Basic Information

Insect: Pogonomyrmex barbatus
Gene Symbol: RCOR3_1
Assembly: GCA_000187915.1
Location: NW:1004564-1023265[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 9e-10 6e-07 28.8 0.0 3 46 185 228 183 228 0.97

2 3 3.2 2.1e+03 -1.8 0.6 37 44 333 340 330 341 0.87

3 3 1.6e-12 1e-09 37.6 0.0 3 46 431 474 430 474 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	9e-10	6e-07	28.8	0.0	3	46	185	228	183	228	0.97
2	3	3.2	2.1e+03	-1.8	0.6	37	44	333	340	330	341	0.87
3	3	1.6e-12	1e-09	37.6	0.0	3	46	431	474	430	474	0.98

Sequence Information

Coding Sequence: ATGGGCAGTCTCAAGGAGAATCGTAAGCAGAAGCCGTTGGGTTCTGGGTCGGCACGTCTGCGGGTGACTCTCTGTCATCCTGCATTTCTGAGTCCTGCCGCAGCGGCACCAGGTGAATCTGTGCGATTTGGCGAACCACGAATCCTGATCGACGAGCGAACGTACACCGCGATGGTTCTAGCGGAGAGAAATTCCGAAAATGTACGAAACGGCCGTAGGTCACGAGGCCCCAGCCCTAACGCACAGACCGAATCATCCAGCGAGGAGGAAGGAGTTCCAGCAGAAAAGATAAGAGTTGGACGAGATTATCAGGTCGTTGTCCCAGAATTTGTTCCTGTTAACgaacGTCGATTGGATCAGTGTCCTGATAGGGCCTTATTAGTTTGGTCACCTACTACTGATATACCAGATCAGAAACtgGACGAATATATTATACTGGCTAAAGAAAAATACGGTTATAATGGAGAACAGGCATTGGGAATGCTATTTTGGcataaacataatttagaACGTGCGGTCTTGGACCTGGCGAATTTTACTCCATTTCCTGATGAATGGACGGTTGAAGATAAAGTATTGTTTGAACAGGCATTCCAATTTCATGGAAAGAGTTTCCACCGAATTCGGCAAATGCTACCTGACAAATCTATTGCGAGCCTCGTGAAATACTACTATAGCTGGAAGAAAACGCGAACTAGGACATCATTGATGGACAGGCAAGCACGTAAATTGACGAGCGGTTGCAAAGAAGGCGAGAATGGCAGCGAAAATGGAAGTGAACTCGGTTCCAACACAGATAGCGAATCCGAAGAAAAAAAATGGACGATCCACCGCGGAATACGTCGTGGAAAGAACCAAGCTGTGCCAGGAAGCCAAGGCACTGACGCTAAGGCCCCATCCGACTCGGAAAACGCCCCTCAGGTTCAGGGCTCGTGTAGCAACTGTGGCGTTGCATGCCATAGTGTTCGTGCGACGCCCAAAGGACACGCGTGTCATAGCTGCTATCTACATTGGAGGCGCACCGGTGTAGCAAGACCGTTAACTTCCATGCCGGGTCGtacgaataaaagaaaaccaCCCCGGGGTTTGGTTGTGAATCATGATGATTTGGCGGCTTTGGCTGGTCAACCAAATCAAGCCAACAACAGTTTGCAAGCTATCGATACTGAGATCGTTAGCTTAAAACGTCAAATACAAGCTAACAAACAACAAGTAAGCGCACTAAAGCGAAAAACAACTGATGGTATCGATCATCTACGACCGCCAGAGGTATCAAGTCGTATAAATGCTCGCTGGACAAATGATGAATTGTTGTTAGCCGTTCAAGGCATTAGAAAATATGGAAAAGATTTCGCTGCAATCGCTGAAGTTATCGGAACCAAGACCGAAGCTCATTTGCGATCATTTTTCGTGAACTATCGACGAAGATATAATTTGGATGCAGTTTTAAAGGAATTTGAAGCTGAAAATGGTCCCATTCTTATCGatgatgaaaaagaagaaaagatggatattgatcaatcaaatGATATGGCAGAATCATCTCAAAAGGGAAAAACATCCACTGGGCCTGGGCAAGTTGCTAAATAA
Protein Sequence: MGSLKENRKQKPLGSGSARLRVTLCHPAFLSPAAAAPGESVRFGEPRILIDERTYTAMVLAERNSENVRNGRRSRGPSPNAQTESSSEEEGVPAEKIRVGRDYQVVVPEFVPVNERRLDQCPDRALLVWSPTTDIPDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTRTSLMDRQARKLTSGCKEGENGSENGSELGSNTDSESEEKKWTIHRGIRRGKNQAVPGSQGTDAKAPSDSENAPQVQGSCSNCGVACHSVRATPKGHACHSCYLHWRRTGVARPLTSMPGRTNKRKPPRGLVVNHDDLAALAGQPNQANNSLQAIDTEIVSLKRQIQANKQQVSALKRKTTDGIDHLRPPEVSSRINARWTNDELLLAVQGIRKYGKDFAAIAEVIGTKTEAHLRSFFVNYRRRYNLDAVLKEFEAENGPILIDDEKEEKMDIDQSNDMAESSQKGKTSTGPGQVAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00255009; iTF_00294401; iTF_00304993; iTF_00380225; iTF_00452513; iTF_00729985; iTF_01048161; iTF_01216705; iTF_01273025; iTF_01520161; iTF_00168354; iTF_00227202; iTF_00264930; iTF_00459682; iTF_01102722; iTF_01299106; iTF_01407202; iTF_00015971; iTF_00128131; iTF_00175683; iTF_00229955; iTF_00233155; iTF_00280547; iTF_00295939; iTF_00360835; iTF_00721187; iTF_00969539; iTF_01048835; iTF_01100515; iTF_01198595; iTF_01424291; iTF_01514755; iTF_00058628; iTF_00343108; iTF_00714308; iTF_00773732; iTF_00937956; iTF_01234276; iTF_01423588; iTF_01514084; iTF_00142405; iTF_00221189; iTF_00295173; iTF_00397221; iTF_01199333; iTF_01232933; iTF_01409029; iTF_00016614; iTF_00024550; iTF_00085286; iTF_00128902; iTF_00214950; iTF_00218342; iTF_00264198; iTF_00733894; iTF_00828710; iTF_00868710; iTF_00996966; iTF_01004166; iTF_01057574; iTF_01066182; iTF_01068902; iTF_01089926; iTF_01254726; iTF_01418278; iTF_00216999; iTF_00291463; iTF_00297479; iTF_00306183; iTF_00687111; iTF_00730663; iTF_00866631; iTF_01001191; iTF_01101255; iTF_01169095; iTF_00129672; iTF_00223112; iTF_00252744; iTF_00629032; iTF_00841000; iTF_00905352; iTF_00982216; iTF_01005992; iTF_01379144; iTF_01381256; iTF_01421480; iTF_00057865; iTF_00117929; iTF_00729225; iTF_00861801; iTF_00885033; iTF_01056745; iTF_01468777; iTF_01493513; iTF_00015306; iTF_00219722; iTF_00231914; iTF_00254250; iTF_00439402; iTF_00798506; iTF_00861066; iTF_00863882; iTF_01539530; iTF_00086155; iTF_00225163; iTF_00228587; iTF_00231243; iTF_00265611; iTF_00360139; iTF_01233579; iTF_01355243; iTF_01420203; iTF_01498123; iTF_00087916; iTF_00183212; iTF_00217676; iTF_00865932; iTF_00963116; iTF_00964396; iTF_00968748; iTF_01234956; iTF_01261772; iTF_01395052; iTF_01411436; iTF_01492812; iTF_00060141; iTF_00174957; iTF_00302957; iTF_00868045; iTF_01422157; iTF_01476109; iTF_01537869; iTF_00316718; iTF_00675950; iTF_00728590; iTF_00982894; iTF_01055918; iTF_01306382; iTF_01354542; iTF_01418926; iTF_01419566; iTF_00222447; iTF_00225839; iTF_00293647; iTF_00712783; iTF_00227888; iTF_00719344; iTF_01200080; iTF_00126641; iTF_00625425; iTF_00762481; iTF_01228945; iTF_01475377; iTF_01560369; iTF_00046898; iTF_00266386; iTF_00417490; iTF_00996274; iTF_01122994; iTF_00215635; iTF_00263379; iTF_00391219; iTF_00756563; iTF_00760915; iTF_01232339; iTF_01473107; iTF_00047892; iTF_00633556; iTF_00769556; iTF_00829428; iTF_01066868; iTF_01067540; iTF_01070292; iTF_01474612; iTF_01512116; iTF_00214325; iTF_00253493; iTF_00864565; iTF_00983541; iTF_01005013; iTF_01069589; iTF_01207285; iTF_01476853; iTF_00221846; iTF_00862486; iTF_00898678; iTF_00939478; iTF_01130742; iTF_01190262; iTF_01255478; iTF_01405622; iTF_00317399; iTF_00398007; iTF_00652631; iTF_01303287; iTF_01380535; iTF_01473847; iTF_00109752; iTF_00127384; iTF_00223800; iTF_00763160; iTF_00961752; iTF_01103480; iTF_01413112; iTF_01414104; iTF_01465112; iTF_01523960; iTF_00050745; iTF_00059385; iTF_00216313; iTF_00350937; iTF_00393529; iTF_00414233; iTF_01065497; iTF_01122361; iTF_01508793; iTF_01512761; iTF_01513401; iTF_00084474; iTF_00088730; iTF_00232538; iTF_00865242; iTF_01406426; iTF_01428218; iTF_00046075; iTF_00220507; iTF_00309435; iTF_00378683; iTF_00438683; iTF_01129275; iTF_01379931; iTF_01408123; iTF_01523291; iTF_00014652; iTF_00183868; iTF_00262588; iTF_00298236; iTF_00438012; iTF_00718492; iTF_00770300; iTF_01087132; iTF_01420860; iTF_01477500; iTF_00174109; iTF_00385245; iTF_00873725; iTF_01364573; iTF_00125854; iTF_00219038; iTF_00251998; iTF_00296702; iTF_00765502; iTF_00867326; iTF_00938622; iTF_01101982; iTF_01412254; iTF_01417630; iTF_00079839; iTF_00159039; iTF_00229279; iTF_00230623; iTF_00684095; iTF_01000479; iTF_01015743; iTF_01245151; iTF_01488511; iTF_01497343; iTF_00140512; iTF_00863200; iTF_00962432; iTF_01068224; iTF_01469600; iTF_01269729; iTF_01270436; iTF_01268965; iTF_01267494; iTF_01268203; iTF_01266814; iTF_00304418; iTF_00738273; iTF_00305580; iTF_00881954; iTF_00882893; iTF_00879566; iTF_00881173; iTF_00880382; iTF_00326307; iTF_00734505; iTF_00707786; iTF_00707785; iTF_01467914; iTF_00381771; iTF_01003458; iTF_00739019; iTF_00287152; iTF_01036949; iTF_01099121; iTF_00463923; iTF_00692852; iTF_00708472; iTF_00200684; iTF_00845209; iTF_00143803; iTF_00141758; iTF_00690110; iTF_00691020; iTF_01002014; iTF_00224480; iTF_00226521; iTF_00645888; iTF_00713600;
90% Identity: iTF_00087073; iTF_00255009; iTF_00294401; iTF_00452513; iTF_00729985; iTF_01520161; iTF_00227202; iTF_00264930; iTF_01407202; iTF_00015971; iTF_00128131; iTF_00229955; iTF_00233155; iTF_00280547; iTF_00295939; iTF_00360835; iTF_01198595; iTF_01424291; iTF_01514755; iTF_00773732; iTF_01234276; iTF_01423588; iTF_01514084; iTF_00142405; iTF_00221189; iTF_00295173; iTF_01199333; iTF_01232933; iTF_01409029; iTF_00016614; iTF_00024550; iTF_00085286; iTF_00128902; iTF_00214950; iTF_00218342; iTF_00264198; iTF_00733894; iTF_00868710; iTF_01066182; iTF_01068902; iTF_01089926; iTF_01254726; iTF_01418278; iTF_00216999; iTF_00291463; iTF_00297479; iTF_00306183; iTF_00730663; iTF_00866631; iTF_01169095; iTF_00129672; iTF_00223112; iTF_00252744; iTF_00982216; iTF_01421480; iTF_00117929; iTF_00729225; iTF_00861801; iTF_00885033; iTF_00015306; iTF_00219722; iTF_00231914; iTF_00254250; iTF_00861066; iTF_00863882; iTF_01539530; iTF_00086155; iTF_00225163; iTF_00228587; iTF_00231243; iTF_00360139; iTF_01233579; iTF_01355243; iTF_01420203; iTF_00087916; iTF_00183212; iTF_00217676; iTF_00865932; iTF_00963116; iTF_00964396; iTF_01234956; iTF_01261772; iTF_01395052; iTF_00302957; iTF_00868045; iTF_01422157; iTF_01476109; iTF_01537869; iTF_00675950; iTF_00728590; iTF_00982894; iTF_01354542; iTF_01418926; iTF_01419566; iTF_00222447; iTF_00225839; iTF_00293647; iTF_00227888; iTF_00126641; iTF_00625425; iTF_00762481; iTF_01228945; iTF_01475377; iTF_00417490; iTF_01122994; iTF_00215635; iTF_00391219; iTF_00756563; iTF_00760915; iTF_01232339; iTF_01473107; iTF_00633556; iTF_00769556; iTF_01066868; iTF_01067540; iTF_01070292; iTF_01474612; iTF_01512116; iTF_00214325; iTF_00253493; iTF_00864565; iTF_00983541; iTF_01069589; iTF_01476853; iTF_00221846; iTF_00862486; iTF_00898678; iTF_01130742; iTF_01255478; iTF_01405622; iTF_01473847; iTF_00109752; iTF_00127384; iTF_00223800; iTF_00763160; iTF_00961752; iTF_00216313; iTF_00393529; iTF_01065497; iTF_01122361; iTF_01512761; iTF_00084474; iTF_00088730; iTF_00232538; iTF_00865242; iTF_01406426; iTF_00220507; iTF_01408123; iTF_01523291; iTF_00014652; iTF_00183868; iTF_00298236; iTF_00770300; iTF_01087132; iTF_01420860; iTF_01477500; iTF_00385245; iTF_00451869; iTF_00873725; iTF_00125854; iTF_00219038; iTF_00251998; iTF_00296702; iTF_00765502; iTF_00867326; iTF_01417630; iTF_00229279; iTF_00230623; iTF_00684095; iTF_01015743; iTF_01245151; iTF_00140512; iTF_00863200; iTF_00962432; iTF_01068224; iTF_00738273; iTF_01048161; iTF_00175683; iTF_01048835; iTF_01411436; iTF_00060141; iTF_00174957; iTF_00719344; iTF_01200080; iTF_00939478; iTF_01303287; iTF_01413112; iTF_01414104; iTF_00718492; iTF_00174109; iTF_00938622; iTF_01412254; iTF_00159039; iTF_01269729; iTF_01270436; iTF_01268965; iTF_01267494; iTF_01268203; iTF_01266814; iTF_01099121; iTF_01488511;
80% Identity: iTF_01228945;