Cpyg005596.1
Basic Information
- Insect
- Calameuta pygmaea
- Gene Symbol
- RCOR3
- Assembly
- GCA_031762395.1
- Location
- JASANN010000266.1:3795060-3799905[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1e-09 8.9e-07 29.0 0.0 3 46 128 171 126 171 0.97 2 3 4 3.5e+03 -1.8 0.7 37 44 276 283 272 284 0.87 3 3 6.2e-13 5.5e-10 39.2 0.0 3 46 374 417 373 417 0.98
Sequence Information
- Coding Sequence
- ATGGTTCTGGCGGAGAGGAATGCAGAAAATGTGAGAAATGGACGAAGATCGAGAGGCCCCAGCCCCAATGGACAGACGGAGTCCTCCAGCGAGGAAGACGGAGTTCCAGCTGAAAAAATTCGTGTTGGTCGTGATTATCAAGTCATTGTTCCGGAATTTGTTCCAGTTAATGAACGGCGCTTGGATCAATGTCCTGACCGGGCTTTACTCGTCTGGTCTCCAACAACAGATATCCCCGatcaaaaatTGGATGAGTATATTATattagcaaaagaaaaatatggttACAATGGCGAACAGGCACTGGGGATGCTTTTCTGGCACAAACACAATTTGGAACGTGCTGTTTTGGACCTGGCAAATTTCACACCATTTCCTGATGAATGGACAGTCGAAGATAAAGTTTTATTCGAACAAGCCTTtcaatttcatggaaaaagttttcatcGGATTCGTCAAATGCTTCCAGACAAATCCATAGCTAGCTTAGTTAAATATTACTACAGTTGGAAAAAAACACGAACCAGAACGTCATTAATGGACAGACAAGCACGAAAACTAACGAGCGGCGGTAAGGAAGGAGAGAACGGAAGTGAAAATGGAAGTGAATTAGGTTCCAACACTGATAGCGAGTCCGAGGAAAAAAAATGGACGATCCACCGCGGAATACGCCGTGGAAAGAACCAAGCAGTGCCAGGAAGCCAAGGCGCAGACGCTAAGGCCTCGTCCGACTCGGAAAACGTCCCTCAGGTTCAGGGTTCATGTAGCAACTGCGGCGTTGCTTGTCATAGTGTTCGTGCGACGCCCAAGGGACACGCGTGTCATAGCTGCTATCTGCACTGGAGGCGCACGGGTGTTGCGAGGCCACTGAGTTCCATGCCGGGTCGTtcgaacaaaagaaaaccTCCCCGTGGACTGGTTGTTAATCACGATGACTTGGCGGCATTGGCTGGCCAGCCGAACCAAGCGAGCAACAGCCTGCAAGCTATTGACACCGAAATCGTTAGCCTCAAGCGACAAATCCAGTCGAACAAGCAACAAGTGAGCGCGTTGAAACGTAAAACTGTCGATGGGATCGATGATCTACGGCCGCCTGAAGTATCCAGTCGTATAAACGCACGATGGACCAACGACGAGTTACTCTTGGCTGTGCAAGGTGTTCGAAAATATGGGAAAGACTTTTCTGCGATTGCTGACGTCATTGGTACAAAGACAGAGGCCCATCTAAGATCGTTCTTTGTAAACTATCGGCGACGATATAATTTGGATGCTGTGCTCAAAGAGTACGAGGCTGAGAATGGACCTATTTTGATTGACGACGAGAAGGAGGAAAAGATGGAAGTTGATCAGACCTCAAGCAACGAGACAGCGGAAACGTCACAGAAAGCGAAAGCTTCCGTTGGTCCCGGGCAAACGGCtaaataa
- Protein Sequence
- MVLAERNAENVRNGRRSRGPSPNGQTESSSEEDGVPAEKIRVGRDYQVIVPEFVPVNERRLDQCPDRALLVWSPTTDIPDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTRTSLMDRQARKLTSGGKEGENGSENGSELGSNTDSESEEKKWTIHRGIRRGKNQAVPGSQGADAKASSDSENVPQVQGSCSNCGVACHSVRATPKGHACHSCYLHWRRTGVARPLSSMPGRSNKRKPPRGLVVNHDDLAALAGQPNQASNSLQAIDTEIVSLKRQIQSNKQQVSALKRKTVDGIDDLRPPEVSSRINARWTNDELLLAVQGVRKYGKDFSAIADVIGTKTEAHLRSFFVNYRRRYNLDAVLKEYEAENGPILIDDEKEEKMEVDQTSSNETAETSQKAKASVGPGQTAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228305;
- 90% Identity
- iTF_01228305;
- 80% Identity
- iTF_00294401; iTF_00295939; iTF_00295173; iTF_00291463; iTF_00297479; iTF_00252744; iTF_00254250; iTF_00293647; iTF_01473107; iTF_00298236; iTF_00251998; iTF_00296702;