Vger000840.1
Basic Information
- Insect
- Vespula germanica
- Gene Symbol
- RCOR3
- Assembly
- GCA_905340365.1
- Location
- HG996528.1:11835383-11839642[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-09 7e-07 29.0 0.0 3 46 128 171 126 171 0.97 2 3 3.1 2e+03 -1.3 0.3 37 44 276 283 271 284 0.87 3 3 6.5e-13 4.3e-10 39.2 0.0 3 46 374 417 373 417 0.98
Sequence Information
- Coding Sequence
- ATGGTTTTAGCAGAACGCAACTCAGAAAATGTTAGAAATGGTCGAAGATCAAGAGGTCCCAGCCCTAATGGACAGACGGAATCTTCAAGCGAAGAAGACGGAgttcCAGCCGAAAAGATACGTGTTGGCCGAGACTTTCAAGTTATAGTACCAGAATTTGTTCCTATCAACGAACGCAGACTGGATCAATGCCCTGATAGAGCTTTGCTGGTTTGGTCTCCTACTACTGATATACCAGATCAGAAattggatgaatatataatattagcaaaagaaaaatatgggtATAATGGTGAGCAGGCTTTGGGAATGTTATTTTGGCATAAACATAACTTAGAACGTGCAGTATTAGATTTAGCAAATTTTACACCATTTCCTGATGAGTGGACTGTTGAAGATAAGGTGTTATTTGAACAAGCATTTCAATTTCATGGGAAGAGTTTTCACCGTATTCGACAAATGtTGCCTGATAAGTCAATTGCCAgtcttgtaaaatattattatagttggAAAAAGACAAGAACTAGGACATCATTGATGGATAGACAGGCAAGAAAATTAACAAGCGGTGGGAAAGAAGGGGAAAATGGCAGCGAGAATGGAAGTGAGTTAGGCTCAAATACAGACAGCGAATctgaagaaaaaAAATGGACGATCCACCGCGGAATACGTCGTGGAAAGAACCAAGCTGTGCCAGGAAGCCAAAGCACTGACGCTAAGGCCCCATCCGACTCGGAAAACGCCCCTCAGGTTCAGGGCTCGTGTAGCAACTGTGGCGTCGCTTGCAATAGTGTACGTGCGACTCCCAAGGGACACGCGTGTCATAGCTGCTATCTGCACTGGAGGCGCACTGGTGTAGCAAGACCTCTAAGTTCTATGCCAGGTCgtacaaacaaaagaaaaccTCCTCGCGGATTGGTTGTAAATCATGATGACTTGGCAGCATTGGCTGGTCAACCAAATCAAGCTAACAATAGCTTACAAGCTATCGACACAGAGATTGTTAGCCTAAAACGTCAAaTACAGTCAAACAAGCAACAAGTAAGTGCTTTAAAACGTAAGACAACTGATGGGATAGATGATTTACGACCACCAGAAGTATCCAATCGTATAAATGCACGATGGACGAATGATGAACTACTGTTAGCTGTTCAAGGAGTTAGAAAATATGGCAAAGATTTCTCTGCAATCGCTGATGTAATTGGTACTAAAACAGAAGCACATTTACGGTCATTCTTCGTAAATTATCGACGAAGGTACAATCTAGATGCCGTTCTAAAAGAATATGAAGCTGAGAATGGTCCGATACTAATAGATgatgataaagaagaaaagatGGATGTCGACCAACCAAATGAAGTGGCAGAGTCGTCACAAAAAGCAAAAGCATCAAGTGGTTTAGGACAAACTGCAAAATAA
- Protein Sequence
- MVLAERNSENVRNGRRSRGPSPNGQTESSSEEDGVPAEKIRVGRDFQVIVPEFVPINERRLDQCPDRALLVWSPTTDIPDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTRTSLMDRQARKLTSGGKEGENGSENGSELGSNTDSESEEKKWTIHRGIRRGKNQAVPGSQSTDAKAPSDSENAPQVQGSCSNCGVACNSVRATPKGHACHSCYLHWRRTGVARPLSSMPGRTNKRKPPRGLVVNHDDLAALAGQPNQANNSLQAIDTEIVSLKRQIQSNKQQVSALKRKTTDGIDDLRPPEVSNRINARWTNDELLLAVQGVRKYGKDFSAIADVIGTKTEAHLRSFFVNYRRRYNLDAVLKEYEAENGPILIDDDKEEKMDVDQPNEVAESSQKAKASSGLGQTAK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228305;
- 90% Identity
- iTF_00279895;
- 80% Identity
- iTF_01514084;