Tsti005542.1
Basic Information
- Insect
- Trachelus stipa
- Gene Symbol
- RCOR3
- Assembly
- GCA_036026315.1
- Location
- JAYRCB010000363.1:3896113-3900900[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-09 1.3e-06 29.0 0.0 3 46 128 171 126 171 0.97 2 3 4.8 5.1e+03 -1.8 0.7 37 44 276 283 272 284 0.87 3 3 7.4e-13 7.9e-10 39.2 0.0 3 46 374 417 373 417 0.98
Sequence Information
- Coding Sequence
- ATGGTTCTGGCGGAGAGGAATGCAGAAAATGTGAGAAATGGACGAAGATCAAGAGGTCCCAGCCCCAATGGACAGACGGAGTCCTCCAGCGAGGAAGACGGAGTTCCAGCTGAAAAAATTCGTGTTGGCCGTGATTATCAAGTTATTGTTCCGGAATTTGTTCCAGTTAATGAACGGCGCTTGGAACAATGCCCTGACCGGGCTTTACTCGTCTGGTCTCCAACAACAGATATCCCTGatcaaaaatTGGATGAGTATATTATattagcaaaagaaaaatatggttaCAATGGCGAACAGGCACTGGGGATGCTTTTCTGGCACAAACATAATTTGGAACGTGCTGTTCTGGACCTGGCAAATTTCACACCGTTTCCTGATGAATGGACGGTTGAAGATAAAGTTTTATTCGAACAAGCCTTTCAATTTCatggaaaaagttttcatcGGATTCGTCAAATGCTTCCAGACAAATCCATAGCTAGCTTAGTTAAATATTACTACAGTTGGAAAAAAACGCGAACCCGAACGTCATTAATGGACAGACAAGCCCGAAAACTAACAAGCGGCGGTAAGGAAGGAGAGAATGGAAGTGAAAATGGAAGTGAATTGGGTTCCAACACTGATAGCGAGTCCGAGGAAAAAAAATGGACGATCCACCGCGGAATACGCCGTGGAAAGAACCAAGCAGTGCCAGGAAGCCAAGGCGCAGACGCTAAGGCCTCGTCCGACTCGGAAAACGTCCCTCAGGTTCAGGGTTCATGTAGCAACTGCGGCGTTGCTTGTCATAGTGTTCGTGCGACGCCCAAGGGACACGCGTGTCATAGCTGCTATCTGCACTGGAGGCGCACTGGTGTTGCGAGGCCACTGAGTTCCATGCCGGGTCGTTCGAACAAAAGAAAACCTCCCCGTGGACTGGTTGTAAATCACGATGACTTGGCGGCATTGGCTGGCCAGCCGAACCAAGCGAGCAACAGCCTACAAGCTATTGACACCGAAATCGTTAGCCTCAAGCGACAAATCCAATCGAACAAACAGCAAGTGAGTGCACTGAAACGTAAAACTGTCGATGGAATTGATGATCTACGACCACCCGAGGTATCCAGTCGTATAAATGCACGATGGACCAACGACGAGTTACTCTTGGCTGTACAAGGTGTCCGAAAATATGGCAAAGACTTCTCCGCTATTGCTGATGTCATTGGTACAAAGACAGAGGCCCACCTACGATCGTTCTTTGTAAACTATCGGCGAAGATATAATTTGGATGCTGTGCTGAAAGAGTACGAGGCTGAGAATGGACCTATTCTTATCGACGatgagaaagaggaaaagatggAAGTTGATCAGACCTCAAGCAACGAGACAGCGGAAACATCACAGAAAGCGAAAGCTTCCGTTGGACCTGGCCAGACGGctaaataa
- Protein Sequence
- MVLAERNAENVRNGRRSRGPSPNGQTESSSEEDGVPAEKIRVGRDYQVIVPEFVPVNERRLEQCPDRALLVWSPTTDIPDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTRTSLMDRQARKLTSGGKEGENGSENGSELGSNTDSESEEKKWTIHRGIRRGKNQAVPGSQGADAKASSDSENVPQVQGSCSNCGVACHSVRATPKGHACHSCYLHWRRTGVARPLSSMPGRSNKRKPPRGLVVNHDDLAALAGQPNQASNSLQAIDTEIVSLKRQIQSNKQQVSALKRKTVDGIDDLRPPEVSSRINARWTNDELLLAVQGVRKYGKDFSAIADVIGTKTEAHLRSFFVNYRRRYNLDAVLKEYEAENGPILIDDEKEEKMEVDQTSSNETAETSQKAKASVGPGQTAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228305;
- 90% Identity
- iTF_01228305;
- 80% Identity
- iTF_01475377;