Ador005622.1
Basic Information
- Insect
- Apis dorsata
- Gene Symbol
- nfxl1
- Assembly
- GCA_000469605.1
- Location
- NW:939538-942486[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.1 5e+03 -3.2 1.1 15 19 126 130 125 130 0.81 2 19 0.14 6.8e+02 -0.5 0.8 4 10 161 167 160 167 0.95 3 19 5.6e-08 0.00026 20.0 15.1 1 18 175 191 175 192 0.98 4 19 1.1e-08 5e-05 22.3 14.0 1 19 229 246 229 246 0.94 5 19 0.29 1.4e+03 -1.4 0.3 5 10 270 275 270 277 0.90 6 19 0.017 80 2.5 8.0 1 18 281 299 281 300 0.90 7 19 0.00019 0.87 8.8 8.0 1 18 336 353 336 354 0.96 8 19 0.0068 32 3.8 7.6 1 12 388 399 388 399 0.94 9 19 1.9 8.7e+03 -4.0 1.3 6 10 409 413 409 413 0.96 10 19 7.7e-08 0.00036 19.6 12.0 1 18 419 436 419 437 0.92 11 19 0.0001 0.49 9.6 9.8 9 19 485 495 483 495 0.90 12 19 0.016 76 2.6 4.8 1 12 505 515 505 515 0.95 13 19 0.85 4e+03 -2.9 5.8 14 18 547 551 547 552 0.89 14 19 0.0027 12 5.1 7.8 1 12 588 599 578 599 0.82 15 19 2 9.4e+03 -4.4 3.8 6 10 615 619 611 619 0.71 16 19 0.005 23 4.2 16.4 4 19 629 644 627 644 0.91 17 19 2 9.4e+03 -6.1 2.9 9 13 650 654 650 654 0.74 18 19 1.1e-05 0.049 12.8 11.7 1 16 689 703 689 709 0.90 19 19 0.72 3.4e+03 -2.7 0.4 5 10 738 743 738 743 0.92
Sequence Information
- Coding Sequence
- atgcaaaaatttaaacgagctcaagcagaaaataaaatagcaattaataaacatttagaAGCAAATGCCTATTTAGAATCATCTAGTGAAGatgaaaatgatagaaatgaaGAAGATATGCAGAATGTAGTCGAAAAGGTTTTAGCTTCTTATCAAGGAAAAGAAGCAGATGCagaaaaaatgttatcatatttaattaatattttccaatctgGCAATGCTGTTTGcttaatatgtatttcaaCCATAAAAAAAGCAGATccgatTTGGAACTGTAACAAATGTTTTGCTTTTTTACATCTGTCTTGCATTTTGCATTGGATACAggatagtttaaatattaaacgtgAAAAAGGCATTACATTGATATGGGCATGTCCAAAATGTCGTATGGAATATAAGCAAGATGATGTACCTCGTAATTATAAGTGCTTTTGTGGAAAATCTATTGATCCACCATATCATCCATGGAATATTCCACATTCGTGTGGAGAAACTTGTGGTAAATCCTTAAAACCAGAATGTGGTCACAAATGTGTTTTACTTTGTCATCCTGGGCCATGTCCTCCTTGTGCAAAAACAGTATCTATCAAATGCTATTGTGGCAAACAAATGCCTCAACAACGACGATGTAATGCTAAAGAATGGAGCTGTGGCActatatgcaataaaaaatataaattatgttcacATACTTGCAAGGAAATATGCCATTCAGGAGAATGTCCACCTTGttcaaaagtattattattggaatgtCACTGTAAGATTaacaaagaattaaaacaatGCTATGAAAGTTCATGGACTTGTGATAAACCTTGCGGCAGACTTCTTTCTTGTAATGTTCATACATGCTTAGGTAAATGTCATTTAGTTAATGATTGTGGATCTTGTTTATTGGAACAAAATAGAACATGTCCATGTGGAAAAAAACGTTATGCCATTTCATGCAAACAAGAACAATTACCTACATGTGGAGATACAtgtggaaaattattgaattgtgGTTCACATTACTGCAATATGAGATGTCATATAGATCGGTGTGGACAATGTTTAGAGGTAGTCACAAAATCATGTAGATGTGgcaattatcaaaaagaaattgcatGTGGTAAAGAATTTCATTGCAATAAGAAATGCACGCAAATGCGTTTGTGCGGTAGACATTTATGCAACAAAAAATGTTGTGAttgcttaattaaaaatacatataatatttgtgaaaaaatatgtgaaaatacTTTAAACTGCCGCAAACATAAATGTGCCGCTCCTTGTCATAGTGGTCCTTGTTATCCGTGTGCACGAACTGATATTATTCAGTGTAAATGcggatacaataaaataatagtaccATGTggtacgataaaaaaaatcaaacctCCAGCTTGCAATAAATCATGTAAAATACCGCCAATTTGCCATCATCCAAAACGAGAAACTCACAAATGTCATCAAGGTCCTTGTCCAccttgcaaaaaaatttgcaacttAGTATATAAACGATGTGGTCATCTTTGTGTCGCTATTTGTCACACAAAAGTATgggtaaaagtatataaaaatgatacaaagATACAACCAACTGGACCTTGggatatacaaaaagaaactATGCAGCTAAAAACATTACCTTGTCCACCATGTGAAGTTTCAGTACCAATTACATGTTTAGGAGAACACGAGACACGTCCGTGGCCTTGTCATATGGCTAAATCTACTTCTTGTGGAAGATTATGTGGGAAAATATTATCATGTATGAATCAtacatgtaaattaatttgtcataaaatatcattttctaaaGAAGATATAAGTGGTACTCCATGCATGGAATGTGAAAAACCATGTCTATTTCCACGACCACAAGGCTGCACGCATTTATGTCCGAAACCTTGTCATCCTGCACCATGTAGTCCCTGCaagcaattaattaaaattttatgtcacTGTGGTATAAGTACTTTATACCGCAGATGTTCAGAACTTACATCAGCTAAAGCAGAACAACGTAATGAATTGCTTAAATGTGGAAATCAATGtccaaaaaattaTTCTTGTGGACATCGATGTATAAATGATTGTCATCCAGGTCCAtgtaagaatgaaaaaaaatgcaataagaAAGTGAAACTATTTTGTGAATGCAAACGTattaagaaagattttatttgttcattgatacaaaaagatgaaatttgcataaaatgtGACGATGTttgtaacaaattaaaaatagaaaaacgtCAAGCTGAGGCTGCTTTATTAGAACAAAAACGGCAAGCAGAAGAAATACGTAATCAACAAGAAATCGAAAAGtttgaacgaaaatttaaaccTCGTCGTAAAGGAAaagataaattcgataaaagacaattattgaatgaaaattgtaataattatagaaaatattggattttagccattttaatatgttttataggtattggaatattttgtgcaagcattcaaaaattttaa
- Protein Sequence
- MQKFKRAQAENKIAINKHLEANAYLESSSEDENDRNEEDMQNVVEKVLASYQGKEADAEKMLSYLINIFQSGNAVCLICISTIKKADPIWNCNKCFAFLHLSCILHWIQDSLNIKREKGITLIWACPKCRMEYKQDDVPRNYKCFCGKSIDPPYHPWNIPHSCGETCGKSLKPECGHKCVLLCHPGPCPPCAKTVSIKCYCGKQMPQQRRCNAKEWSCGTICNKKYKLCSHTCKEICHSGECPPCSKVLLLECHCKINKELKQCYESSWTCDKPCGRLLSCNVHTCLGKCHLVNDCGSCLLEQNRTCPCGKKRYAISCKQEQLPTCGDTCGKLLNCGSHYCNMRCHIDRCGQCLEVVTKSCRCGNYQKEIACGKEFHCNKKCTQMRLCGRHLCNKKCCDCLIKNTYNICEKICENTLNCRKHKCAAPCHSGPCYPCARTDIIQCKCGYNKIIVPCGTIKKIKPPACNKSCKIPPICHHPKRETHKCHQGPCPPCKKICNLVYKRCGHLCVAICHTKVWVKVYKNDTKIQPTGPWDIQKETMQLKTLPCPPCEVSVPITCLGEHETRPWPCHMAKSTSCGRLCGKILSCMNHTCKLICHKISFSKEDISGTPCMECEKPCLFPRPQGCTHLCPKPCHPAPCSPCKQLIKILCHCGISTLYRRCSELTSAKAEQRNELLKCGNQCPKNYSCGHRCINDCHPGPCKNEKKCNKKVKLFCECKRIKKDFICSLIQKDEICIKCDDVCNKLKIEKRQAEAALLEQKRQAEEIRNQQEIEKFERKFKPRRKGKDKFDKRQLLNENCNNYRKYWILAILICFIGIGIFCASIQKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00217442;
- 90% Identity
- iTF_00142177; iTF_00142773; iTF_00140960;
- 80% Identity
- -