Basic Information

Insect: Bombus pascuorum
Gene Symbol: nfxl1
Assembly: GCA_905332965.1
Location: HG995272.1:7178688-7181489[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.1 1.2e+04 -3.2 1.1 15 19 126 130 125 130 0.81

2 20 0.031 3.5e+02 1.7 1.9 4 10 161 167 160 167 0.97

3 20 5.6e-08 0.00063 20.0 15.1 1 18 175 191 175 192 0.98

4 20 1e-08 0.00012 22.4 16.0 1 19 229 246 229 246 0.95

5 20 0.33 3.7e+03 -1.6 0.3 5 10 270 275 270 277 0.93

6 20 6.6e-05 0.75 10.2 10.9 1 19 281 300 281 300 0.91

7 20 4.1e-05 0.47 10.9 9.2 1 18 336 353 336 354 0.97

8 20 0.0024 27 5.2 8.7 1 12 388 399 388 399 0.94

9 20 1.2 1.4e+04 -3.4 1.7 6 10 409 413 409 413 0.97

10 20 7.7e-08 0.00087 19.6 12.0 1 18 419 436 419 437 0.92

11 20 0.95 1.1e+04 -3.1 0.8 6 10 466 470 465 470 0.85

12 20 0.0021 23 5.4 10.5 9 19 485 495 483 495 0.90

13 20 0.0025 28 5.2 6.2 1 12 505 515 505 515 0.95

14 20 0.85 9.7e+03 -2.9 5.8 14 18 547 551 547 552 0.89

15 20 0.25 2.8e+03 -1.2 0.3 6 10 578 582 577 584 0.89

16 20 0.00019 2.1 8.7 6.1 1 12 588 599 588 599 0.95

17 20 2 2.3e+04 -4.4 3.8 6 10 615 619 611 619 0.71

18 20 0.0011 13 6.3 15.0 4 19 629 644 627 644 0.91

19 20 1.1 1.2e+04 -3.2 0.2 3 6 659 662 653 664 0.62

20 20 9.2e-06 0.1 12.9 11.7 1 16 689 703 689 709 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.1	1.2e+04	-3.2	1.1	15	19	126	130	125	130	0.81
2	20	0.031	3.5e+02	1.7	1.9	4	10	161	167	160	167	0.97
3	20	5.6e-08	0.00063	20.0	15.1	1	18	175	191	175	192	0.98
4	20	1e-08	0.00012	22.4	16.0	1	19	229	246	229	246	0.95
5	20	0.33	3.7e+03	-1.6	0.3	5	10	270	275	270	277	0.93
6	20	6.6e-05	0.75	10.2	10.9	1	19	281	300	281	300	0.91
7	20	4.1e-05	0.47	10.9	9.2	1	18	336	353	336	354	0.97
8	20	0.0024	27	5.2	8.7	1	12	388	399	388	399	0.94
9	20	1.2	1.4e+04	-3.4	1.7	6	10	409	413	409	413	0.97
10	20	7.7e-08	0.00087	19.6	12.0	1	18	419	436	419	437	0.92
11	20	0.95	1.1e+04	-3.1	0.8	6	10	466	470	465	470	0.85
12	20	0.0021	23	5.4	10.5	9	19	485	495	483	495	0.90
13	20	0.0025	28	5.2	6.2	1	12	505	515	505	515	0.95
14	20	0.85	9.7e+03	-2.9	5.8	14	18	547	551	547	552	0.89
15	20	0.25	2.8e+03	-1.2	0.3	6	10	578	582	577	584	0.89
16	20	0.00019	2.1	8.7	6.1	1	12	588	599	588	599	0.95
17	20	2	2.3e+04	-4.4	3.8	6	10	615	619	611	619	0.71
18	20	0.0011	13	6.3	15.0	4	19	629	644	627	644	0.91
19	20	1.1	1.2e+04	-3.2	0.2	3	6	659	662	653	664	0.62
20	20	9.2e-06	0.1	12.9	11.7	1	16	689	703	689	709	0.88

Sequence Information

Coding Sequence: ATGCAGAAATTTAGGCAAGCTCAAGCAGAAAATAAAATAGCAATTAACAAACATTTAGAAGCAAATGCTTATCTAGAATCTTCCAGTGAGAGTGAAGATGATAGAAATGAAGAGGATATACAAAATATAGTGGGAAAAGTAATATCTGCCTATCAAGGCAAAGAGGCAGACACAGAAAAAATTTTATCATATTTAATTAATATTTTCCAATCTGGCAATGCTGTTTGTTTAATATGTATTTCAACTGTAAAAAGAACAGATTCAATTTGGAATTGTAACAAGTGTTTTGCTTTCCTACATATGCCTTGCATTTTGCATTGGATAAACGATAGTTTGAATGTTAAACGCGAGAAAGGTATCACATCAATATGGGCATGTCCAAAATGTCGTATGGAATATAATCAAGATGACATTCCTCGTAACTATAAATGCTTTTGTAAAAAAACCATAGATCCCCCATATAGTCCATGGAATATTCCACATTCCTGTGAAGAAACATGTGACAAACTGCTGCAACCAGAATGTGGTCACAAATGTGTTTTGCTTTGCCATCCTGGACCATGTCCTCCTTGTGCAAAGACGGTATCTATTAAATGCTACTGTGGCAAACAGATGCCTCAACAACGACGATGTAATGCCAAAGAATGGAGTTGTGGTACTGAATGTAACAAAGAGTATAAGTTATGTTCACACACTTGCAAAGAAGTGTGTCACTCAGGGGAATGTCCTCCTTGTCCAGAAATATTATCACTAGAATGTCACTGTAAGAGTAACAAAGAATTAAAGCAATGCTCTGAAGGTCTATGGACTTGTAATAAAATTTGTGGCAGACCTCTTTCTTGTAATGTTCACATATGTCAAAGTAAATGTCATTTAATTGGCGACTGTGGACCCTGTCCATTGGAGAAGAATAGAACATGTCCATGTGGGAAAAAACGTTATGCTATTTCTTGCAAACAAGAACAGCTACCTACATGTGGAGATACATGTGGAAAATTATTAGATTGCGGTTCGCATTATTGTAATATGAGATGTCATACAGATCGTTGCGGGCAGTGTTTAGAGGTAGTCAAAAAATCGTGTAGATGTGGCAGCTACCAGAAAGAAATTGCATGTGGTAAAGAATTTCATTGCAATAAAAAATGCATGCAAATGCGGTTATGCGGAAAACATTCGTGTAATAAGAAGTGCTGCGACTGCTTGATTAAAAACACATATAACGTGTGCGAAAAAGTATGCGATAATGTTTTAAACTGCCGCAAACACAAATGTGCTGCTCCTTGTCATAGCGGCCCTTGTTATCCGTGCGCACGAACTGACGTTATTCAATGTAGATGCGGATATAATAAGATAACAGTACCATGTGGTATGGTAAAAAAGATCAAGCCACTATCTTGCAATAAGCCATGTAAAATACCTCCGATTTGTCATCATCTCAAACGAGAAACTCACAAATGCCATCAAGGTCACTGTCCACCTTGCAAAAAGATTTGCGACATTGTATATAAACGATGTGGTCATTCTTGTGTAGCTGTTTGTCACACAAAAGTGTGGCAAAAGGTGAGCAAAAATGACATAAAGACACAACCAGCAGGACCATGGGACATACAAAAGGAAACTTATCAGCTAAAAACATTACCATGTCCACCATGTGAAGTTTCTGTACAAGTTACATGTTTAGGAGGACATGAAACGCGTCCATGGCCTTGTCACATGGCTAGACCTACGTCTTGCGAAAGATTGTGCGGAAAAACGTTATTATGCACGAATCATACATGCGAATTGATTTGTCATAAAATACCATCTTCTGAAGAAAATAAGAATAGTACCCCGTGTATGGAGTGTGAAAAACCATGTTTACTGCCACGACCACAAGGATGCACACATTTATGCTCAGAACCTTGTCATCCTGCACCATGTAGCCCTTGCAAACAATTAGTTAAAATTTCATGCCATTGTGGTATAAGCACTTTATATCATAGATGTTTTGAATTAACATCGGCTGAAGCTAAAAGACGTAATGAATTGTTCAAATGCGGGAATCAATGCCCCAAAAATTATCCTTGTGGACATCGATGTATAAATGATTGTCATCCTGGTCCATGCAAGAATGAAAAGGAATGCAACAAGAAGGTGAAGCTGTTCTGCGTGTGCAGGCGTATTAAGAAAGATTTTATCTGTTCCGTGGTGCAGAAAGAGGAAATTTGTTTAAAATGCGATGATATTTGTGCCAAACTAATAAACGAAAAACGTCAAGCCGAAGCTGCTTTATTAGAGCAAAAGCGGCAAGCTGAAGAAATACGTAATCAACAAGAAATAGAGAAATTTGAACGAAAATTTAAACCCCGTCGTAAGGGAAAGGATAAATTCGATAAAAAACAATTACAAAATGAGACATGTAATAATTATAGAAAATATTGGATTTTAGGTATTTTAATATGTACAATAGGTATAGTAATATTTTACATGACTGCTCAACAATTGTGA
Protein Sequence: MQKFRQAQAENKIAINKHLEANAYLESSSESEDDRNEEDIQNIVGKVISAYQGKEADTEKILSYLINIFQSGNAVCLICISTVKRTDSIWNCNKCFAFLHMPCILHWINDSLNVKREKGITSIWACPKCRMEYNQDDIPRNYKCFCKKTIDPPYSPWNIPHSCEETCDKLLQPECGHKCVLLCHPGPCPPCAKTVSIKCYCGKQMPQQRRCNAKEWSCGTECNKEYKLCSHTCKEVCHSGECPPCPEILSLECHCKSNKELKQCSEGLWTCNKICGRPLSCNVHICQSKCHLIGDCGPCPLEKNRTCPCGKKRYAISCKQEQLPTCGDTCGKLLDCGSHYCNMRCHTDRCGQCLEVVKKSCRCGSYQKEIACGKEFHCNKKCMQMRLCGKHSCNKKCCDCLIKNTYNVCEKVCDNVLNCRKHKCAAPCHSGPCYPCARTDVIQCRCGYNKITVPCGMVKKIKPLSCNKPCKIPPICHHLKRETHKCHQGHCPPCKKICDIVYKRCGHSCVAVCHTKVWQKVSKNDIKTQPAGPWDIQKETYQLKTLPCPPCEVSVQVTCLGGHETRPWPCHMARPTSCERLCGKTLLCTNHTCELICHKIPSSEENKNSTPCMECEKPCLLPRPQGCTHLCSEPCHPAPCSPCKQLVKISCHCGISTLYHRCFELTSAEAKRRNELFKCGNQCPKNYPCGHRCINDCHPGPCKNEKECNKKVKLFCVCRRIKKDFICSVVQKEEICLKCDDICAKLINEKRQAEAALLEQKRQAEEIRNQQEIEKFERKFKPRRKGKDKFDKKQLQNETCNNYRKYWILGILICTIGIVIFYMTAQQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00217442;
90% Identity: iTF_00217442;
80% Identity: -