Bpyr009729.1
Basic Information
- Insect
- Bombus pyrosoma
- Gene Symbol
- nfxl1
- Assembly
- GCA_014825855.1
- Location
- CM026135.1:6949000-6951752[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.1 1e+04 -3.2 1.1 15 19 126 130 125 130 0.81 2 19 0.14 1.4e+03 -0.5 0.8 4 10 161 167 160 167 0.95 3 19 5.6e-08 0.00055 20.0 15.1 1 18 175 191 175 192 0.98 4 19 1e-08 0.0001 22.4 16.0 1 19 229 246 229 246 0.95 5 19 0.24 2.3e+03 -1.1 0.3 5 10 270 275 270 276 0.95 6 19 6.6e-05 0.65 10.2 10.9 1 19 281 300 281 300 0.91 7 19 0.00036 3.6 7.8 7.9 1 18 336 353 336 354 0.96 8 19 0.0068 67 3.8 7.6 1 12 388 399 388 399 0.94 9 19 1.2 1.2e+04 -3.4 1.7 6 10 409 413 409 413 0.97 10 19 7.7e-08 0.00076 19.6 12.0 1 18 419 436 419 437 0.92 11 19 1.1 1.1e+04 -3.3 0.7 6 10 466 470 465 470 0.85 12 19 0.0021 20 5.4 10.5 9 19 485 495 483 495 0.90 13 19 0.0025 25 5.2 6.2 1 12 505 515 505 515 0.95 14 19 0.85 8.4e+03 -2.9 5.8 14 18 547 551 547 552 0.89 15 19 0.001 9.9 6.4 8.7 1 12 588 599 578 599 0.91 16 19 2 2e+04 -4.4 3.8 6 10 615 619 611 619 0.71 17 19 0.0011 11 6.3 15.0 4 19 629 644 627 644 0.91 18 19 0.12 1.2e+03 -0.2 0.2 3 9 659 665 653 665 0.67 19 19 9.2e-06 0.091 12.9 11.7 1 16 689 703 689 709 0.88
Sequence Information
- Coding Sequence
- ATGCAGAAATTTAGACAAGCTCAAGCAGAAAATAAAATAGCAATTAATAAACATTTAGAAGCAAATGCTTATCTAGAATCTTCCAGTGAGGATGAAGATGATAGAAATGAAGAGGATATACAAAATATAGTTGGAAAAGTAATATCTGCCTACCAAGGCAAAGAGGCAGATGCAGAAAAAATTTTATCATATTTAATTAATATTTTTCAATCTGGCAATGCTGTTTGTTTAATATGTATTTCAACTGTAAAAAGAGTAGATCCAATTTGGAATTGTAACAAGTGTTTTGCTTTCCTACATCTGTCTTGCATTTTGCATTGGATACAGGATAGTTTGAATGTTAAACGCGAGAAAGGTATCACATCAATATGGGCATGTCCAAAATGTCGTATGGAATATAATCAAGATGATATTCCTCGTAACTATAAATGCTTTTGTAAAAAAACCATAGATCCCCCATATAGTCCATGGAATATTCCACATTCCTGTGGAGAAACATGCGACAAACTGCTGCAACCAGAATGTGGTCACAAATGTGTTTTGCTTTGCCATCCTGGACCATGTCCTCCTTGTGCAAAGACGGTATCTATTAAATGCTACTGTGGCAAACAGATGCCTCAACAACGACGATGCAATGCCAAAGAATGGAGTTGTGGTACTGAATGTAACAAAGAGTATAAGTTATGTTCACATACTTGCAAAGAAGTGTGTCACTCAGGGGAATGTCCTCCTTGTCCAGAAATATTATTACTAGAATGCCACTGTAAGAGTAACAAAGAATTAAAGCAATGCTCTGAAGGTCTATGGACTTGTAATAAACTTTGTGGCAGACCTCTTTCTTGTAATGTTCACATATGTCAAAGTAAATGTCATTTAATTGGTGACTGTGGACCCTGTCCATCGGAGAAGAATAGAACATGTCCGTGTGGGAAAAAACGTTATGCCATTTCTTGCAAACAAGAACAGCTACCCACATGTGGAGATACATGTGGAAAATTATTAAATTGCAGTTCGCATTATTGTAATATGAGATGTCATACAGATCGTTGTGGGCAGTGTTTAGAGGTAGTCACAAAATCGTGTAGATGTGGCAGCTATCAGAAAGAAATTGCATGTGGCAAAGAATTTCATTGCAATAAAAAGTGCATGCAAATGCGGTTGTGCGGAAGACATTTGTGTAATAAGAAATGCTGCGACTGCTTGATTAAAAACACGTATAACGTGTGCGAAAAAGTATGCGATAATGCTTTAAACTGCCGCAAACATAAATGTGCTGCTCCTTGTCATAGTGGCCCTTGTTATCCGTGCGCACGAACTGACGTTATTCAATGTAGATGCGGATATAATAAGATAACGGTACCATGTGGCACGGTAAAAAAGATCAAGCCACCAGCTTGCAATAAGCCATGTAAAATACCTCCGATTTGCCATCATCCCAAACGAGAAACTCACAAATGCCATCAAGGTCACTGTCCACCTTGCAAAAAGATTTGCGGCATGGTATATAAACGATGTGGTCATTCTTGTGTAGCTGTTTGCCACACAAAAGTGTGGCTAAAGGTAAGCAAAAATGACATAAAGACGCAACCAGCAGGACCATGGGACATACAAAAGGAAACTTATCAGCTAAAAACATTACCATGTCCACCATGTGAAGTTTCTGTACAAGTTACATGTTTAGGAGGACATGAAACACGTCCATGGCCTTGTCACATGGCTAGACCTACATCTTGCGGAAGATTGTGCGGGAAAACGTTATTATGCACGAATCATACATGCGAATTGATTTGTCATAAAATACCATCATCTGAAGAAAATAAGAATGGTACCCCGTGTATGGAGTGTGAAAAACCATGTTTACTTCCACGACCACAGGGATGCACACATTTATGCTCAGAACCTTGTCATCCTGCACCATGTAGCCCTTGCAAACAATTAGTTAAAATTTCATGCCATTGTGGTATAAGCACTTTATATCATAGATGTTCTGAATTAACATCGGCTAAAGCTGAGAGACGTAATGAATTGCTCAAATGCGGGAATCAATGCCCCAAAAATTATCCTTGTGGACATCGATGTATAAATGATTGTCATCCTGGTCCATGCAAGAATGAAAAGGAATGCAACAAGAAGGTGAAGCTGTTTTGCGTGTGCAGACGTATTAAGAAAGATTTTATTTGTTCTGTGGTGCAGAAAGAGGAAATTTGTATAAAATGCGATGATATTTGTGCCAAACTAATAAACGAAAAACGTCAAGCTGAAGCTGCTTTATTAGAACAAAAGCGGCAAGCCGAAGAAATACGTAATCAACAAGAAATAGAGAAATTTGAACGAAAATTTAAACCCCGTCGCAAAGGAAAGGATAAATTCGATAAAAAACAATTACAAAATGAGACATGTAATAATTATAGAAAATATTGGATTTTAGGCATTTTAATATGTACAATAGGTATAGTAATATTTTACATGACTGCTCAACAATTGTGA
- Protein Sequence
- MQKFRQAQAENKIAINKHLEANAYLESSSEDEDDRNEEDIQNIVGKVISAYQGKEADAEKILSYLINIFQSGNAVCLICISTVKRVDPIWNCNKCFAFLHLSCILHWIQDSLNVKREKGITSIWACPKCRMEYNQDDIPRNYKCFCKKTIDPPYSPWNIPHSCGETCDKLLQPECGHKCVLLCHPGPCPPCAKTVSIKCYCGKQMPQQRRCNAKEWSCGTECNKEYKLCSHTCKEVCHSGECPPCPEILLLECHCKSNKELKQCSEGLWTCNKLCGRPLSCNVHICQSKCHLIGDCGPCPSEKNRTCPCGKKRYAISCKQEQLPTCGDTCGKLLNCSSHYCNMRCHTDRCGQCLEVVTKSCRCGSYQKEIACGKEFHCNKKCMQMRLCGRHLCNKKCCDCLIKNTYNVCEKVCDNALNCRKHKCAAPCHSGPCYPCARTDVIQCRCGYNKITVPCGTVKKIKPPACNKPCKIPPICHHPKRETHKCHQGHCPPCKKICGMVYKRCGHSCVAVCHTKVWLKVSKNDIKTQPAGPWDIQKETYQLKTLPCPPCEVSVQVTCLGGHETRPWPCHMARPTSCGRLCGKTLLCTNHTCELICHKIPSSEENKNGTPCMECEKPCLLPRPQGCTHLCSEPCHPAPCSPCKQLVKISCHCGISTLYHRCSELTSAKAERRNELLKCGNQCPKNYPCGHRCINDCHPGPCKNEKECNKKVKLFCVCRRIKKDFICSVVQKEEICIKCDDICAKLINEKRQAEAALLEQKRQAEEIRNQQEIEKFERKFKPRRKGKDKFDKKQLQNETCNNYRKYWILGILICTIGIVIFYMTAQQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00217442;
- 90% Identity
- iTF_00217442;
- 80% Identity
- -