Nfuc007884.1
Basic Information
- Insect
- Nomada fucata
- Gene Symbol
- nfxl1
- Assembly
- GCA_948146005.1
- Location
- OX411280.1:29153077-29155947[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1.1 7.5e+03 -3.2 1.1 15 19 126 130 125 130 0.81 2 17 0.14 9.9e+02 -0.4 3.6 4 12 161 169 160 169 0.92 3 17 9e-08 0.00063 19.4 14.5 1 18 175 191 175 192 0.98 4 17 3.4e-07 0.0024 17.5 12.5 4 19 231 246 229 246 0.93 5 17 3.8e-07 0.0026 17.4 12.0 1 18 281 299 281 300 0.92 6 17 2.8e-05 0.2 11.4 8.7 1 18 336 353 336 354 0.97 7 17 0.0029 21 4.9 7.4 1 12 388 399 388 399 0.94 8 17 0.81 5.7e+03 -2.9 0.8 6 10 409 413 408 413 0.91 9 17 7.9e-08 0.00056 19.5 12.5 1 18 419 436 419 437 0.92 10 17 0.0016 11 5.8 10.2 9 19 485 495 483 495 0.90 11 17 0.0025 18 5.2 6.2 1 12 505 515 505 515 0.95 12 17 0.85 6e+03 -2.9 5.8 14 18 547 551 547 552 0.89 13 17 0.0001 0.7 9.6 6.2 1 12 588 599 588 599 0.95 14 17 0.78 5.5e+03 -2.8 1.7 6 10 615 619 614 619 0.88 15 17 0.02 1.4e+02 2.3 13.8 3 19 628 644 627 644 0.90 16 17 1.7e-05 0.12 12.1 11.4 1 16 689 703 689 709 0.88 17 17 0.72 5.1e+03 -2.7 0.4 5 10 738 743 738 743 0.92
Sequence Information
- Coding Sequence
- ATGCAGAAGTTTAAACGTGCTCAAGCAGAAAATAGAATATCAATTAACAGGCATTTAGAAGCAAACTCCTACTTAGAATCGTCTAGCGACGATGAAGATGATACAAATGAAGACGATATACAAAATGTAGTTGGAAAAGTCCTCTCTGCCTACCAAGGAGAGGAAGCGGACGGAGAGAAAATTCTATCATATTTAGTTAACATATTTCAATCTGGCAGCGCTGTTTGCTTAATATGTATTTCAACTGTGAAGAAAGCAGATGCAATTTGGAACTGCAGCACATGTTTCACATTTTTACACTTATCTTGCATATTGCATTGGATACGAGATAGCATAAATGTTAAGCGTGAAAAAGGAGTAACACCAATATGGGCATGCCCAAAATGCCGTATGGAATATGGGCAAGATGAAGTTCCTGGTAACTATAAATGTTTCTGTAAAAAAGTCATAGATCCTCCATATCAGCCGTGGAATATTCCACATTCCTGTGGGGAAACATGTTGCAAACCATTGCAACCAGATTGTGGCCACAATTGTGTCTTACTTTGTCATCCAGGGCCATGTCCACCTTGCGCAAAGACAGTATCTGTTCAATGTTATTGTGGTAAGCAAGCGCCACAACAACGACGATGTAATGCCAAAGAATGGAGTTGTGGCACTGTGTGCAATAAAGAATATAAATCATGCTTGCACATCTGCAAAGAAGTGTGTCACACAGGAGAATGCCCTCCTTGTTCGGAAATATTGTTTCTTGAATGTCACTGTAAGACGAACAAAGGGCTAAAGCAGTGCTCTGAAGGCTCGTGGATCTGTAATAAACTTTGCAACAGAACTCTCTCCTGCAATGTTCATACATGCCAAAGTACGTGCCATTTGCCTGGCGATTGTGGACCTTGTCTATTAGAAAAGAACAGGACATGCCCATGTGGAAAGAAACGGTATACCGGTTCATGCAAACAGGGACAATTACCTACATGTGGAGATACCTGTGGAAAGCTATTGGATTGCGGTTTGCATTACTGTAGCATGAGGTGTCACACAGATCAATGCGGACAATGTTTAGAGGTAGTTGTAGAATCATGTCGATGTGGTAGCTACAAGAAAGAAATTGCATGCGGCAAAGAATTTCACTGCAACAAGAAATGTACGCAAATGCGTCTGTGCGGACGACATATGTGCAACAAAAAATGTTGCGACTGTCTGATTAAAAATACGTACAATGCATGCGAAAAAATATGCAATAATACTTTAAATTGTCGCAAGCACAAATGTTCTGCTCCTTGCCACAGCGGGCCTTGTTATCCCTGTGCCCAGACTAACGTTATTCAGTGTAGATGTGGATACAATAAGATAACGGTACCATGCGGTACAGTAAAAAGAATTAAACCTCCGCCTTGCAAAAAGTCATGCAAGGTGCCACCAATTTGTCATCATCCTAAGAGAGAAACTCATAAGTGTCATCAAGGTCACTGTCCGCCTTGTAGAAAAATCTGTGCCTTAGTGTACAAGCAATGCGGTCACTCTTGTGTTGCTGTTTGCCATACAAAAGTTTGGGTAAATGTAAATAAACATGATGCAAAAGCTCAGCTGGCAGGACCGTGGGAGATACAGAAAGAGGTCATGCAACTGAAAACATTACCCTGTCCACCGTGTGAAGTTTCTGTAGCAGTCACGTGCTTGGGAGGACACGAGACACGTCCGTGGCCTTGCCACATCGCCAGGCCTACCTCTTGCGGACGATTATGCAGACAGATGTTACTCTGTACTAATCATACATGTGAATTAGTTTGTCATAAGTTACCGTCATTTGAAGGGGACAAAAATGGTACTCCCTGTCTGGAGTGTGAGAAGCCATGCCTGTTTCAAAGGCCACAAGGCTGCACACATATGTGCCCGAAACCCTGTCATCCGGCGCCGTGTAGTCTTTGCAAACAATTAGTTAAAATTTCATGCCATTGTGGAATAGGTACATTATACCGCAGATGCTTTGAATTAACATCCGCTACAGCTGAAAAACGCAATGAATTGCTGAAATGTGGGAACCAGTGTCCCAAAAATTATCCGTGTGGACATCGGTGTATGAATAATTGTCATCAAGGCCCATGCAAGAATGAAAAGGAATGCAATAAAAAGGTGAAACTATTTTGCAAATGTAAACGTATTAAGAGAGATTTTGTTTGCTCGGTGCTGCAGAAAGCGGAAATTCACATAAAATGTGATGACGTATGTGATAAATTAAAGAGCGAGAAACATCAAGCTGAAGCTGCATTACTAGAGCAGAAGCGGCAAGAGGAAGAAATGCGCAATCAACAAGAAATAGAAAAGTTTCAACGAAAATTTAAACCCCGTCGTAAAGGAAAGGATAAGTTCGATAAAATGAAATTGCAGGACAAGACTTGCAATAATTATAGAATATACTGGATTTTAGCTATTTTAATATGTTTAGTAGGTATTAGTATATTTTATGCAAGCGTACCAAAATTTTAA
- Protein Sequence
- MQKFKRAQAENRISINRHLEANSYLESSSDDEDDTNEDDIQNVVGKVLSAYQGEEADGEKILSYLVNIFQSGSAVCLICISTVKKADAIWNCSTCFTFLHLSCILHWIRDSINVKREKGVTPIWACPKCRMEYGQDEVPGNYKCFCKKVIDPPYQPWNIPHSCGETCCKPLQPDCGHNCVLLCHPGPCPPCAKTVSVQCYCGKQAPQQRRCNAKEWSCGTVCNKEYKSCLHICKEVCHTGECPPCSEILFLECHCKTNKGLKQCSEGSWICNKLCNRTLSCNVHTCQSTCHLPGDCGPCLLEKNRTCPCGKKRYTGSCKQGQLPTCGDTCGKLLDCGLHYCSMRCHTDQCGQCLEVVVESCRCGSYKKEIACGKEFHCNKKCTQMRLCGRHMCNKKCCDCLIKNTYNACEKICNNTLNCRKHKCSAPCHSGPCYPCAQTNVIQCRCGYNKITVPCGTVKRIKPPPCKKSCKVPPICHHPKRETHKCHQGHCPPCRKICALVYKQCGHSCVAVCHTKVWVNVNKHDAKAQLAGPWEIQKEVMQLKTLPCPPCEVSVAVTCLGGHETRPWPCHIARPTSCGRLCRQMLLCTNHTCELVCHKLPSFEGDKNGTPCLECEKPCLFQRPQGCTHMCPKPCHPAPCSLCKQLVKISCHCGIGTLYRRCFELTSATAEKRNELLKCGNQCPKNYPCGHRCMNNCHQGPCKNEKECNKKVKLFCKCKRIKRDFVCSVLQKAEIHIKCDDVCDKLKSEKHQAEAALLEQKRQEEEMRNQQEIEKFQRKFKPRRKGKDKFDKMKLQDKTCNNYRIYWILAILICLVGISIFYASVPKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00217442;
- 90% Identity
- iTF_01066633;
- 80% Identity
- -