Mper009548.1
Basic Information
- Insect
- Myzus persicae
- Gene Symbol
- bab2
- Assembly
- GCA_001856785.1
- Location
- NW:199462-207339[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-11 1.1e-08 34.4 0.0 2 38 425 462 424 467 0.89 2 4 1.6e-11 9.3e-09 34.6 0.1 2 39 479 516 478 519 0.94 3 4 2.8e-16 1.6e-13 49.9 0.0 3 45 535 578 533 578 0.97 4 4 9.6e-17 5.4e-14 51.3 0.1 1 43 585 628 585 630 0.96
Sequence Information
- Coding Sequence
- ATGACAGTTAATGGCCAGCACTACTGTCTGCGATGGAACAATTACCAATCAAATATGACCTCTGTGTTTCATCAGCTTCTTCGAAATGAATCATTTGTTGACGTTACTCTTGCTTGCAATGAGAGCACACTTAAAGCACACAAAGTTGTTTTATCGGCTTGTTCGTCATACTTCCAGAAACTATTGATGGATAACCCATGTAAACATCCAACCATTATACTGCCTTATGATGTTTGTTTTAACGATCTTAAGTTCATAATAGAGTTTGTGTATAGAGGTGAGATTGATGTGTCTCAAGCTGAATTACAAtcTCTTCTCAAGACAGCTGACCAGTTAAAGATTAAAGGACTATGTGAAGTGCCTGAAGATGAACGTGATACATCTATTGTTGCGGAAGTAACTCCTCTAGGACCATTAAAAAGTGGCGGAAGAGTGTTCACAAAATTACAACGCAGAACTTCtccttattcaaaaaaattgagccCTAATCAAATTCAGCAGGATCAGTTTAATCGGAGTTATTATCGAATTGAACAATCTGGTTATGGGCCTATCAGTGTTGATCAAGAAAACAAATCTATGaatactATTCATTGCATGACTGTAGCAACATCAACTGAAGATGATGAGAAAGAAATGAAGTCGACACTAACAGATTTACCAGTGGTCATACTAGAGCCACATCCTACACTAAGTTTACAATCTCAACAACAGTCCCAGATAGTTCACATACCTCTACCACAACAGCAACCACAGCAAATGAGCCATGTAACACAACATACAAATCAATCACAGTTGCAGCAAGCTGCTGTTCAAACCCATtcacaaaTGATTATCACAACAGGTCCAGTTATGACAGTAAATGAAGCTGATATTACGCCGGATATACAGCCTGTTGGTCCAAGGGCAACACCTGTaccagtaaaaaataatacaagtccCTCATCAACTCCTACACATAGAGATATGGCtgttggtaCATCGTGTTCAAATGATATGATGAGAAGTGATGGAAGTGAAGGAAAATTTGAAAGTGCTAAATTTGAAACACTTCGTACTATTGATCAATCATCAGATGCAATTGGAATAGAGAGACAACATTCTAATGaccgtAATATAAATGATGAAGACAATTCAATGCATACAATGATGATAACACCTGAACTTTTGGGCTTACTACCGAATTCTTCTAATACAGGagatGTCAGTGAAGATGGTTCTAGTAACAATATTAGTAAACCGTATGGTACAAATAGTGGCAAAGGATGGACAGCTGATGATATGGAAAACGCCTTAGAGGCATTACGTTCACATAATATGTCTTTGACTAAAGCATCCATAACATTTGGGATTCCTTCTACAACATTGTGGCAGCGAGCTCATCGAGCTGGTATAGATACTCCTAAAAAAGACGGACCAGCTAAATCTTGGAATGATGAAGCTTTAAACATTGCATTAGATGCTCTCCGCACTGGAACTATTTCTGCAAATAAAGCTAGTAAAGCTTATGGCATACCTAGTAGTACATTATACAAGATTGCTCGGCGGGAAGGCATTAGATTAGCGGCTCCATTCAATGCGGCACCAACATCTTGGGGTCAAGAGCAGTTAGACCAGGCATTGCATGCTATACGAACTGGTCAAACAACTGTGCAACGAGCAGCAGCCGACTATGGTATACCTTCTGGTACACTGTATGGCCGGTGTAAGCGCGAGAAAATTGAATTGTCCCGCAGCAATCCTACCCCATGGTCTGAGGAAGCTATGATGGAAGCTTTGGAATCCGTGCGATTAGGTCATATGAGTATTAATCAGGCAGCTATACATTATAATCTACCTTATTCTTCGTTATACGGACGTTTCAAAAGAGTGAAATATGGAGCAGGACATCCAGATGATGATTGTGATGATATGATTGATTCAGATACACAAGGCGAACAACAGCAcattcaacaacaacaacaacaacaacaacaacaacagcagcaacaacaacaggcGAATCAGCAAGTTCAGGCTACACCAGTGTCCCAAATAATGTTGGTTCAATATCCAGCGCCACAGATTCAAATGTACCAACAACATCCAACTCATTCAACCACTAGTTGA
- Protein Sequence
- MTVNGQHYCLRWNNYQSNMTSVFHQLLRNESFVDVTLACNESTLKAHKVVLSACSSYFQKLLMDNPCKHPTIILPYDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPEDERDTSIVAEVTPLGPLKSGGRVFTKLQRRTSPYSKKLSPNQIQQDQFNRSYYRIEQSGYGPISVDQENKSMNTIHCMTVATSTEDDEKEMKSTLTDLPVVILEPHPTLSLQSQQQSQIVHIPLPQQQPQQMSHVTQHTNQSQLQQAAVQTHSQMIITTGPVMTVNEADITPDIQPVGPRATPVPVKNNTSPSSTPTHRDMAVGTSCSNDMMRSDGSEGKFESAKFETLRTIDQSSDAIGIERQHSNDRNINDEDNSMHTMMITPELLGLLPNSSNTGDVSEDGSSNNISKPYGTNSGKGWTADDMENALEALRSHNMSLTKASITFGIPSTTLWQRAHRAGIDTPKKDGPAKSWNDEALNIALDALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWGQEQLDQALHAIRTGQTTVQRAAADYGIPSGTLYGRCKREKIELSRSNPTPWSEEAMMEALESVRLGHMSINQAAIHYNLPYSSLYGRFKRVKYGAGHPDDDCDDMIDSDTQGEQQHIQQQQQQQQQQQQQQQQANQQVQATPVSQIMLVQYPAPQIQMYQQHPTHSTTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00184731;
- 90% Identity
- iTF_01330472;
- 80% Identity
- iTF_01033127;