Acrc010803.1
Basic Information
- Insect
- Aphis craccivora
- Gene Symbol
- bab2
- Assembly
- GCA_009835225.1
- Location
- VUJU01001378.1:43695-50557[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.9e-11 2.2e-08 34.4 0.0 2 38 430 467 429 472 0.89 2 4 6.7e-11 3.8e-08 33.6 0.1 2 39 484 521 483 524 0.93 3 4 5.6e-16 3.2e-13 49.9 0.0 3 45 540 583 538 583 0.97 4 4 1.6e-16 9.3e-14 51.6 0.1 1 43 590 633 590 635 0.96
Sequence Information
- Coding Sequence
- ATGACAGTTAATGGCCAGCACTACTGTCTGCGATGGAATAATTACCAATCAAATATGACTTCTGTGTTTCATCAACTTCTTCGAAATGAATCGTTTGTTGATGTTACTCTTGCTTGCAATGAAAGCACGCTTAAAGCacacaaaGTGGTCTTATCGGCTTGTTCGTCATACttccaaaaattattgatgGATAATCCATGTAAACATCCAACCATTATATTGCCTTACGATGTTTGTTTTAACGATCTTAAGTTCATCATAGAGTTTGTGTATAGGGGTGAAATTGATGTGTCTCAAGCTGAATTGCAAtCTCTTCTAAAGACTGCAGATCAGTTAAAGATTAAAGGACTATGTGAAGTACCTGAAGATGAACGTGATACATCTATTGTTGCTGAAGTAACTCCTTTAGGGCCATTAAAAAGTGGTGGAAGAGTCTTCACAAAATTACAACGGAGAACTTCTccctattcaaaaaaattgagtccTAATCAAATTCAGCAGGATCAGTTTAATCGAAGTTATTATCGAATTGAACAATCAGGTTTTGCACCTGTTAATGTTGATCAAGAAAACAAATCTATTAATACTATCCATTGTATGACTGTAGCAACATCAACTGAAGATGATGAAAAAGAATTGAAGTCATCACTAACAGATTTACCGGTGGTCATACTAGAACCACATCcttcattaaatttacaagCCCAACAACAGTCCCAGATAGTTCACATACCAATACCACCatcacaacaacaacaacaacagcaacagcaatTAAGTCATGTAACACAACATACAAATCAACCACAGTTGCAACAAGCTGCAGTTCAAACTCATTCACaaATGATTATCACAACAGGTCCAGTTATGACAGTGAATGAAGCTGACATTTCACCTGATATACAGCCTGTTGGACCAAGGGCAACACCAGTACCAGTAAAAAATAGCACAAGTCCTTCATCAACACCTACACATAGAGATATGGCTGtcggTACATCATGTTCAAATGATATGATGAGAAGTGATGGAAGTGAGAGAAAATTTGAAGGTACTAAATTTGAAACACTTCGTACAATTAATCAGTCATCAGATGCAATTGGAATTGAAAGACAACATTCTAATGAccgtAATATAAATGATGAAGATAATTCAATGCATACAATGATGATAACACCCGAACTTTTGGGATTATTACCAAATTCTTCTAATACAGGAGaTGTTAGTGAAGATAGttctagtaataatattaacaaacagTATGGTACAAATGGGGGAAAAGGATGGACAGCTGATGACATGGAAAATGCTTTAGAAGCATTACGTTCACATAATATGTCTTTAACTAAAGCATCCATTACATTTGGGATTCCTTCTACAACATTATGGCAGCGTGCTCATCGAGCTGGTATAGATACTCCTAAAAAAGACGGACCTGCTAAATCTTGGAACGATGAATCTTTGAACATTGCATTAGACGCTCTACGCACTGGCACAATTTCAGCAAATAAAGCTAGTAAAGCGTATGGTATACCTAGtagtacattatataagaTTGCACGGCGGGAAGGAATTAGATTAGCTGCTCCATTCAATGCGGCACCTACTTCTTGGGGTCAGGAACAGTTAGACCAGGCATTACATGCTATACGAACTGGGCAAACAACTGTACAACGAGCTGCAGCTGACTATGGTATACCTTCTGGTACACTATATGGTCGGTGTAAACGTgagaaaattgaattatctCGCAGCAATCCAACCCCATGGTCTGAGGATGCTATGATGGAAGCTCTGGAGTCTGTACGATTAGGTCATATGAGTATTAATCAGGCAGCTATACATTACAATCTACCATATTCTTCATTATATGGACGTTTCAAAAGGGTGAAATACGGAGCTGGGCATCCAGATGATGATTGTGATGAAATGATTGATTCAGATACACAAAGTGAACAACAGCACATTCAAacacaacaacaacagcagcagGCAAATCAGCAAGTACAGGCTACTCCAGTGTCTCAAATAATGTTAGTTCAATACCCAGCACCACAGATTCAAATGTACCAACAACATCCAACTCATTCAACGACTAGTTGA
- Protein Sequence
- MTVNGQHYCLRWNNYQSNMTSVFHQLLRNESFVDVTLACNESTLKAHKVVLSACSSYFQKLLMDNPCKHPTIILPYDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPEDERDTSIVAEVTPLGPLKSGGRVFTKLQRRTSPYSKKLSPNQIQQDQFNRSYYRIEQSGFAPVNVDQENKSINTIHCMTVATSTEDDEKELKSSLTDLPVVILEPHPSLNLQAQQQSQIVHIPIPPSQQQQQQQQQLSHVTQHTNQPQLQQAAVQTHSQMIITTGPVMTVNEADISPDIQPVGPRATPVPVKNSTSPSSTPTHRDMAVGTSCSNDMMRSDGSERKFEGTKFETLRTINQSSDAIGIERQHSNDRNINDEDNSMHTMMITPELLGLLPNSSNTGDVSEDSSSNNINKQYGTNGGKGWTADDMENALEALRSHNMSLTKASITFGIPSTTLWQRAHRAGIDTPKKDGPAKSWNDESLNIALDALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWGQEQLDQALHAIRTGQTTVQRAAADYGIPSGTLYGRCKREKIELSRSNPTPWSEDAMMEALESVRLGHMSINQAAIHYNLPYSSLYGRFKRVKYGAGHPDDDCDEMIDSDTQSEQQHIQTQQQQQQANQQVQATPVSQIMLVQYPAPQIQMYQQHPTHSTTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00184731;
- 90% Identity
- iTF_01330472;
- 80% Identity
- iTF_00134618;