Basic Information

Insect: Osmia lignaria
Gene Symbol: nfxl1
Assembly: GCA_012274295.1
Location: NW:710197-713327[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.1 5.3e+03 -3.2 1.1 15 19 126 130 125 130 0.81

2 18 0.14 7.2e+02 -0.5 0.8 4 10 161 167 160 167 0.95

3 18 2.4e-07 0.0012 18.0 17.1 1 18 175 191 175 192 0.98

4 18 3.1e-07 0.0015 17.7 16.0 1 18 229 245 229 246 0.95

5 18 5.8e-05 0.29 10.4 11.7 1 19 281 300 281 300 0.92

6 18 4.9e-05 0.24 10.6 9.5 1 18 336 353 336 354 0.97

7 18 0.0068 34 3.8 7.6 1 12 388 399 388 399 0.94

8 18 1.9 9.2e+03 -4.0 1.3 6 10 409 413 409 413 0.96

9 18 1.1e-07 0.00055 19.1 13.4 1 18 419 436 419 437 0.91

10 18 1.1 5.4e+03 -3.3 0.7 6 10 466 470 465 470 0.85

11 18 0.0001 0.51 9.6 9.8 9 19 485 495 483 495 0.90

12 18 0.0025 12 5.2 6.2 1 12 505 515 505 515 0.95

13 18 1.7 8.6e+03 -3.9 3.1 14 18 547 551 547 552 0.87

14 18 0.017 83 2.5 8.1 1 12 588 599 578 599 0.91

15 18 2 9.9e+03 -4.4 3.8 6 10 615 619 611 619 0.71

16 18 0.005 25 4.2 16.4 4 19 629 644 627 644 0.91

17 18 7.5e-06 0.037 13.2 11.0 1 16 689 703 689 709 0.90

18 18 0.68 3.4e+03 -2.6 0.7 5 10 738 743 738 743 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.1	5.3e+03	-3.2	1.1	15	19	126	130	125	130	0.81
2	18	0.14	7.2e+02	-0.5	0.8	4	10	161	167	160	167	0.95
3	18	2.4e-07	0.0012	18.0	17.1	1	18	175	191	175	192	0.98
4	18	3.1e-07	0.0015	17.7	16.0	1	18	229	245	229	246	0.95
5	18	5.8e-05	0.29	10.4	11.7	1	19	281	300	281	300	0.92
6	18	4.9e-05	0.24	10.6	9.5	1	18	336	353	336	354	0.97
7	18	0.0068	34	3.8	7.6	1	12	388	399	388	399	0.94
8	18	1.9	9.2e+03	-4.0	1.3	6	10	409	413	409	413	0.96
9	18	1.1e-07	0.00055	19.1	13.4	1	18	419	436	419	437	0.91
10	18	1.1	5.4e+03	-3.3	0.7	6	10	466	470	465	470	0.85
11	18	0.0001	0.51	9.6	9.8	9	19	485	495	483	495	0.90
12	18	0.0025	12	5.2	6.2	1	12	505	515	505	515	0.95
13	18	1.7	8.6e+03	-3.9	3.1	14	18	547	551	547	552	0.87
14	18	0.017	83	2.5	8.1	1	12	588	599	578	599	0.91
15	18	2	9.9e+03	-4.4	3.8	6	10	615	619	611	619	0.71
16	18	0.005	25	4.2	16.4	4	19	629	644	627	644	0.91
17	18	7.5e-06	0.037	13.2	11.0	1	16	689	703	689	709	0.90
18	18	0.68	3.4e+03	-2.6	0.7	5	10	738	743	738	743	0.93

Sequence Information

Coding Sequence: atgcaaaaatttaGACGAGCTcaagcagaaaataaaatagcaatTAATAAGCATTTAGAAGCTAATGCCTATTTAGAATCATCCAGCGAGGATGAGGATGATAGAAATGAAGAAGATATGCAAAATGTGGTTGAAAAGGTGCTATCCGCTTATCAAGGAAGAGAGGCAGAttcagaaaaaattttatcatatttaattaatatttttcaatctgGTAGTGCTGTTTGCTTGATATGTATTTCAACTATAAAGAAAGCAGATGCGatttgGAACTGCAATAAATGTTAtgcatttttacatttatcatGCATTTTGCATTGGATACGGGATAGTTTAAATGTTAAACATGAAAAAGGTATCGCACCAGTATGGGCATGTCCAAAATGTCGCACAGAATACGAACAAGACGAAGTTCCTcgtaattataaatgtttctgTAAAAAAGTCGTGGATCCTTCTTATTATCCATGGAATATTCCACATTCTTGTGGAGAAACTTGTGGAAAAGCTTTGCAACCGGAGTGCGGTCACAAATGTGTATTACTTTGTCATCCAGGACCATGTCCTCCTTGCGGAAAAACAATATCGATAAGCTGTTATTGCGGCAAACAAGTGCCACAGCCACGACGATGCAATGCAAAAGAATGGAGCTGTGATACCGTATgcgataaaaaatataaactatgCTCGCATAGTTGCAAGCAAGTGTGTCACACAGGTGAATGCCCTCCTTGTGGAGAAGCGTTATTGATAGAGTGTCATTGCAAGagtaagaaagaaatgaagcAATGCTTTGAAGGCTCGTGGATTTGCGACATACCCTGTCGTAGAGCACTTTCATGTAACGTTCATATTTGCCAAAGCACCTGCCATTTACCTGGCGATTGTGGAAATTGTCCATTAGAGAAGAATAGGACTTGTCCTTGTGGAAAGAAACGATATGCGGTATCTTGCGAACAAGAACAGGTACCAACGTGTGGAGACACGTgtggaaaattattagagTGTGGCTCACATTATTGTAATATGAGATGTCATACAGATAAATGCGGTCAATGTTTAGAGGTAGTGAGGAAATCATGCCGTTGTGGTAGTtatcaaaaagaaattgcatGCGGTAAAGAATTCCATTGCAACAAGAAATGCACGCAAATGCGTCTATGTGGAAGACATTTATGCAATAAAAAATGCTGTGActgtttaatgaaaaacatatACAACGTATGCGAAAAGATATGCGACAACGCTTTAAACTGCCGTAAGCACAAGTGTTCTGCACCTTGTCACAGCGGTCCTTGTTATCCATGCGAGAGAACCGATATTATTCAATGTAGATGtggttataataaaataacaataccGTGTGGTacgatgaagaaaattaaaccaCCGGCATGTAATAAACCATGCAAGATACCGCCGATTTGTCATCACCTTAAAAGGGAAACTCACAAATGCCACCAAGGCCCTTGTCCACCttgcaaaaaaatttgtgGTTTGATATATAAAAGATGCGGCCATTCTTGCGTTGCTGTTTGTCATACAAAAGTTTGGGtaaaagtgaataaaaatgacgTGAAAACGCAACCCACAGGTCCATGGGATATACAGAAAGAAACTATGCAGCTTAAAACACTACCCTGTCCGGCATGTGAAGTATCTGTACCGGTAACTTGTTTAGGAGGTCATGAAATACGTCCATGGCCTTGTCATGCAGCTAAACCTACTTCTTGTGGAAGACTTTGCGGAAGAATATTACCTTGTACCAATCATAGATGCGAATTAGATTGCCATAAAGTAGCATCTTCTGAAGATGCAAAGAATAGCATTCCATGCATGGAATGTGAAAAGCCATGCTTGTTTCCACGACCGCAAGGCTGCACGCATTTATGTCCAAAACCATGTCATCCAGCGCCTTGTAGTCCTTGCAAGCAATTAGTCAAAATTTCATGCCATTGTGGTATAGGCACATTATATCGAAGGTGTTCTGAATTAACATCAGCTACGATCGAGCAACGTAATGAACTACTTAAATGTGGAAATCAGTGTccaaaaaatTATTCTTGTGGGCATAGATGCATGAATAATTGTCATCCTGGTCCATGCACAAATGAAAacgaatgtaataaaaaaataaaattattctgctCGTGCAAACGTATCAAGAAAGACTATATATGTTCGATGGTACAAAAGcaagaaatttctataaaatgcgatgaaatttgtattaagTTGAAGAATGAGAAGCGCCAAGCTGAAGCCGCATTATTAGAACAGAAACGACAAGTAGAGGAAATGCGTAATCAAGAAGAAATCAAGAAATTCGAACGAAAATTCAAATCTCGGCGTAAAGGAAAAGATAAATTTGATAGGAAACAATTCCATGAAGAGAcgtgtaataattatagaaaatgctggattttaactattttaataactttaataagtattttaatatattatgtaGGTATGGAGAAACTGTAA
Protein Sequence: MQKFRRAQAENKIAINKHLEANAYLESSSEDEDDRNEEDMQNVVEKVLSAYQGREADSEKILSYLINIFQSGSAVCLICISTIKKADAIWNCNKCYAFLHLSCILHWIRDSLNVKHEKGIAPVWACPKCRTEYEQDEVPRNYKCFCKKVVDPSYYPWNIPHSCGETCGKALQPECGHKCVLLCHPGPCPPCGKTISISCYCGKQVPQPRRCNAKEWSCDTVCDKKYKLCSHSCKQVCHTGECPPCGEALLIECHCKSKKEMKQCFEGSWICDIPCRRALSCNVHICQSTCHLPGDCGNCPLEKNRTCPCGKKRYAVSCEQEQVPTCGDTCGKLLECGSHYCNMRCHTDKCGQCLEVVRKSCRCGSYQKEIACGKEFHCNKKCTQMRLCGRHLCNKKCCDCLMKNIYNVCEKICDNALNCRKHKCSAPCHSGPCYPCERTDIIQCRCGYNKITIPCGTMKKIKPPACNKPCKIPPICHHLKRETHKCHQGPCPPCKKICGLIYKRCGHSCVAVCHTKVWVKVNKNDVKTQPTGPWDIQKETMQLKTLPCPACEVSVPVTCLGGHEIRPWPCHAAKPTSCGRLCGRILPCTNHRCELDCHKVASSEDAKNSIPCMECEKPCLFPRPQGCTHLCPKPCHPAPCSPCKQLVKISCHCGIGTLYRRCSELTSATIEQRNELLKCGNQCPKNYSCGHRCMNNCHPGPCTNENECNKKIKLFCSCKRIKKDYICSMVQKQEISIKCDEICIKLKNEKRQAEAALLEQKRQVEEMRNQEEIKKFERKFKSRRKGKDKFDRKQFHEETCNNYRKCWILTILITLISILIYYVGMEKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00217442;
90% Identity: iTF_01122772;
80% Identity: -