Basic Information

Insect: Bombus sibiricus
Gene Symbol: nfxl1
Assembly: GCA_014737505.1
Location: JACXIM010000124.1:627419-630171[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.1 1.2e+04 -3.2 1.1 15 19 126 130 125 130 0.81

2 19 0.14 1.7e+03 -0.5 0.8 4 10 161 167 160 167 0.95

3 19 5.6e-08 0.00065 20.0 15.1 1 18 175 191 175 192 0.98

4 19 3.9e-08 0.00045 20.5 15.5 1 19 229 246 229 246 0.95

5 19 0.24 2.8e+03 -1.1 0.3 5 10 270 275 270 276 0.95

6 19 3.5e-05 0.41 11.1 10.9 1 19 281 300 281 300 0.92

7 19 4.1e-05 0.48 10.9 9.2 1 18 336 353 336 354 0.97

8 19 0.0068 80 3.8 7.6 1 12 388 399 388 399 0.94

9 19 0.48 5.5e+03 -2.1 0.8 6 10 409 413 408 413 0.95

10 19 7.7e-08 0.0009 19.6 12.0 1 18 419 436 419 437 0.92

11 19 0.95 1.1e+04 -3.1 0.8 6 10 466 470 465 470 0.85

12 19 0.0021 24 5.4 10.5 9 19 485 495 483 495 0.90

13 19 0.0025 29 5.2 6.2 1 12 505 515 505 515 0.95

14 19 0.85 1e+04 -2.9 5.8 14 18 547 551 547 552 0.89

15 19 0.001 12 6.4 8.7 1 12 588 599 578 599 0.91

16 19 2 2.3e+04 -4.4 3.8 6 10 615 619 611 619 0.71

17 19 0.0011 13 6.3 15.0 4 19 629 644 627 644 0.91

18 19 0.12 1.4e+03 -0.2 0.2 3 9 659 665 653 665 0.67

19 19 9.2e-06 0.11 12.9 11.7 1 16 689 703 689 709 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.1	1.2e+04	-3.2	1.1	15	19	126	130	125	130	0.81
2	19	0.14	1.7e+03	-0.5	0.8	4	10	161	167	160	167	0.95
3	19	5.6e-08	0.00065	20.0	15.1	1	18	175	191	175	192	0.98
4	19	3.9e-08	0.00045	20.5	15.5	1	19	229	246	229	246	0.95
5	19	0.24	2.8e+03	-1.1	0.3	5	10	270	275	270	276	0.95
6	19	3.5e-05	0.41	11.1	10.9	1	19	281	300	281	300	0.92
7	19	4.1e-05	0.48	10.9	9.2	1	18	336	353	336	354	0.97
8	19	0.0068	80	3.8	7.6	1	12	388	399	388	399	0.94
9	19	0.48	5.5e+03	-2.1	0.8	6	10	409	413	408	413	0.95
10	19	7.7e-08	0.0009	19.6	12.0	1	18	419	436	419	437	0.92
11	19	0.95	1.1e+04	-3.1	0.8	6	10	466	470	465	470	0.85
12	19	0.0021	24	5.4	10.5	9	19	485	495	483	495	0.90
13	19	0.0025	29	5.2	6.2	1	12	505	515	505	515	0.95
14	19	0.85	1e+04	-2.9	5.8	14	18	547	551	547	552	0.89
15	19	0.001	12	6.4	8.7	1	12	588	599	578	599	0.91
16	19	2	2.3e+04	-4.4	3.8	6	10	615	619	611	619	0.71
17	19	0.0011	13	6.3	15.0	4	19	629	644	627	644	0.91
18	19	0.12	1.4e+03	-0.2	0.2	3	9	659	665	653	665	0.67
19	19	9.2e-06	0.11	12.9	11.7	1	16	689	703	689	709	0.88

Sequence Information

Coding Sequence: ATGCAGAAATTTAGACAAGCTCAAGCAGAAAATAAAATAGCAATTAATAAACATTTAGAAGCAAATGCTTATCTAGAATCTTCCAGTGAGGATGAAGATGATAGAAATGAAGAGGATATACAAAATATAGTTGGAAAAGTAATATCTGCCTACCAAGGCAAAGAGGCAGATGCAGAAAAAATTTTATCATATTTAATTAATATTTTTCAATCTGGCAATGCTGTTTGTTTAATATGTATTTCAACTGTGAAAAGAGCAGATCCAATTTGGAATTGTAACAAGTGTTTTGCTTTCCTACATCTGTCTTGCATTTTGCATTGGATACAGGATAGTTTGAATATTAAACGCGAGAAAGGTATCACATCAATATGGGCATGCCCAAAATGTCGTATGGAATATAATCAAGATGACATTCCTCGTAACTATAAATGCTTTTGTAAAAAAACCATAGATCCCCCATATAGTCCATGGAATATTCCACATTCCTGTGGAGAAACATGCGACAAACTGCTGCAACCAGAATGTGGTCACAAATGTGTTTTGCTTTGCCATCCTGGACCATGTCCTCCTTGTGCAAAGACGGTATCTATTAAATGCTACTGTGGCAAACAGATGCCTCAACAACGACGATGCAATGCCAAAGAATGGAGTTGTGGTACTGAATGTAACAAAGAGTATAAGTTATGTTCACACACTTGCAAAGAAATGTGTCACTCAGGGGAATGTCCTCCTTGTCCAGAAATATTATTACTAGAATGCCATTGTAAGAGTAACAAAGAATTAAAACAATGCTCTGAAGGTCTATGGACTTGTAATAAACTTTGTGGCAGACCTCTTTCTTGTAATGTTCACATATGTCAAAGCAAATGTCATTTAATGGGCGACTGCGGACCCTGTCCATTGGAGAAAAATAGAACATGTCCGTGTGGGAAAAAACGTTATGCCATTTCCTGCAAACAAGAACAGCTACCCACATGTGGAGATACATGTGGAAAATTACTAAATTGCGGTTCGCATTATTGTAATATGAGATGTCATACAGATCGTTGCGGGCAGTGTTTAGAGGTAGTCACAAAATCGTGTAGATGTGGCAGCTATCAGAAAGAAATTGCATGTGGCAAAGAATTTCATTGCAATAAAAAGTGCATGCAAATGCGGTTGTGCGGAAGACATTTGTGTAATAAGAAATGCTGCGACTGCTTGATTAAAAACACGTATAACATGTGCGAAAAAGTATGCGATAATGCTTTAAACTGCCGCAAACACAAATGTGCTGCTCCTTGTCATAGCGGTCCTTGTTATCCGTGCGCACGAACTGACGTTATTCAATGTAGATGCGGATATAATAAGATAACAGTACCATGTGGTACGGTAAAAAAGATCAAGCCACCATCTTGCAATAAACCATGTAAAATACCTCCGATTTGCCACCATCCAAAACGAGAAACCCACAAATGCCATCAAGGTCACTGTCCACCTTGCAAAAAGATTTGCGGCATGGTATATAAACGATGTGGTCATTCTTGTGTAGCTGTTTGCCACACAAAAGTGTGGCTAAAGGTGAGCAAAAATGATATAAAGACGCAACCAGCAGGACCATGGGACATACAAAAGGAAACTTATCAGCTAAAAACATTACCATGTCCACCATGTGAAGTTTCTGTACAAGTTACATGTTTAGGAGGACATGAAACGCGTCCATGGCCTTGTCACATGGCTAGACCTACGTCTTGCGGAAGATTGTGCGGGAAAACGTTATTATGCACGAATCATACATGCGAATTGATTTGTCATAAAATACCATCATCTGAAGAAAATAAGAATGGTACCCCGTGTATGGAGTGTGAAAAACCATGTTTACTTCCACGACCACAAGGATGCACACATTTATGCTCAGAACCTTGTCATCCTGCACCATGTAGCCCTTGCAAACAATTGGTTAAAATTTCATGCCATTGTGGTATAAGCACTTTATACCATAGATGTTCTGAATTAACATCAGCTAAAGCTGAAAGACATAATGAATTGCTCAAATGCGGGAATCAATGCCCCAAAAATTATCCTTGTGGACATCGATGTATAAATGATTGTCATCCTGGTCCATGCAAGAATGAAAAGGAATGCAACAAGAAGGTGAAGCTGTTTTGCGTGTGCAGACGTATTAAGAAAGATTTTATCTGTTCCGTGGTGCAGAAAGAGGAAATCTGTATAAAATGCGATGATATTTGTGCCAAACTAATAAACGAAAAACGTCAAGCCGAAGCTGCTTTATTAGAACAAAAGCGGCAAGCTGAAGAAATACGTAATCAACAAGAAATAGAGAAATTTGAACGAAAATTTAAACCTCGTCGCAAGGGAAAGGATAAATTCGATAAAAAACAATTACAAAATGAGACATGTAATAATTATAGAAAATATTGGATTTTAGGCATTTTAATATGTACAATAGGTATAGTAATATTTTACATGACTGCTCAACAATTGTGA
Protein Sequence: MQKFRQAQAENKIAINKHLEANAYLESSSEDEDDRNEEDIQNIVGKVISAYQGKEADAEKILSYLINIFQSGNAVCLICISTVKRADPIWNCNKCFAFLHLSCILHWIQDSLNIKREKGITSIWACPKCRMEYNQDDIPRNYKCFCKKTIDPPYSPWNIPHSCGETCDKLLQPECGHKCVLLCHPGPCPPCAKTVSIKCYCGKQMPQQRRCNAKEWSCGTECNKEYKLCSHTCKEMCHSGECPPCPEILLLECHCKSNKELKQCSEGLWTCNKLCGRPLSCNVHICQSKCHLMGDCGPCPLEKNRTCPCGKKRYAISCKQEQLPTCGDTCGKLLNCGSHYCNMRCHTDRCGQCLEVVTKSCRCGSYQKEIACGKEFHCNKKCMQMRLCGRHLCNKKCCDCLIKNTYNMCEKVCDNALNCRKHKCAAPCHSGPCYPCARTDVIQCRCGYNKITVPCGTVKKIKPPSCNKPCKIPPICHHPKRETHKCHQGHCPPCKKICGMVYKRCGHSCVAVCHTKVWLKVSKNDIKTQPAGPWDIQKETYQLKTLPCPPCEVSVQVTCLGGHETRPWPCHMARPTSCGRLCGKTLLCTNHTCELICHKIPSSEENKNGTPCMECEKPCLLPRPQGCTHLCSEPCHPAPCSPCKQLVKISCHCGISTLYHRCSELTSAKAERHNELLKCGNQCPKNYPCGHRCINDCHPGPCKNEKECNKKVKLFCVCRRIKKDFICSVVQKEEICIKCDDICAKLINEKRQAEAALLEQKRQAEEIRNQQEIEKFERKFKPRRKGKDKFDKKQLQNETCNNYRKYWILGILICTIGIVIFYMTAQQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00217442;
90% Identity: iTF_00217442;
80% Identity: -