Alab028897.1
Basic Information
- Insect
- Apis laboriosa
- Gene Symbol
- RCOR3_1
- Assembly
- GCA_014066325.1
- Location
- JACEOM010000036.1:2442205-2448704[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.4e-10 1.6e-06 29.1 0.0 3 46 128 171 126 171 0.97 2 3 2.2 4.7e+03 -1.2 0.3 37 44 239 246 234 247 0.87 3 3 4.5e-13 9.8e-10 39.4 0.0 3 46 337 380 336 380 0.98
Sequence Information
- Coding Sequence
- ATGGTTTTGGCGGAAAGAAATTCGGAAAATGTTAGAAATGGGCGCAGATCGAGAGGTCCCAGCCCCAACGGACAGACGGAATCTTCGAGCGAAGAAGACGGAGttcCAGCAGAAAAAATACGTGTTGGAAGAGATTATCAAGTCATTGTTCCAGAATTTGTTCCCGTCAGTGaacGACGATTAGATCAATGCCCTGACAGGGCATTATTAGTATGGTCTCCTACTACTGATATACCTGatcaaaaattggatgaatatattatattagcaaaagaaaaatatggttATAATGGAGAACAAGCATTAGGAATGTTATTTTGGCATAAACATAATTTAGAGCGTGCTGTATTAGATTTAGCTAATTTTACGCCATTTCCTGATGAATGGACAGTTGAAGATAAAGTTCTTTTTGAACAAGCATTTCAATTTCATGGGAAAAGCTTCCATCGAATTCGTCaaatgttaCCAGATAAATCTATTGCCAgtcttgttaaatattattatagctgGAAAAAAACGCGAACTAGAACATCATTAATGGATAGACAAGCTAGAAAATTAACAAGTGGTGGCAAGGAAGGAGAAAATGGTAGTGAAAATGGAAGTGAATTAGGTTCCAATACAGACAGTGAATCAGAAGAAAAAGGCTCGTGTAGCAACTGTGGCGTTGCTTGTCATAGTGTTCGTGCGACGCCAAAAGGACACGCGTGTCACAGCTGCTATCTGCACTGGAGgcGAACTGGTGTAGCAAGACCATTAAGTTCCATGCCAGGTCGaacaaacaaaagaaaacCACCTCGCGGTCTCGTTGTTAATCACGATGATTTAGCAGCATTGGCTGGTCAACCTAATCAAGCAAACAACAGTTTACAAGCCATTGACACCGAAATTGTTAGTCTAAAACGTCAAatacaatCAAATAAACAACAAGTAAGTGCACTGAAGCGTAAAACAACTGATGGTATTGATGATTTACGACCTCCAGAAGTATCAAGTCGTATAAATGCTCGTTGGACAAATGATGAATTACTTTTGGCCGTTCAAGGAGTtagaaaatatggaaaagatttttctgCGATTGCTGATGTAATTGGAACTAAGACAGAAGCTCATTTACGATCGTTTTTCGTGAATTATCGGCgaagatataatttagatgccgtattaaaagaatatgaagCTGAAAATGGCCCGATACTAATTGATgatgagaaagaagaaaagATGGATGTGGATCAGCCAAATGAAGCAGCAGAATCATCGCAAAAGACGAAATCATCCGCCAGTATTGGACAAACAGCTAAATAA
- Protein Sequence
- MVLAERNSENVRNGRRSRGPSPNGQTESSSEEDGVPAEKIRVGRDYQVIVPEFVPVSERRLDQCPDRALLVWSPTTDIPDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTRTSLMDRQARKLTSGGKEGENGSENGSELGSNTDSESEEKGSCSNCGVACHSVRATPKGHACHSCYLHWRRTGVARPLSSMPGRTNKRKPPRGLVVNHDDLAALAGQPNQANNSLQAIDTEIVSLKRQIQSNKQQVSALKRKTTDGIDDLRPPEVSSRINARWTNDELLLAVQGVRKYGKDFSAIADVIGTKTEAHLRSFFVNYRRRYNLDAVLKEYEAENGPILIDDEKEEKMDVDQPNEAAESSQKTKSSASIGQTAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228305;
- 90% Identity
- iTF_00224480;
- 80% Identity
- -