Dnoa007956.1
Basic Information
- Insect
- Dufourea novaeangliae
- Gene Symbol
- nfxl1
- Assembly
- GCA_001272555.1
- Location
- NW:703092-706660[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.77 3.7e+03 -2.8 1.1 15 19 126 130 125 130 0.82 2 18 0.37 1.8e+03 -1.8 0.5 4 10 161 167 161 167 0.93 3 18 5.6e-08 0.00027 20.0 15.1 1 18 175 191 175 192 0.98 4 18 4e-09 1.9e-05 23.7 14.9 1 19 229 246 229 246 0.95 5 18 0.72 3.5e+03 -2.7 1.0 5 10 270 275 270 275 0.88 6 18 1.7e-05 0.08 12.1 12.6 1 19 281 300 281 300 0.92 7 18 0.00022 1.1 8.5 8.7 1 18 336 353 336 354 0.97 8 18 0.0069 33 3.8 7.6 1 12 388 399 388 399 0.94 9 18 1.2 5.8e+03 -3.4 1.7 6 10 409 413 409 413 0.97 10 18 2.1e-07 0.001 18.2 12.6 1 18 419 436 419 437 0.92 11 18 1.7 8e+03 -3.9 1.3 6 10 466 470 465 470 0.76 12 18 0.0001 0.5 9.6 9.8 9 19 485 495 483 495 0.90 13 18 0.00047 2.2 7.5 4.9 1 12 505 515 505 515 0.95 14 18 0.86 4.1e+03 -2.9 5.8 14 18 547 551 547 552 0.89 15 18 0.0017 8.2 5.7 8.5 1 12 588 599 578 599 0.91 16 18 2 9.6e+03 -4.4 3.8 6 10 614 618 610 618 0.71 17 18 0.0013 6.1 6.1 17.3 3 19 627 643 626 643 0.92 18 18 8.5e-05 0.41 9.9 9.6 1 16 688 702 688 708 0.88
Sequence Information
- Coding Sequence
- ATGCAGAAATTTAGAAGAGCTCAAGCACAAAATAAAGTAGCAATTAATAAGCATTTAGAAGCAAATGCTCATTTAGAATCATCCAGTGAGGATGAAGATGACATAGGTGCAGAGGATATACAAAATGTGGTTAGCAAAGTACTATCTGCCTACCATGGAAGAGAGGCAGATGCAGAAAAGATTTTATCAtacttaattaatatatttcaatccGGTAGCGCGGTttgtttaatatgtatttcaacAATAAGAAAAGCAGATCCGATCTGGAACTGCAGTAAGTGTTTtgcttttttacatttatccTGCATACTACAATGGATACGTGATAGTTTAAATGTTAAACGTGAAAAAGGTATTGCTCCAGTATGGGCATGTCCAAATTGTCGTACGGAGTATAGGCAAGATGAAATTCCTCGTAACTATACATGCTTCTGCAAAAAAGTTGTGGACCCTGCATTTCATCCATGGAATATTCCACACTCTTGTGGAGATACTTGTGACAAACTTTTGCAACCAGAGTGTGGCCACAAATGTGTTTTACTCTGTCATCCTGGGCCATGTCCTCCGTGTGCTAAGACAGTGTCGGTTAAATGTTTTTGTGGCAAACAAGCACCTCAACAACGAAGATGCAATGCCAAAGAATGGAGTTGCGGTACTgcatgtaacaaaaaatacaaatcatGCTCTCATACTTGCAAGGAATTATGTCATGATGGTGACTGCCCTCCGTGTCCAGAAATGTTGCTACTTGAATGCCACTGTAAGAGTTACAAGGGTGTAACGCAATGTTCGGAAGGTGCATTAAAGTGCGATAAACCTTGTCGCCGACCTCTATCTTGTAACGTTCACTTTTGTCAGAGCACATGCCATTTACCTGGAGAATGTGGTCCTTGTCCTCTGGAAAAGAACAGAACATGTCCCTGTGGGAAAAAGCGTTACGCGATTTCTTGCAAACAGGAACAACTACCCACATGCGGCGACACGTGTGGCAAACTACTAGATTGTGGTTCACATTTTTGCAGCATGAGATGTCACACGAATCGATGTGGACAATGCTTGGAAGTGGTCAAAAAGTCATGTCGTTGCGgaagttataaaaaagaaattgccTGCGGCAAAGAATTTCACTGCACTAAAAAATGTACGCAAATGCGACTATGCGGAAGGCATTTGTGCAACAAGAAATGTTGCGATTGTTTGACCAAGAATACGTTTAACTTATGCGAAAAAGTTTGCGAGAACACTTTAAACTGTCGCAAGCACAAATGTTCGGCTCCATGTCACAACGGCCCTTGTTATCCGTGTGTGCTTACCGACGTTATTCAATGCAGATGTGGTTACAATAAGATAACAGTACCATGCGGTACAACAAAGAGAATTAAACCACCGCCTTGTAACAAGCCGTGTAAGATACCGCCGATTTGTCACCACCCTAAAAGAGAAACTCATAAATGTCATCAAGGTCCGTGTCCaccttgtaaaaaaatttgcgATTTAGTATATAAACGATGCGGTCATTCGTGCATTGCCATTTGCCACACGAAAGTCTGGGTAAAAGTAAACAAGAATGATCTGAATGCACATGCTACGGGGCCATGGGaaatacagaaagaaaccaaGCAATTGAAAACGCTACCGTGTCCACCATGCGAAGTATCAGTACCAGTTACATGTTTAGGAGGCCATGAGACGCGTCCATGGCCTTGTCATATGGCCAAACCCACATCTTGTGGAAGGCTCTGTGGAAGAACGTTATCCTGTACGAACCATAATTGTGAATTCGTTTGCCACAAAGTACAATCCGACAATGGTAAAAATAGTACCCCATGCATGGAATGTGAGAAACCATGTTTATTCCCGCGACCACAAGGTTGTACGCATTCGTGTCCAAAGCCATGTCACCCAGCACCGTGTAGTCCTTGTAAACAACTAGTTAAAATTTCATGTCATTGCGGTATAGTCACTTTGTACCGAAGATGCGTCGAATTAACATCGGCTACAGTGGAGCAACGTAATCAATTGCTCAAATGTGGGAACCAGTGTcctaaaaatTATCCTTGTGGACACCGATGTATGAATGACTGCCATCCCGGTGTATGTAAGAACGATAATGAgtgcaataaaaatgttaaggTACTCTGTCCGTGCAAACGGATCAAGAAGAACTTTGTGTGTTCTATAATACAAAAGCAACAAATACACGTGCAATGCGATGATATTtgtaagaaattgaaaaatgagaaatgCGAAGCGGAAGCGGCTTTGCTGGAGCAGAAACGACAAGCCGAAGAAATACGTAATCAAGAAGAGATTGAGAAATTTGAACGAAAATTCAAACCACGTCGCAAAGGAAAAGATAAGTCTGACAGGAAACAGTTACAAACAGGAACGAATAAAAACTATTGGAAATACTGGATTTTAGCAATTTTAATGTGCATAGTAGGCATAGTAATATATTGTGTGTGTTCAGAAGATGTGCACCATTTTTAA
- Protein Sequence
- MQKFRRAQAQNKVAINKHLEANAHLESSSEDEDDIGAEDIQNVVSKVLSAYHGREADAEKILSYLINIFQSGSAVCLICISTIRKADPIWNCSKCFAFLHLSCILQWIRDSLNVKREKGIAPVWACPNCRTEYRQDEIPRNYTCFCKKVVDPAFHPWNIPHSCGDTCDKLLQPECGHKCVLLCHPGPCPPCAKTVSVKCFCGKQAPQQRRCNAKEWSCGTACNKKYKSCSHTCKELCHDGDCPPCPEMLLLECHCKSYKGVTQCSEGALKCDKPCRRPLSCNVHFCQSTCHLPGECGPCPLEKNRTCPCGKKRYAISCKQEQLPTCGDTCGKLLDCGSHFCSMRCHTNRCGQCLEVVKKSCRCGSYKKEIACGKEFHCTKKCTQMRLCGRHLCNKKCCDCLTKNTFNLCEKVCENTLNCRKHKCSAPCHNGPCYPCVLTDVIQCRCGYNKITVPCGTTKRIKPPPCNKPCKIPPICHHPKRETHKCHQGPCPPCKKICDLVYKRCGHSCIAICHTKVWVKVNKNDLNAHATGPWEIQKETKQLKTLPCPPCEVSVPVTCLGGHETRPWPCHMAKPTSCGRLCGRTLSCTNHNCEFVCHKVQSDNGKNSTPCMECEKPCLFPRPQGCTHSCPKPCHPAPCSPCKQLVKISCHCGIVTLYRRCVELTSATVEQRNQLLKCGNQCPKNYPCGHRCMNDCHPGVCKNDNECNKNVKVLCPCKRIKKNFVCSIIQKQQIHVQCDDICKKLKNEKCEAEAALLEQKRQAEEIRNQEEIEKFERKFKPRRKGKDKSDRKQLQTGTNKNYWKYWILAILMCIVGIVIYCVCSEDVHHF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00217442;
- 90% Identity
- -
- 80% Identity
- -