Dpla002489.1
Basic Information
- Insect
- Drepanosiphum platanoidis
- Gene Symbol
- bab2
- Assembly
- GCA_948098885.1
- Location
- OX402531.1:15791963-15796756[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.8e-12 1.5e-08 34.0 0.0 3 38 423 459 421 464 0.90 2 4 4.1e-12 1.1e-08 34.5 0.1 2 39 476 513 475 516 0.94 3 4 3.9e-17 1e-13 50.6 0.0 3 45 532 575 530 575 0.97 4 4 2e-17 5.2e-14 51.5 0.1 1 43 582 625 582 627 0.96
Sequence Information
- Coding Sequence
- ATGACAGTTAATGGCCAGCATTACTGTCTCCGCTGGAATAATTACCAATCAAATATGACTTCTGTGTTTCATCAACTTCTACGTAACGAATCATTTGTTGATGTCACCCTAGCATGCAATGAGAGTACACTAAAAGCCCACAAAGTAGTCTTATCGGCTTGTTCATCATACTTTCAGAAATTATTGATGGACAACCCATGTAAACACCCAACGATCATACTGCCCTATGATGTTTGTTTCAATGATCTTAAGTTTATCATCGAGTTTGTTTATAGAGGTGAAATTGATGTGTCACAAGCTGAATTACAATCTCTTCTAAAGACAGCTGACCAGTTAAAAATCAAAGGATTGTGTGAAGTGCCTGAAGATGAACGCGATACATCTATCGTTGCTGAAGTAACACCTTTAGGACCATTGAAAAGTGGAGGAAGAGTTTTTACAAAACTACAACGCAGAACTTCGCCTTATTCAAAAAAAATGAGTCCGAATCATATTCAGCAGGATCAGTTTAATCGCAACTATTATAGAATTGAACAGTCAGGATTTGCACCAATCAATATTGACCAAGAGAACAAATCTGTGAATTCTATCCATTGTATGACGGTAGCTACATCAACTGAAGATGACGAGAAAGAAATGAAATCAACATTAACAGATTTACCGGTTGTCATACTAGAGCCACATCCATCATTAAATTTACAAACCCAACAACAACCTCAGATAGTTCACATTCCAATATCACAACAACAACTAAATCATGTCACTCAACATCCAAATCAACCTCAATTGCAGCAAGCAGCTGTTCAAACCCATTCACAAATGATCATCACAACAGGCCCAGTTATGACTGTGAACGAGTCTGATATTGCGCCTGATATACAACCTGTTGGGCCAAGAGCAACACCAGTGTCGGTAAAAAATAACACAAGTCCCTCGTCTACACCTACACATAGAGATATGGCTGTTGGTACTTCATGTTCAAGTGATGTGATGAGAAGTGATGCAAATGATGTAAAATTTGAAAGTAGTAAATTTGAAACACTTCGTACTCTTGATCAATCAACTGATGCCATTGGATTAGAAAGACAACACACGAGTGATCATAGTATAAATGATGAAGAAAATTCAATGCATACCATGATGATAACACCGGAACTATTAGGTTTATTACCAAATTCTTCTAATGGAGGAGATGTCAGTGAAGATGGCTCAAGCAACAATATAAATAAACAGTACGGTGCTAATGGTGCCAAAGGATGGTCAACTGATGATATGGAGAATGCTTTAGAAGCGCTGCGTTCACATAACATGTCTTTGACTAAGGCTTCTATAACATTTGGAATTCCCTCTACAACATTATGGCAGCGAGCTCATCGAGCCGGTATAGATACTCCTAAAAAAGATGGACCCGCTAAATCTTGGAACGACGAAGCTTTAAATATTGCATTAGATGCCCTACGCACTGGAACTATTTCAGCAAATAAAGCCAGTAAAGCGTATGGTATTCCCAGTAGTACTTTATACAAGATTGCTAGGCGGGAGGGTATTCGATTAGCCGCCCCATTTAATGCAGCGCCAACGTCTTGGGGACAGGAGCAGTTAGACCAAGCGTTGCATGCTATAAGAACTGGCCAAACTACTGTGCAGCGAGCTGCAGTCGACTATGGTATTCCTTCTGGTACATTGTATGGGCGGTGCAAACGTGAAAAAATTGAATTGTCCCGTAGCAATCCTACACCGTGGTCTGAAGATGCGATGATGGAAGCTTTGGAATCTGTACGCTTAGGGCATATGAGTATCAATCAGGCGGCTATACATTATAACCTGCCGTATTCTTCATTGTATGGCCGTTTTAAAAGGGTTAAATATGGAGCTGGACATCCTgacgatgattgtgatgatatgattgattcagatacacagggtgaacaacagcatatgcaacaacagcagcagcagcagcaacaacaacaacaacaacaacagcaacaacaacaacaacaacaacagcagcagcagcagcagcagcagcaacaacaacagcagcagcagcagcagcaacaacaacaacaacaacaacaacaacaacaacaacagcagcagcagcaacagcaacaaccttcaaatcagcaagttcaagccacaccagtatcgcaaatcatgcttgtacaatatccagcaccgcaaattcaaatgtaccaacaacatccCACTCACTCGACAGCTAGTTGA
- Protein Sequence
- MTVNGQHYCLRWNNYQSNMTSVFHQLLRNESFVDVTLACNESTLKAHKVVLSACSSYFQKLLMDNPCKHPTIILPYDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPEDERDTSIVAEVTPLGPLKSGGRVFTKLQRRTSPYSKKMSPNHIQQDQFNRNYYRIEQSGFAPINIDQENKSVNSIHCMTVATSTEDDEKEMKSTLTDLPVVILEPHPSLNLQTQQQPQIVHIPISQQQLNHVTQHPNQPQLQQAAVQTHSQMIITTGPVMTVNESDIAPDIQPVGPRATPVSVKNNTSPSSTPTHRDMAVGTSCSSDVMRSDANDVKFESSKFETLRTLDQSTDAIGLERQHTSDHSINDEENSMHTMMITPELLGLLPNSSNGGDVSEDGSSNNINKQYGANGAKGWSTDDMENALEALRSHNMSLTKASITFGIPSTTLWQRAHRAGIDTPKKDGPAKSWNDEALNIALDALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWGQEQLDQALHAIRTGQTTVQRAAVDYGIPSGTLYGRCKREKIELSRSNPTPWSEDAMMEALESVRLGHMSINQAAIHYNLPYSSLYGRFKRVKYGAGHPDDDCDDMIDSDTQGEQQHMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPSNQQVQATPVSQIMLVQYPAPQIQMYQQHPTHSTAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00184731;
- 90% Identity
- iTF_01330472;
- 80% Identity
- iTF_00469060;