Mlig013883.1
Basic Information
- Insect
- Megachile ligniseca
- Gene Symbol
- nfxl1
- Assembly
- GCA_945859565.1
- Location
- CAMAOB010000096.1:119583-122320[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1.1 1.2e+04 -3.2 1.1 15 19 126 130 125 130 0.81 2 17 0.37 4.2e+03 -1.8 0.5 4 10 161 167 161 167 0.93 3 17 5.6e-08 0.00063 20.0 15.1 1 18 175 191 175 192 0.98 4 17 2.7e-08 0.00031 21.0 15.0 1 19 229 246 229 246 0.94 5 17 5.8e-05 0.66 10.4 11.7 1 19 281 300 281 300 0.92 6 17 4.1e-05 0.47 10.9 9.2 1 18 336 353 336 354 0.97 7 17 0.0068 78 3.8 7.6 1 12 388 399 388 399 0.94 8 17 1.2 1.4e+04 -3.4 1.7 6 10 409 413 409 413 0.97 9 17 1.1e-07 0.0012 19.1 12.9 1 18 419 436 419 437 0.91 10 17 1.7 1.9e+04 -3.9 1.3 6 10 466 470 465 470 0.76 11 17 0.0001 1.2 9.6 9.8 9 19 485 495 483 495 0.90 12 17 0.0013 15 6.1 4.7 1 12 505 515 505 515 0.95 13 17 0.85 9.7e+03 -2.9 5.8 14 18 547 551 547 552 0.89 14 17 0.00088 10 6.6 7.9 1 12 588 599 578 599 0.90 15 17 2 2.3e+04 -4.4 3.8 6 10 614 618 610 618 0.71 16 17 0.005 57 4.2 16.4 4 19 628 643 626 643 0.91 17 17 5.8e-06 0.066 13.6 10.3 1 16 688 702 688 708 0.90
Sequence Information
- Coding Sequence
- ATGCAAAAATTCAGGCGTGCTCAAGTAGAAAATAAAATAGCAATTAATAAGCATTTAGAAGCTAATGCCTATTTAGAATCATCCAGCGAAGATGAAGATGATAGAAATGAAGAGGATATGCAGAATGTGGTTGAAAAAGTATTATCTGCTTATCAAGGGAAAGAAGAAGATTCTGAAAAGATTTTATCATATTTAGTTAATATTTTTCAATCTGGCAGTGCAGTCTGTTTAATTTGTATTTCAACTGTAAAGAAGGCAGATGCGATTTGGAATTGTGATAAGTGTTATGCTTTTCTACATTTATCATGTATTTTACATTGGATCCGGGATAGTTTAAATGTTAAGCATGAAAAAGGAATTGCACCAGTATGGGCATGTCCAAAGTGTCGTAAGGAATACGAGGAAAAAGAAGTTACTTATAATTATAAATGTTTCTGTAAAAAGGTTGTAGATCCTTCGTATTATCCATGGAATATTCCGCATTCTTGTGGAGACACTTGTGGAAAATCTCTGCAACCAGAATGTGGTCACAAATGTGTTTTACTTTGCCATCCAGGACCATGTCCTCCTTGTGCAAAAATGGTGTCAATAAGATGTTACTGTGGCAAACAAATGCCTCAGCCACGGCGATGTAATTCAAAGGAATGGAGCTGTGGTACTGTATGCAATAAGAAGTATAAACTATGTTCACATACTTGTACGGAAGTATGTCATACAGGCGAATGTCCTCCTTGTAAAGAAGAACTATTGGTAGAGTGTCATTGTAAAAGTAATAAAGCAATTAGGCAGTGCTTTGAGGGTTCCTGGATTTGTGACATACCTTGCCGCAAACCACTTTCTTGTAACGTTCATATCTGCCAAAGTACATGTCATTTACCTGGTGATTGTGGGAACTGCCCTTTAGAGAAAAATAGAACATGTCCTTGTGGAAAGAAGCGATATGTGGTATCTTGCAAACAAGAACAGTTACCAACGTGTGGAGACACATGTGGTAAATTGCTAGATTGTGGTTCACATTATTGTAATATGAGATGCCACACGGATCGATGCGGTCAATGTTTAGAGGTAGTAACAAAATCGTGTCGGTGCGGTAGTTATCAAAAAGAAATTGCATGCGGTAAAGAATTTCATTGCAATAAGAAATGCACGCAAATGCGTCTGTGTGGGAGGCATTTATGTAATAAAAAATGTTGTGACTGCCTTATCAAGAATATATACAATATATGTGAAAAGGTTTGCGACAATACTTTGAACTGCCGTAAGCACAAATGTGCTGCTCCATGTCATAGCGGTCCTTGCTATCCATGCGAAAGAACGAATATTATTCAATGCAGATGTGGTTACAAAAAAATAACAGTACCATGTGGTACAATGAAAAAGATCAAACCACCACCTTGTAATAAGCCATGCAAAGTACCACCAATTTGTCACCATCCTAAAAGAGAAACGCACAAATGTCATCAAGGTCCATGTCCACCCTGTAAAAAGATGTGTGCTTTAGTTTATAAACGATGCGGTCACTATTGCGTTGCTGTTTGCCACACAAAAGTCTGGGTAAAAGTAAAGAAAAACGATGGTAAAACACAACCCATAGGACCATGGGAGATACAGAAGGAAACTATGCAACTTAAAACATTGCCATGTCCTCCATGTGAAGTGTCCGTTCCAGTCACTTGTCTAGGAGGGCATGAAACACGTCCTTGGCCATGCCATGCAGCTAAACCTACTTCCTGTGGAAGACTTTGCGGTAGATTATTACCGTGTACTAATCATAGATGCGAATTAGTTTGTCATAGAATACCATCCGAAGATGTTAAGAACAGTATTCCATGCATGGAATGTGAAAAGCCATGCTTATTTCCACGACCACAAGGTTGCACTCATTTGTGTCCAAAACCATGTCATCCAGCACCTTGCAGTCCTTGTAAGCAACTAGTCAAAATGTCATGTCATTGTGGCATAGGAACTCTTTATAGAAGATGCTCAGAGTTAACGTCAGCTACAAGCGAACAGCGTAATGAATTACTGAAATGTGGAAACCAATGCCCAAAAAATTATGCTTGTGGACATAGATGCATGAACAATTGCCATTCTGGCCCATGTACAAATGAAAATGAATGTAACAAGAAAGTTAAGTTATTTTGTCCGTGCAAACGTATTAAAAAAGATTATATATGCTCGGTGGTGCAGAAACAAGAAATTTCTATAAACTGCGACGATATTTGTATCAAGTTGAAGAACGAGAAGCGTCAAGCTGAAGCTGCGTTGTTGGAACAAAAACGACAAGCAGAGGAAATGCGTAATCAAGAAGAAATAAAAAAATTCGAACGAAAATTCAAATCTCGACGTAAAGGAAAAGATAAATTTGATAGGAAACAATTGCAGGAAGAAACTAGTAGCAATTATATGAAATACTGGATTTTAGCTGTATTAATATGTTTGATAAGTTTTTCAATATACTATATAAATATCAATAAATTGCAATAG
- Protein Sequence
- MQKFRRAQVENKIAINKHLEANAYLESSSEDEDDRNEEDMQNVVEKVLSAYQGKEEDSEKILSYLVNIFQSGSAVCLICISTVKKADAIWNCDKCYAFLHLSCILHWIRDSLNVKHEKGIAPVWACPKCRKEYEEKEVTYNYKCFCKKVVDPSYYPWNIPHSCGDTCGKSLQPECGHKCVLLCHPGPCPPCAKMVSIRCYCGKQMPQPRRCNSKEWSCGTVCNKKYKLCSHTCTEVCHTGECPPCKEELLVECHCKSNKAIRQCFEGSWICDIPCRKPLSCNVHICQSTCHLPGDCGNCPLEKNRTCPCGKKRYVVSCKQEQLPTCGDTCGKLLDCGSHYCNMRCHTDRCGQCLEVVTKSCRCGSYQKEIACGKEFHCNKKCTQMRLCGRHLCNKKCCDCLIKNIYNICEKVCDNTLNCRKHKCAAPCHSGPCYPCERTNIIQCRCGYKKITVPCGTMKKIKPPPCNKPCKVPPICHHPKRETHKCHQGPCPPCKKMCALVYKRCGHYCVAVCHTKVWVKVKKNDGKTQPIGPWEIQKETMQLKTLPCPPCEVSVPVTCLGGHETRPWPCHAAKPTSCGRLCGRLLPCTNHRCELVCHRIPSEDVKNSIPCMECEKPCLFPRPQGCTHLCPKPCHPAPCSPCKQLVKMSCHCGIGTLYRRCSELTSATSEQRNELLKCGNQCPKNYACGHRCMNNCHSGPCTNENECNKKVKLFCPCKRIKKDYICSVVQKQEISINCDDICIKLKNEKRQAEAALLEQKRQAEEMRNQEEIKKFERKFKSRRKGKDKFDRKQLQEETSSNYMKYWILAVLICLISFSIYYININKLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00217442;
- 90% Identity
- iTF_00962881; iTF_00964171; iTF_00964811; iTF_00962197;
- 80% Identity
- -