Asol020775.1
Basic Information
- Insect
- Aulacorthum solani
- Gene Symbol
- bab2
- Assembly
- GCA_008528875.1
- Location
- PVMI01000105.1:3769-7988[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-11 2.7e-08 34.4 0.0 2 38 421 458 420 463 0.89 2 4 8.8e-12 2.3e-08 34.6 0.1 2 39 475 512 474 515 0.94 3 4 1.5e-16 3.9e-13 49.9 0.0 3 45 531 574 529 574 0.97 4 4 4.3e-17 1.1e-13 51.6 0.1 1 43 581 624 581 626 0.96
Sequence Information
- Coding Sequence
- ATGACAGTTAATGGCCAGCATTACTGTCTGCGATGGAACAATTACCAATCAAATATGACCTCTGTGTTTCATCAGCTTCTTCGAAATGAATCGTTTGTCGATGTTACTCTTGCTTGCAATGAGAGCACACTCAAAGCACACAaaGTTGTCTTATCGGCTTGTTCGTCAtactttcaaaaactattgatGGATAACCCATGTAAACATCCAACTATTATACTGCCTTATGATGTTTGTTTTAACGATCTTAAGTTCATTATAGAGTTTGTGTATAGAGGCGAGATTGATGTGTCTCAAGCTGAATTACAGtCTCTTCTAAAGACAGCTGACCAGTTAAAGATTAAAGGACTCTGTGAAGTGCCTGAAGATGAACGTGATACATCTATTATCGCTGAAGTAACTCCTTTAGGACCATTAAAAAGTGGTGGAAGAGTGTTCACAAAATTACAACGCAGAACTTCtccttattcaaaaaaaatgagcCCTAATCAAATTCAGCAGGATCAGTTTAATCGGAGTTATTATCGAATTGAACAATCGGGTTTTGCACCTATCAGTGTTGaacaagaaaataaatctatgaatACTATCCATTGCATGACTGTAGCAACATCAACTGAAGATGATGAGAAAGAAATGAAGTCAACACTAACAGATTTACCAGTCGTCATACTAGAGCCACATCCTACACTAAGTTTACAAGGCCAACAACAGTCCCAGATagttcatatacctataccacaacaacaacaacaacaacaacaaatgaGCCATGTAACACAACATACAAATCAACCACAGTTACAGCAAGCTGCAGTTCAAACTCATtcacaaatgATTATCACAACAGGTCCAGTTATGACGGTAAATGAAGCTGATATTACACCTGATATACAGCCTGTTGGACCAAGGGCAACACCAGTaccagttaaaaataatacaagtcCCTCATCAACTCCTACACATAGAGATATGGCtgttggtACATCGTGCTCAAATGATATGATGAGAAGTGATGGAAGTGAAGGAAAATTTGAAAGTGCTAAATTTGAAACACTTCGTACTATTGATCAATCATCAGATGCAATCGGAATAGAAAGACAACATTCTAATGaccACAATTCAATGCATACCATGATGATAACACCTGAACTTTTGGGCTTACTACCAAATTCGTCTAATACAGGAGatgtTAGTGAAGATAGTTctagtaacaatataaataaacagtacGGTACAAATAGTGGCAAAGGATGGACAGCTGATGATATGGAAAACGCCTTAGAGGCATTACGTTCACATAATATGTCCTTGACTAAAGCATCCATAACATTTGGGATTCCTTCTACAACATTGTGGCAGCGAGCTCATCGAGCTGGTATAGATACTCCTAAAAAGGACGGACCAGCTAAATCTTGGAACGATGAAGCTTTAAACATTGCATTAGATGCTCTTCGCACTGGAACTATTTCGGCAAATAAAGCTAGTAAAGCTTATGGCATACCTAGTAGCACATTATACAAGATTGCCCGGCGGGAAGGCATTAGATTAGCGGCTCCATTCAATGCGGCACCAACATCTTGGGGTCAGGAGCAGTTAGACCAGGCATTACATGCTATACGAACTGGGCAAACGACTGTGCAACGAGCAGCGGCCGATTATGGTATACCTTCTGGTACACTATATGGACGGTGTAAACGTGAGAAAATTGAATTGTCCCGCAGCAATCCAACTCCATGGTCTGAGGATGCTATGATGGAAGCTTTGGAATCTGTGCGATTAGGTCATATGAGTATTAATCAGGcagctatacattataatctaCCATATTCTTCGTTATATGGACGTTTCAAAAGGGTAAAATATGGAGCAGGACATCCAGATGATGATTGCGATGATATGATTGATTCAGATACACAAGGTGAACAACAGCACattcaacaacaacaacaacaacaacaacagcagcagcaacagcaggcAAATCAGCAAGTTCAGGCTACACCAGTGTCCCAAATAATGTTGGTTCAATATCCAGCTCCACAGATTCAAATGTACCAACAACATCCAACTCATTCAACCGCTAGTTGA
- Protein Sequence
- MTVNGQHYCLRWNNYQSNMTSVFHQLLRNESFVDVTLACNESTLKAHKVVLSACSSYFQKLLMDNPCKHPTIILPYDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPEDERDTSIIAEVTPLGPLKSGGRVFTKLQRRTSPYSKKMSPNQIQQDQFNRSYYRIEQSGFAPISVEQENKSMNTIHCMTVATSTEDDEKEMKSTLTDLPVVILEPHPTLSLQGQQQSQIVHIPIPQQQQQQQQMSHVTQHTNQPQLQQAAVQTHSQMIITTGPVMTVNEADITPDIQPVGPRATPVPVKNNTSPSSTPTHRDMAVGTSCSNDMMRSDGSEGKFESAKFETLRTIDQSSDAIGIERQHSNDHNSMHTMMITPELLGLLPNSSNTGDVSEDSSSNNINKQYGTNSGKGWTADDMENALEALRSHNMSLTKASITFGIPSTTLWQRAHRAGIDTPKKDGPAKSWNDEALNIALDALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWGQEQLDQALHAIRTGQTTVQRAAADYGIPSGTLYGRCKREKIELSRSNPTPWSEDAMMEALESVRLGHMSINQAAIHYNLPYSSLYGRFKRVKYGAGHPDDDCDDMIDSDTQGEQQHIQQQQQQQQQQQQQQANQQVQATPVSQIMLVQYPAPQIQMYQQHPTHSTAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00184731;
- 90% Identity
- iTF_01330472;
- 80% Identity
- iTF_00184731;