Emex005652.1
Basic Information
- Insect
- Eufriesea mexicana
- Gene Symbol
- nfxl1
- Assembly
- GCA_001483705.1
- Location
- NW:59419-62131[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1.1 5.2e+03 -3.2 1.1 15 19 125 129 124 129 0.81 2 21 0.34 1.7e+03 -1.6 0.2 4 10 160 166 160 166 0.93 3 21 5.5e-08 0.00027 20.0 15.1 1 18 174 190 174 191 0.98 4 21 9.2e-09 4.6e-05 22.5 12.6 4 19 230 245 228 245 0.95 5 21 0.5 2.5e+03 -2.2 1.0 5 10 269 274 269 274 0.92 6 21 2.2e-06 0.011 15.0 11.7 1 19 280 299 280 299 0.95 7 21 0.00018 0.91 8.8 8.0 1 18 335 352 335 353 0.96 8 21 0.0068 34 3.8 7.6 1 12 387 398 387 398 0.94 9 21 1.8 9.1e+03 -4.0 1.3 6 10 408 412 408 412 0.96 10 21 4.3e-07 0.0021 17.2 12.8 1 19 418 436 418 436 0.91 11 21 2 9.9e+03 -4.3 1.1 6 10 465 469 465 469 0.88 12 21 0.0001 0.51 9.6 9.8 9 19 484 494 482 494 0.90 13 21 0.00089 4.4 6.6 7.7 1 12 504 514 504 514 0.95 14 21 0.85 4.2e+03 -2.9 5.8 14 18 546 550 546 551 0.89 15 21 0.11 5.4e+02 -0.1 1.0 5 11 564 570 561 571 0.87 16 21 0.0025 12 5.2 9.2 1 12 587 598 577 608 0.79 17 21 0.3 1.5e+03 -1.5 0.4 6 10 607 611 606 611 0.88 18 21 0.0006 2.9 7.2 13.7 4 19 621 636 619 636 0.91 19 21 1.6 7.7e+03 -3.8 1.4 9 13 642 646 640 646 0.75 20 21 5.3e-05 0.26 10.5 12.8 1 16 681 695 681 701 0.86 21 21 0.72 3.6e+03 -2.7 0.4 5 10 730 735 730 735 0.92
Sequence Information
- Coding Sequence
- atgcaGAAATTTAGACAAgctcaagcagaaaataaaatagcaattaAGAAACATTTAGAAACAAATGCCTACTTAGAGTCATCCAGTGAGGATGAAGATGATAGAAATGAGGAGGATACACAGAATGTGGTTCAAAAAGTACTATTTACCTATCAAGGAAAAGAAGCAGATGtagaaaaaattttatatttaattaatatttttcaatctaGTAGTGCTGTTTGCTTAATATGTATTTCGACTGTTAAAAAAGCAGATCCaATTTGGAACTGCAAAAAATGTTTTGCTTTTCTGCATCTATCTTGCATTTTACATTGGATACGAGATAGTTTGAATGTTAAACTTGAAAAAGGTATAACACCAATATGGGCATGTCCAAAATGCCGTATGGAATATGGGCAAGATGAAGTTCCTAGTTATTATACATGCTTTTGCAAAAAATTCATAGATCCTCCATATTGTCCATGGCATATTCCACACTCCTGTGGAGACATATGTGGCTCATTCCTACAACCAAACTGTGGTCACAAATGTGTTTTACTTTGTCATCCTGGACCATGTCCCCCTTGTGCAAAAACAGTATGTGTCACATGCTATTGTGGTAAGCAAATACCTCAACAACGGCGATGTAATGCCAAAGAATGGAGTTGTGGTACtgtatgtaataaaaaatataaattgtgtTTTCATACTTGTAAAGAAGTATGTCATTCTGGAGAATGTCCTCCTTGTTCAGAGGTATTACTATTAGAATGTCATTGTAAAAGTAATAAAGAACTAAAGCAATGCTCTGAAGGACCATGGACTTGTGATAAGCCTTGTAATAGATTTCTCTCTTGTAACATTCACATATGTCAAAAAAAGTGCCATTTAGATGGCGATTGTGGACCTTGTCCATTGGAAAAAAATAGAACATGTCCATGCGGGAAAAAACGTTATGCCATTTCATGCAAACAAGAACATTTGCCTACATGTGGAGATACAtgtggaaaattattaaattgtggTTCACATTACTGTAACATGAGATGTCATATAGATCGATGTGGACAGTGTTTAGAGGTAGTCACAAAATTGTGTAGATGTGGTAGCTACCAAAAAGAAATTGCATGTGGTAAGGAATTCCATTGCAATAAGAAATGCGTGCAAATGCGTTTATGCGGAAGACATCTATGTAATAAGAAATGCTGTGATTGTCTACGTAAAAATACATATAACATATGTGAAAAAATTTGCGATAATACTTTAAATTGTCGAAAACATAAATGTGTTGCTCCTTGTCATAGTGGTCCTTGTTATCCATGCACACGAAGTGATGTTGTTCAATGTAAATGTGGATATAATAAGATAACAGTTCCATGTGGTACAGTAAAAAGAATCAGACCTCCAATTTGCAATAAGCCATGTAAAATACCACCAATCTGTCATCATCCCAAAAGAGAAACTCACAAATGTCATCAAGGCCCTTGTCCACCTTGCAAAAAGACTTGTGGCTTGCTATATAAACGATGCGGTCATTCTTGCACCTCTGTATGCCACACAAAAGTTTGGGTGaaggtaaataaaaatgatataaagaCACAACCAGCAGGACCATGGAACATACAAAAAGAAACTATGCAACTAAAAACATTACCATGTCCTCCATGTGAAGTCTCTGTACCAGTTACATGTTTAGGAGGACATGAAACATGTCCATGGCCTTGTCATATGGCCAAATCTACTTCTTGTGGAAGAGTATGTGGAAAAACATTATCATGTGAGAATCATACATGTGAATTAATTTGTCACAAAATATCATCTTCTGAATGTATGGAGTGTGAAAAACCATGCCTATTTCCACGACCACAAGGTTGCACACATTTATGCCCGAAAATTTGTCATCCTGCACCATGTGACCCTTGCAAGCAACTAGTTAAAGTACTATGCCATTGTGGTATAAGTACTTTATATTACAGATGTTCTGAACTAACATCAACCAAAACTGAACAACgtaatgaattatttaaatgtGGTAACCAGTGTccaaaaaatTACCCTTGTGGACATCAATGCATTGATGATTGTCACCCAGGTCcatgtaaaaatgaaaaagaatgcAAGAAGAAAGTGAAGCTGTTTTGCGATTGTAAACGTATAAAGAAAGATTTTATTTGTTCAATAGTGCAGAGGGAAGATATTCATATAAAATGCGACGATGTTTGTAACACAATAAAGAACGAAAAACGTCAAGCTGAAACAGCTTTATTAGAACGAAAacggaaagaagaagaaatacgTAATCAAAAGGAAATTGAAAAGTTTGAACGAAAATTCAAACCCCGTCGTAAAGGAAAAGATAAGTTCGATaaaaaacaattattaaataaaacgcataataattatagaaaatattggagtttagctattttaatatgtttaataagtattgtaatattttatgtgAGTGTCCAATATTCTTggataaaattgatttattaa
- Protein Sequence
- MQKFRQAQAENKIAIKKHLETNAYLESSSEDEDDRNEEDTQNVVQKVLFTYQGKEADVEKILYLINIFQSSSAVCLICISTVKKADPIWNCKKCFAFLHLSCILHWIRDSLNVKLEKGITPIWACPKCRMEYGQDEVPSYYTCFCKKFIDPPYCPWHIPHSCGDICGSFLQPNCGHKCVLLCHPGPCPPCAKTVCVTCYCGKQIPQQRRCNAKEWSCGTVCNKKYKLCFHTCKEVCHSGECPPCSEVLLLECHCKSNKELKQCSEGPWTCDKPCNRFLSCNIHICQKKCHLDGDCGPCPLEKNRTCPCGKKRYAISCKQEHLPTCGDTCGKLLNCGSHYCNMRCHIDRCGQCLEVVTKLCRCGSYQKEIACGKEFHCNKKCVQMRLCGRHLCNKKCCDCLRKNTYNICEKICDNTLNCRKHKCVAPCHSGPCYPCTRSDVVQCKCGYNKITVPCGTVKRIRPPICNKPCKIPPICHHPKRETHKCHQGPCPPCKKTCGLLYKRCGHSCTSVCHTKVWVKVNKNDIKTQPAGPWNIQKETMQLKTLPCPPCEVSVPVTCLGGHETCPWPCHMAKSTSCGRVCGKTLSCENHTCELICHKISSSECMECEKPCLFPRPQGCTHLCPKICHPAPCDPCKQLVKVLCHCGISTLYYRCSELTSTKTEQRNELFKCGNQCPKNYPCGHQCIDDCHPGPCKNEKECKKKVKLFCDCKRIKKDFICSIVQREDIHIKCDDVCNTIKNEKRQAETALLERKRKEEEIRNQKEIEKFERKFKPRRKGKDKFDKKQLLNKTHNNYRKYWSLAILICLISIVIFYVSVQYSWIKLIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00217442;
- 90% Identity
- -
- 80% Identity
- -