Schi023871.1
Basic Information
- Insect
- Schlechtendalia chinensis
- Gene Symbol
- bab2
- Assembly
- GCA_019022885.1
- Location
- CM032341.1:18515357-18518483[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.2e-12 1.8e-08 34.4 0.0 2 38 422 459 421 464 0.89 2 4 1.1e-12 2.5e-09 37.1 0.1 2 39 476 513 475 516 0.94 3 4 1.2e-16 2.6e-13 49.8 0.0 3 45 532 575 530 575 0.97 4 4 3.5e-17 7.6e-14 51.6 0.1 1 43 582 625 582 627 0.96
Sequence Information
- Coding Sequence
- ATGACAGTTAACGGCCAGCATTACTGTCTGCGATGGAACAATTATCAATCAAACATGACCTCTGTGTTTCATCAACTACTGCGGAATGAATCTTTTGTCGATGTCACACTTGCTTGCAATGAGAGCACACTTAAAGCGCACAAAGTAGTCTTATCAGCTTGTTCATCATACTTTCAAAAACTATTGATGGACAATCCATGTAAACATCCAACTATCATATTGCCATATGACATTTGTTTTAATGATTTAAAGTTTATCATCGAGTTCGTGTACAGGGGTGAAATTGATGTGTCTCAAGCTGAGTTACAGTCTCTTCTAAAAACTGCAGACCAATTGAAAATTAAAGGATTGTGTGAAGTGCCTGAAGACGAACGTGATACGTCTATTGTTGCTGAAGTAACGCCATTAGGGCCATTAAAAACTGGTGGAAGGGTGTTTACCAAATTACAACGTAGAACTTCACCTTATTCAAAAAAATTAAATAGTCCCAATCATATTCAACAAGATCAGTTTAACAGAAGTTATTATCGAATCGAACAATCTGGTTTCCCTCCTATTAATGTCGATCATGAGAACAAATCCATAAATTCTATCCACTGCATGACTGTAGCTACATCAACCGAAGACGATGAGAAAGATGTAAAATCAACCTTAACTGATTTGCCGGTTGTCATACTAGAACCACATCCTACATTAAGTTTGCAAGCCCAACAACAGCCTCAGATAGTTCACATACCTATACCGCAACAACAATTGAACCATGTGACTCAACATTCAAATCAACCACAGTTGCAACAAGCTTCTGTTCAAACTCATTCACAAATGATAATCACAAATGGTCCAGTTATGACGGTGAATGAAGCTGATATGACACCTGACATACAGCCTGTTGGACCAAGGGCGACGCCAGTACCAGTAAAAAATAACAGAAGTCCCTCATCAACACCTACTCATAGAGATATGGCTGTTGGTACATCGTGTTCAAATGATATGATGAGAAGTGATGGAAGCGAAGTGAAATTTGAAACTGTCAAATTTGAAACACTTCGTACTATTGACCAATCATCTGATACAATTGGAATAGAAAGACAACATTCTAGCGACCGTAATATAACTGATGAAGACAATTCAATGCATACAATGATGATAACACCTGAACTTTTGGGCTTATTACCGAATTCTAACACAGGAGATGTCAGTGAAGACGGTTCTAGTAACAGTGTAAATAAACATTACGGTACAAATGGTGGAAAAGGATGGACAGCCGATGATATGGAAAACGCCTTAGAAGCGTTGCGTTCACATAACATGTCCTTAACGAAAGCATCCATAACATTTGGAATTCCTTCAACAACGTTATGGCAGCGAGCTCATCGAGCCGGTATAGATACTCCAAAAAAAGACGGACCTGCCAAATCTTGGAACGATGAAGCCTTGAACATTGCATTAGAAGCTCTGCGCACTGGTTCCATTTCAGCAAATAAAGCCAGCAAGGCTTATGGCATACCTAGTAGTACCTTGTATAAGATTGCACGGCGGGAAGGTATTCGACTGGCTGCTCCGTTCAATGCAGCGCCAACATCATGGGGCCAGGAACAGTTAGATCAGGCTTTACATGCCATACGGACCGGCCAAACAACCGTGCAACGGGCTGCAGCCGATTATGGCATACCTTCTGGTACATTGTACGGTCGGTGTAAACGTGAGAAAATTGAATTGTCTCGCAGCAACCCAACTCCGTGGTCTGAGGACGCCATGATGGAGGCTTTGGAGTCTGTGCGATTAGGCCACATGAGTATTAATCAGGCGGCTATACATTATAATCTTCCATATTCTTCGTTGTACGGTCGTTTTAAGAGAGTGAAATATGGAGCTGGACACCCTGATGACGATTGCGATGATATAATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACGTCTAGTTGA
- Protein Sequence
- MTVNGQHYCLRWNNYQSNMTSVFHQLLRNESFVDVTLACNESTLKAHKVVLSACSSYFQKLLMDNPCKHPTIILPYDICFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPEDERDTSIVAEVTPLGPLKTGGRVFTKLQRRTSPYSKKLNSPNHIQQDQFNRSYYRIEQSGFPPINVDHENKSINSIHCMTVATSTEDDEKDVKSTLTDLPVVILEPHPTLSLQAQQQPQIVHIPIPQQQLNHVTQHSNQPQLQQASVQTHSQMIITNGPVMTVNEADMTPDIQPVGPRATPVPVKNNRSPSSTPTHRDMAVGTSCSNDMMRSDGSEVKFETVKFETLRTIDQSSDTIGIERQHSSDRNITDEDNSMHTMMITPELLGLLPNSNTGDVSEDGSSNSVNKHYGTNGGKGWTADDMENALEALRSHNMSLTKASITFGIPSTTLWQRAHRAGIDTPKKDGPAKSWNDEALNIALEALRTGSISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWGQEQLDQALHAIRTGQTTVQRAAADYGIPSGTLYGRCKREKIELSRSNPTPWSEDAMMEALESVRLGHMSINQAAIHYNLPYSSLYGRFKRVKYGAGHPDDDCDDIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00184731;
- 90% Identity
- iTF_01330721; iTF_00135522; iTF_01305458; iTF_01305778; iTF_00135226; iTF_01432933; iTF_01434178; iTF_01346374; iTF_01346562; iTF_00340713; iTF_00340487; iTF_01169999; iTF_01169764; iTF_00136048; iTF_00136263; iTF_01304980; iTF_01304772; iTF_00019381; iTF_00018926; iTF_01347349; iTF_01346988; iTF_01032790; iTF_01033127; iTF_00308952; iTF_00308751; iTF_00940281; iTF_00941783; iTF_00134618; iTF_00134146; iTF_00184731; iTF_00184502; iTF_01032271; iTF_01167796; iTF_01031861; iTF_01167514; iTF_01499771; iTF_01499562; iTF_00468860; iTF_00469060; iTF_00463263; iTF_00463461; iTF_00972959; iTF_00973171; iTF_01304319; iTF_01304097;
- 80% Identity
- iTF_01330721;