Basic Information

Insect: Apis mellifera
Gene Symbol: nfxl1
Assembly: GCA_003254395.2
Location: NC:15425944-15429717[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.1 5e+03 -3.2 1.1 15 19 126 130 125 130 0.81

2 18 0.14 6.8e+02 -0.5 0.8 4 10 161 167 160 167 0.95

3 18 5.6e-08 0.00026 20.0 15.1 1 18 175 191 175 192 0.98

4 18 1.1e-08 5.1e-05 22.3 14.0 1 19 229 246 229 246 0.94

5 18 0.027 1.3e+02 1.9 8.9 1 18 281 299 275 300 0.88

6 18 4.1e-05 0.19 10.9 9.2 1 18 336 353 336 354 0.97

7 18 0.0068 32 3.8 7.6 1 12 388 399 388 399 0.94

8 18 1.9 8.7e+03 -4.0 1.3 6 10 409 413 409 413 0.96

9 18 7.7e-08 0.00036 19.6 12.0 1 18 419 436 419 437 0.92

10 18 0.0001 0.49 9.6 9.8 9 19 485 495 483 495 0.90

11 18 0.016 76 2.6 4.8 1 12 505 515 505 515 0.95

12 18 0.85 4e+03 -2.9 5.8 14 18 547 551 547 552 0.89

13 18 0.00097 4.6 6.5 7.5 1 12 588 599 578 599 0.82

14 18 2 9.4e+03 -4.4 3.8 6 10 615 619 611 619 0.71

15 18 0.005 24 4.2 16.4 4 19 629 644 627 644 0.91

16 18 2 9.4e+03 -6.1 2.9 9 13 650 654 650 654 0.74

17 18 1.1e-05 0.05 12.8 11.7 1 16 689 703 689 709 0.90

18 18 0.72 3.4e+03 -2.7 0.4 5 10 738 743 738 743 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.1	5e+03	-3.2	1.1	15	19	126	130	125	130	0.81
2	18	0.14	6.8e+02	-0.5	0.8	4	10	161	167	160	167	0.95
3	18	5.6e-08	0.00026	20.0	15.1	1	18	175	191	175	192	0.98
4	18	1.1e-08	5.1e-05	22.3	14.0	1	19	229	246	229	246	0.94
5	18	0.027	1.3e+02	1.9	8.9	1	18	281	299	275	300	0.88
6	18	4.1e-05	0.19	10.9	9.2	1	18	336	353	336	354	0.97
7	18	0.0068	32	3.8	7.6	1	12	388	399	388	399	0.94
8	18	1.9	8.7e+03	-4.0	1.3	6	10	409	413	409	413	0.96
9	18	7.7e-08	0.00036	19.6	12.0	1	18	419	436	419	437	0.92
10	18	0.0001	0.49	9.6	9.8	9	19	485	495	483	495	0.90
11	18	0.016	76	2.6	4.8	1	12	505	515	505	515	0.95
12	18	0.85	4e+03	-2.9	5.8	14	18	547	551	547	552	0.89
13	18	0.00097	4.6	6.5	7.5	1	12	588	599	578	599	0.82
14	18	2	9.4e+03	-4.4	3.8	6	10	615	619	611	619	0.71
15	18	0.005	24	4.2	16.4	4	19	629	644	627	644	0.91
16	18	2	9.4e+03	-6.1	2.9	9	13	650	654	650	654	0.74
17	18	1.1e-05	0.05	12.8	11.7	1	16	689	703	689	709	0.90
18	18	0.72	3.4e+03	-2.7	0.4	5	10	738	743	738	743	0.92

Sequence Information

Coding Sequence: atgcaaaaatttagaCGAGCTCAagcagaaaataaaatagcaatTAACAAACATTTAGAAGCAAATGCCTACTTAGAATCATCTAGTGAGGatgaaaatgatagaaatgaaGAAGATATGCAAAATGTAGTTGAAAAAGTTTTAGCTTCTTATCAAGGAAAAGAAGCAGATGCAGAAAAAatgttatcatatttaattaatgttttccAATCTGGTAATGCTGTTTGCTTAATATGTATTTCAACCGTAAAAAAAGCAGACCCGatTTGGAATTGTAACAAATGTTTTGCTTTTTTACATCTGTCTTGCATTTTGCATTGGATACAGGATAGTTTAAATGTTAAACGTGAGAAAGGCATTACATTGATATGGGCATGtcCAAAGTGTCGTATGGAATATAAGCAAGATGATGTACCTCGTAATTATAAATGCTTTTGTGGGAAATCTATTGATCCACCATATCATCCATGGAATATTCCACATTCATGTGGAGAAACTTGTGGTAAATCCTTAAAACCAGAATGTGGTCACAAATGTGTTTTACTTTGTCATCCTGGACCATGTCCTCCATGTGCAAAAACAGTATCTATCAAATGCTATTGTGGTAAACAAATACCTCAACAACGACGATGTAATGCTAAAGAATGGAGCTGTGGCActatatgcaataaaaaatataaattatgttcaCATACTTGCAAGGAAATATGCCATTCAGGAGAATGCCCTCCTTGTTCAgaagtattattattggaatgtCACTGTAAGATTAACAAAGAATTAAAACAATGTTATGAAAGTTCATGGATTTGTGATAAACCTTGTGGCAGACTTCTTTCTTGTAATGTTCATACATGCTTAGGTAAATGTCATTTAGTTAATGATTGTGGATCTTGTTTATTGGAGCAAAATAGAACATGTCCATGTGGAAAAAAACGTTATGCCATTTCATGTAAACAAGAACAATTACCTACATGTGGAGATACAtgtggaaaattattgaattgtgGTTCACACTACTGTAATATGAGATGTCATACAGATCGATGTGGACAATGTTTAGAGGTAGTCACAAAATCATGTAGATGTGGcaattatcaaaaagaaattgcatGTGGTAAAGAGTTTCATTGCAATAAGAAATGCATGCAAATGCGTTTGTGCGGTAGACATTTATGTAACAAAAAATGTTGCGATTGcttgattaaaaatacatataatatttgtgaaaaaatatgtGACAATACTTTAAACTGTCGCAAACATAAATGTGCCGCTCCTTGTCATAGCGGTCCTTGTTATCCGTGTGCACGAACTGATATTATTCAGTGTAAATGcggatacaataaaataatagtaccATGTGgtacagtaaaaaaaatcaaacctCCAGTTTGCAATAAATCATGTAAAATACCGCCAATTTGCCATCATCCAAAACGAGAAACTCATAAATGTCATCAAGGTCCTTGTCCACCttgcaaaaaaatttgcaatttagtATATAAACGATGTGGTCATCTTTGTGTTGCTATTTGTCATACAAAAGTATgggtaaaagtatataaaaatgatacaaagACACAACCAATTGGACCTTGGGACATACAAAAAGAAACTATGCAGCTAAAAACATTACCTTGTCCACCATGTGAAGTTTCAGTACCAATTACATGTTTAGGAGAACACGAGACACGTCCGTGGCCTTGTCATATGGCTAAGTCTACTTCTTGCGGAAGATtatgtggaaaaatattattatgtatgaaTCATACATGTGAATTAATTTgtcataaaatatcattttctaaaGAAGATATAAGTGGTACTCCATGCATGGAATGTGAAAAACCGTGTCTATTTCCACGACCACAAGGGTGCACGCATTTATGCCCAAAACCTTGTCATCCTGCACCATGTAGTCCCTGCAAGcaattagttaaaattttatgtcatTGTGGTATAAGTACTTTATACCGCAGATGTTCAGAACTTACATCAGCTAAAGCAGAACAACGTAATGAATTGCTTAAATGTGGAAATCAATGtccaaaaaattATTCTTGTGGACATCGATGTATAAATGATTGTCATCCAGGTCcatgtaaaaatgaaaaaaaatgtaataagaaagtgaaattattttgtgaaTGCAAACGTattaagaaagattttatttgcTCATTGATacaaaaagatgaaatttgcataaaatgtGACGATGTttgtaacaaattaaaaatagaaaaacgtCAAGCTGAGGCTGCTTTATTAGAACAAAAACGACAAGCAGAAGAAATACGTAATCAACAAGAAATCGAAAAGtttgaacgaaaatttaaacCTCGTCGTAAAGGAAAggataaattcgataaaagacaattattgaatgaaaattgtaataattatagaaaatattggattttagccattttaatatgttttataagtattgcaatattttatgcaagcattcaaaaattttga
Protein Sequence: MQKFRRAQAENKIAINKHLEANAYLESSSEDENDRNEEDMQNVVEKVLASYQGKEADAEKMLSYLINVFQSGNAVCLICISTVKKADPIWNCNKCFAFLHLSCILHWIQDSLNVKREKGITLIWACPKCRMEYKQDDVPRNYKCFCGKSIDPPYHPWNIPHSCGETCGKSLKPECGHKCVLLCHPGPCPPCAKTVSIKCYCGKQIPQQRRCNAKEWSCGTICNKKYKLCSHTCKEICHSGECPPCSEVLLLECHCKINKELKQCYESSWICDKPCGRLLSCNVHTCLGKCHLVNDCGSCLLEQNRTCPCGKKRYAISCKQEQLPTCGDTCGKLLNCGSHYCNMRCHTDRCGQCLEVVTKSCRCGNYQKEIACGKEFHCNKKCMQMRLCGRHLCNKKCCDCLIKNTYNICEKICDNTLNCRKHKCAAPCHSGPCYPCARTDIIQCKCGYNKIIVPCGTVKKIKPPVCNKSCKIPPICHHPKRETHKCHQGPCPPCKKICNLVYKRCGHLCVAICHTKVWVKVYKNDTKTQPIGPWDIQKETMQLKTLPCPPCEVSVPITCLGEHETRPWPCHMAKSTSCGRLCGKILLCMNHTCELICHKISFSKEDISGTPCMECEKPCLFPRPQGCTHLCPKPCHPAPCSPCKQLVKILCHCGISTLYRRCSELTSAKAEQRNELLKCGNQCPKNYSCGHRCINDCHPGPCKNEKKCNKKVKLFCECKRIKKDFICSLIQKDEICIKCDDVCNKLKIEKRQAEAALLEQKRQAEEIRNQQEIEKFERKFKPRRKGKDKFDKRQLLNENCNNYRKYWILAILICFISIAIFYASIQKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00217442;
90% Identity: iTF_00141524;
80% Identity: -