Basic Information

Gene Symbol
RCOR3_1
Assembly
GCA_030522685.1
Location
JAPYZA010000034.1:17269-23393[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.8e-09 1.4e-05 26.9 0.0 3 46 127 170 125 170 0.96
2 3 4.2 1.2e+04 -1.8 0.7 37 44 275 282 271 283 0.87
3 3 2.7e-13 7.5e-10 40.5 0.0 3 46 373 416 371 416 0.97

Sequence Information

Coding Sequence
ATGGTGCTCGCCGAGCGGAACTCGGAGAACGTGAGGAACGGGCGCAGGTCCAGGGGCCCCAGCCCGAATGGTCAGACGGAGTCCTCCAGCGAGGAGGATGGAGTTCCAGCAGAGAAGATTCGCGTTGGCAGGGATTACCAAGTTATTGTTCCAGAGCTAGTTCCTGTTAATGagCGAAAAATGGATCTGCCCGAAAAAGCATTACTTGTGTGGTCCCCAACAGGTGATATACCAGATCAAAAATtgGATGAGTATATTATTTTGGCTAAAGAAAAGTATGGCTACAATGGAGAACAAGCATTGGGTATGCTTTTCTGGCACAAACACAATCTAGAAAGAGCAATTCTTGATCTAGCGAATTTCACACCTTTCCCCGATGAGTGGACGGTAGAAGATAAAGTTCTATTCGAACAAGCCTTCCAGTTTCATGGAAAAAGTTTTCACAGGATTCGTCAAAtgcTTCCAGACAAACCCATTGCTAGCCTTGTCAAATACTACTACAGTTGGAAGAAAACTCGAACCAAAACATCTTTGATGGATAGGCAAGCAAGAAAACTCACAAGCGGTGGCAAAGAGGGAGAAAACGGAAGTGAAAATGGAAGTGAACTTGGTTCAAACACAGACAGCGAATCTGAAGAAAAAAAATGGACGATCCACCGCGGAATTCGTCGTGGAAAGAACCAGACCGTGCCAGGGAGCCAAGGCACTGACGCCAAGGCCTCATCCGACTCGGAAAACGTTCCTCAGGTTCAGGGCTCGTGTAGCAACTGCGGCGTTGCTTGTCATAGCGTTCGTGCAACGCCCAAGGGACACGCGTGTCATAGCTGCTATCTGCATTGGAGGCGCACGGGTGTCGCGCGGCCGCTGAGCTCAATGCCGGGTCGATCTAACAAGCGAAAGCCGCCTCGTGGACTGGTCGTCAATCACGACGACCTGGCGGCGCTGGCCGGCCATCCGAGCCAAGCTACCAGCACTCTCCAAGCTATTGACACTGAGATCGTTAGCCTGAAGCGACAAaTCCAGTCGAACAAGCAGCAGGTGAGCGCGCTGAAGCGGAAAACGACGGACGGAATCGACGAGCTGCGGCCCGCGGAAAACTCGAGCCGGATAAACTCGCGCTGGACAAACGACGAGCTGCTACTAGCCGTGCAGGGGGTGCGCAAGTACGGTAAGGACTTCTCGGCGATCGCCGACGTGTTGGGCACCAAGACGGAGGCGCACCTGCGCTCCTTCTTCGTCAACTACCGGCGGAGATATAACCTCGACGCCGTACTCAAGGAGTACGAGGCAGAGAACGGGCTCATCACAATCGAGGACGATAAAGACGAAAAGATGGAAGTGGATCAGCCGGCGAATGCAGAATCAGCAGAGAGCTCGCAGAAAACAAAAACACCGATTGCCGTGAATCAAGCAGCTAAATAA
Protein Sequence
MVLAERNSENVRNGRRSRGPSPNGQTESSSEEDGVPAEKIRVGRDYQVIVPELVPVNERKMDLPEKALLVWSPTGDIPDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAILDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKPIASLVKYYYSWKKTRTKTSLMDRQARKLTSGGKEGENGSENGSELGSNTDSESEEKKWTIHRGIRRGKNQTVPGSQGTDAKASSDSENVPQVQGSCSNCGVACHSVRATPKGHACHSCYLHWRRTGVARPLSSMPGRSNKRKPPRGLVVNHDDLAALAGHPSQATSTLQAIDTEIVSLKRQIQSNKQQVSALKRKTTDGIDELRPAENSSRINSRWTNDELLLAVQGVRKYGKDFSAIADVLGTKTEAHLRSFFVNYRRRYNLDAVLKEYEAENGLITIEDDKDEKMEVDQPANAESAESSQKTKTPIAVNQAAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01228305;
90% Identity
iTF_00714308;
80% Identity
iTF_00690110;