Epru017221.1
Basic Information
- Insect
- Eucera pruinosa
- Gene Symbol
- nfxl1
- Assembly
- GCA_028830335.1
- Location
- JAMYCR010000011.1:17913987-17917716[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.1 1.7e+04 -3.2 1.1 15 19 126 130 125 130 0.81 2 19 0.14 2.3e+03 -0.5 0.8 4 10 161 167 160 167 0.95 3 19 5.6e-08 0.00088 20.0 15.1 1 18 175 191 175 192 0.98 4 19 1.1e-06 0.018 15.9 14.6 4 19 231 246 229 246 0.94 5 19 1.5e-06 0.023 15.5 14.4 1 19 281 300 275 300 0.90 6 19 4.1e-05 0.65 10.9 9.2 1 18 336 353 336 354 0.97 7 19 0.0068 1.1e+02 3.8 7.6 1 12 388 399 388 399 0.94 8 19 1.9 3e+04 -4.0 1.6 6 10 409 413 409 413 0.95 9 19 7.9e-08 0.0013 19.5 12.5 1 18 419 436 419 437 0.92 10 19 1.7 2.6e+04 -3.9 1.3 6 10 466 470 465 470 0.76 11 19 0.0001 1.6 9.6 9.8 9 19 485 495 483 495 0.90 12 19 0.0013 20 6.1 5.1 1 11 505 514 505 515 0.95 13 19 0.85 1.4e+04 -2.9 5.8 14 18 547 551 547 552 0.89 14 19 0.00049 7.8 7.4 8.7 1 12 588 599 578 599 0.91 15 19 2 3.2e+04 -4.2 3.2 6 10 615 619 611 619 0.74 16 19 0.005 79 4.2 16.4 4 19 629 644 627 644 0.91 17 19 2 3.2e+04 -6.5 3.4 9 13 650 654 650 654 0.71 18 19 0.0026 40 5.1 9.1 1 16 689 703 689 709 0.87 19 19 0.72 1.1e+04 -2.7 0.4 5 10 738 743 738 743 0.92
Sequence Information
- Coding Sequence
- ATGCAGAAATTTAGGAGAGCTCAGGCAGAAAATAAGCTGGCAATCAACAAGCACTTGGAGGCAAATGCCTACTTGGAATCCTCCAGCGAGGATGAAGATGAAGGAAACGAGGAAGACTTGCAAAATGTTGTTGGAAAAGTGCTGTCTGCCTATCAGGGAAAAGAGGCGGATGCAGaaaaaattttatcttatttaatcaatatttttcaatcggGCAGTGCTGTCTGCCTGATATGTATTTCAACGGTGAAAAAAGCAGACCCAATCTGGAATTGCAGCAAATGCTTCGCGTTTCTGCATCTGTCTTGCATTTTGCATTGGATACAGGATAGCTTAAACGTCAGACGCGAGAAAGGCGTGACGCCGATATGGGCATGCCCAAAATGTCGCATGGAATACGGGCAAGATCAAGTTCCCCGAAAATACAAGTGCTTCTGCAGAAAGGTGATAGACCCACCTTATCAGCCCTGGAACATTCCACACTCTTGCGGAGAAACTTGCGGCAAAGCGTTGCAACCGGAATGCGGCCACAAATGCGTCCTGCTCTGCCATCCTGGCCCGTGTCCACCCTGCGCGAAAACTGTGTCGATGAAATGCTACTGCGGCAAACAGATGCCTCAGATGCGACGATGCAATGCCAAAGAATGGAGCTGCGGCACCGCGTGCAACAAAAGATACGAGCTGTGCCCTCATGCTTGCAGGGAAGTCTGTCACTCGGGGGAGTGCCCTCCTTGTTCCGAAGTGTTGCTGCTGGAGTGCCACTGCAAGAGTAGCAGGGAGCTGAAGCGATGCTCGGAAGGGTCGTGGATTTGCGACAAAGCCTGCGGGAAGCCGCTCTCTTGCAACGTTCACACATGCCAAAGCACCTGCCATTTAGCCGGCGATTGCGGGCCCTGCCCGTCAGAGAAGAATAGAACGTGCCCGTGCGGCAAGAAGCGGTACGCCGTTTCCTGCAGGCAGGAGCAATTGCCCACGTGCGGGGATACGTGCGGCAAATTGTTGGACTGCGGCTCGCACTACTGCAACATGAGATGTCACACGGATCGCTGCGGGCAATGCTTGGAGGTGGTGAGCAAGTCGTGCCGATGCGGCAGCTATAGAAAGGAGATCGCCTGCGGTAAGGAATTCCATTGCAACAAGAAGTGCATGCAGATGCGCTTGTGCGGCAGACACCTGTGCAACAAGAAGTGTTGCGACTGCCTCGTCAAGAACACGTACAACGTGTGCGAGAAGACGTGCGACAACGCTTTGAACTGTCGCAAGCACAAGTGTTCCGCGCCTTGCCACAGCGGGCCATGTTATCCCTGCGCGAGGACCGACGTCATTCAATGCAGATGCGGTTACAACAAGATAACGGTGCCGTGCGGCACGGTGAAAAAGATCAAGCCTCCGCCTTGCAACAAGCCGTGCAAAATACCGCCCATCTGCCACCATCCCAAGAGAGAAACTCACAAATGCCACCAAGGCCCTTGCCCGCCTTGCAAGAAGATTTGCGAGTTGGTGTACAAGCGATGCGGCCATTCCTGCGTCGCCGTTTGCCACGCCAAAGTCTACGTGAAGGTGAACAAGAGCGAGGCGAAAGCGCAACCGGCTGGCCCGTGGGACGTGCAAAAGGATATCGTGCAATTGAAGACGCTCCCGTGTCCACCGTGCGAGGTTTCCGTCCCGGTTACGTGCTTAGGGGGACACGAGACGCGGCCGTGGCCTTGTCACAATTCCAGGCCCACTTCTTGCGGACGGCTATGCGGGAGAACGTTGCCGTGCACCAATCATACGTGCGAGCTGGTCTGTCACAAAGTGGCATCTTCGGAGGAGGATAGGAACGCTAGTCCGTGCATGGCCTGCGAAAAACCGTGCCTGTTCGCACGGCCGGAGGGTTGCACGCATCTATGCCCGAAACCATGCCATCCCGCGCCGTGCAGCCCTTGCAAGCAACTGGTTAAGATTCCCTGCCACTGTGGCATAGGTACCTTGTACCGCAGGTGCTCCGAATTGACGTCGGCCAAACCCGAGCAACGAATCGAGTTGCTCAAGTGTGGGAACCAGTGCCCCAAAAATTATCCTTGCGGACATCGATGCATGAACGACTGCCATCCGGATGCGTGCAAGAACGAGAAGGAATGCAACAAAAAGGTGAAGCTGTTTTGCGCGTGCAAACGGATCAAGAAGGATTTTGTCTGCTCGCTGGTGCAGAAGGAAGAGATACGGATAAAATGCGACGACGTTTGCGACAAGGTGAAGAGCGAGAAACGCGAGGCGGAGGCCGCGATGTTGGAACAAAAACGGCAAGCGGAGCAGATACGGAATCAGCAAGAAATCGAGAAGTTCGAACGGAAGTTCAAGCCCCGCCGAAAGGGCAAGGATAAATTCGACAAAAGACAGTCGCAGAAAGAAACTGGAAGCGCGTATAGGAAATACTGGATTTTAGCCATTTTAATATGCCTGATAGGCGTGGCAATATTTTACGCGAGCGTGCAAAAATCGTGA
- Protein Sequence
- MQKFRRAQAENKLAINKHLEANAYLESSSEDEDEGNEEDLQNVVGKVLSAYQGKEADAEKILSYLINIFQSGSAVCLICISTVKKADPIWNCSKCFAFLHLSCILHWIQDSLNVRREKGVTPIWACPKCRMEYGQDQVPRKYKCFCRKVIDPPYQPWNIPHSCGETCGKALQPECGHKCVLLCHPGPCPPCAKTVSMKCYCGKQMPQMRRCNAKEWSCGTACNKRYELCPHACREVCHSGECPPCSEVLLLECHCKSSRELKRCSEGSWICDKACGKPLSCNVHTCQSTCHLAGDCGPCPSEKNRTCPCGKKRYAVSCRQEQLPTCGDTCGKLLDCGSHYCNMRCHTDRCGQCLEVVSKSCRCGSYRKEIACGKEFHCNKKCMQMRLCGRHLCNKKCCDCLVKNTYNVCEKTCDNALNCRKHKCSAPCHSGPCYPCARTDVIQCRCGYNKITVPCGTVKKIKPPPCNKPCKIPPICHHPKRETHKCHQGPCPPCKKICELVYKRCGHSCVAVCHAKVYVKVNKSEAKAQPAGPWDVQKDIVQLKTLPCPPCEVSVPVTCLGGHETRPWPCHNSRPTSCGRLCGRTLPCTNHTCELVCHKVASSEEDRNASPCMACEKPCLFARPEGCTHLCPKPCHPAPCSPCKQLVKIPCHCGIGTLYRRCSELTSAKPEQRIELLKCGNQCPKNYPCGHRCMNDCHPDACKNEKECNKKVKLFCACKRIKKDFVCSLVQKEEIRIKCDDVCDKVKSEKREAEAAMLEQKRQAEQIRNQQEIEKFERKFKPRRKGKDKFDKRQSQKETGSAYRKYWILAILICLIGVAIFYASVQKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00217442;
- 90% Identity
- -
- 80% Identity
- -