTATGCTCAGAACCTTGTCATCCTGCACCATGTAGCCCTTGCAAACAATTAGTTAAAATTTTATGTTATTGTGGTATAAGCACTTTATATCATAGATGCTTTGAATTAACATCGGCTAAAGCTGAAAGACGTAATGAATTGTTCAAATGCGGGAATCAATGCCCCAAAAATTATCCTTGTGGACATCGATGTATAAACGATTGTCATCCTGGTCCATGCAAGAATGAAAAGGAATGCAACAAGAAGGTGAAGCTGTTTTGCTTGTGCAGACGTATTAAGAAAGATTTTATCTGTTCCGTGGTGCAGAAAGAGGAAATTTGTATAAAATGCGATGATATTTGTGCCAAACTAATAAACGAAAAACGTCAAGCCGAAGCTGCTTTATTAGAACAAAAGCGGCAAGCTGAAGAAATACGTAATCAACAAGAAATAGAGAAATTTGAACGAAAATTTAAACCCCGTCGCAAGGGAAAGGATAAATTTGATAAAAAACAATTACAAAATGAGACATGTAATAATTATAGAAAATATTGGATTTTAGGCATTTTAATATGTACAATAGGTATAGTAATATTTTACATGACTGCTCAACAATTATGA
Protein Sequence
MQKFRQAQAENKIAINKHLEANAYLESSSEDEDDRNEEDIQNIVGKVISAYQGREADAEKILSYLINIFQSGNAVCLICISTVKRADPIWNCNKCFAFLHLSCILHWIQDSLNIKREKGITSIWACPKCRMEYNQDDIPRNYKCFCKKTIDPPYSPWNIPHSCGETCDKLLQPECGHKCVLLCHPGPCPPCAKTVSIKCYCGKQMPQQRRCNAKEWSCGTECNKEYKLCSHTCKEVCHSGECPPCPEILSLECHCKSNKELKQCSEGLWTCNKICGRPLSCNVHICQSKCHLIGDCGPCPLEKNRTCPCGKKRYAISCKQEQLPTCGDTCGKLLNCGSHYCNMRCHTDRCGQCLEVVTKSCRCGSYQKEIACGKEFHCNKKCMQMRLCGRHLCNKKCCDCLIKNTYNVCEKVCDNALNCRKHKCAAPCHSGPCYPCARTDVIQCRCGYNKITVPCGTVKKIKPPSCNKPCKIPPICHHPKRETHKCHQGHCPPCKKICDMVYKRCGHSCAAVCHTKIWLKVSKNDIKTQPAGPWDIQKETYQLKTLPCPPCQVSVQVTCLGGHETRPWPCHMARPTSCGRLCGKTLLCTNHTCELICHKIPSCEENKNGTPCMECEKPCLLPRPQGCTHLCSEPCHPAPCSPCKQLVKILCYCGISTLYHRCFELTSAKAERRNELFKCGNQCPKNYPCGHRCINDCHPGPCKNEKECNKKVKLFCLCRRIKKDFICSVVQKEEICIKCDDICAKLINEKRQAEAALLEQKRQAEEIRNQQEIEKFERKFKPRRKGKDKFDKKQLQNETCNNYRKYWILGILICTIGIVIFYMTAQQL