Basic Information

Gene Symbol
RCOR3_1
Assembly
GCA_900480045.1
Location
UXGC01000197.1:18292-23692[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.7e-10 1.4e-06 29.0 0.0 3 46 127 170 125 170 0.97
2 3 3.1 5.2e+03 -1.6 0.6 37 44 275 282 272 283 0.87
3 3 5.6e-13 9.3e-10 39.2 0.0 3 46 373 416 371 416 0.97

Sequence Information

Coding Sequence
ATGGTGCTGGCCGAGAGGAATTCCGAGAGCGTGAGGAACGGCCGCAGGTCGAGGGGACCCAGCCCCAACCAGACCGAGTCCTCCAGCGAGGAAGACGGAGTTCCCGCGGAGAAGATCCGCGTCGGCAGGGACTACCAGGTTATTGTACCCGAGCTTGTTCCCGTCAACGatcgCAAAATAGAGTCTTGTCCTGAGAAGGCATTGCTGGTTTGGTCTCCAACAAATGAAATTCCGGAtcataaattggATGAATACATTATCCTGGCTAAGGAAAAGTATGGTTATAATGGAGAACAAGCATTGGGAATGCTATTTTGGCATAAACACAATCTAGAACGAGCCGTTCTCGATCTAGCAAATTTCACACCGTTCCCTGATGAATGGACAGTGGAGGATAAAGTTTTGTTCGAACAagcttttcaatttcatggcAAAAGCTTTCACAGAATTCGTCAGATGCTTCCAGATAAATCCATCGCCAGCCTTGTGAAATACTACTACAGTTGGAAAAAGTCCCGAACTAAAACATCGTTAATGGATAGACAAGCCAGAAAACTTACCAGTGGAGGCAAAGATGGTGAGAATGGAAGCGAAAATGGAAGCGAGCTGGGTTCAAATACAGACAGTGAAACTGAAGAAAAgAAATGGACGATCCACCGCGGAATTCGTCGTGGCAAGAACCAGTCCATGCCAGGAAGCCAAGGCACCGAAGCCAAGGCCTCATCCGACTCCGAAATTGTTCCTCAGGTTCAGGGCTCGTGTAGCAACTGTGGCGTTGCTTGTCATAGCGTCCGTGCTACGCCCAGAGGACACGCGTGTCATAGCTGCTATCTGCATTGGAGGCGCACGGGTGTCGCAAGACCGCTAAGCTCGATGCCGGGTCGTTCGAACAAGCGAAAACCGCCCCGTGGACTAGTCGTTAACCACGACGACCTGGCGGTGCTGGCCGGTCAGCCGAATCAAGCCAACAACGCCCTCCAAGCTATTGACACTGAAATCGTTAGCCTCAAGCGACAAATCCAATCGAACAAGCAGCAAGTGAGCGCGCTGAAGCGCAAGACAGCGGACGGCATCGACGAGCTGCGGCCGGCGGAGAACCCCAGCCGGATAAATTCCCGCTGGACGAGCGACGAGCTACTACTGGCAGTACAGGGGGTGCGCAAGTACGGCAAGGACTTCGCGGCGATTGCCGAAGTCATTGGCACCAAAACCGAGGCACACCTTCGCTCATTTTTCGTCAATTACCGCCGGAGATACAATCTTGATGCCGTGCTCAAGGAATACGAAGCCGAGAACGGACCCATACTCATAGAGGACGATAAGGATGAGAAGATGGAAGTCGATCCACCTGCAAATACAGAATCAGCGGAAACCTCACAAAAGACAAAAGTATCAGTAGGTGTAGCTCAAGCTGCAAAATAA
Protein Sequence
MVLAERNSESVRNGRRSRGPSPNQTESSSEEDGVPAEKIRVGRDYQVIVPELVPVNDRKIESCPEKALLVWSPTNEIPDHKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKSRTKTSLMDRQARKLTSGGKDGENGSENGSELGSNTDSETEEKKWTIHRGIRRGKNQSMPGSQGTEAKASSDSEIVPQVQGSCSNCGVACHSVRATPRGHACHSCYLHWRRTGVARPLSSMPGRSNKRKPPRGLVVNHDDLAVLAGQPNQANNALQAIDTEIVSLKRQIQSNKQQVSALKRKTADGIDELRPAENPSRINSRWTSDELLLAVQGVRKYGKDFAAIAEVIGTKTEAHLRSFFVNYRRRYNLDAVLKEYEAENGPILIEDDKDEKMEVDPPANTESAETSQKTKVSVGVAQAAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01228305;
90% Identity
iTF_00714308;
80% Identity
-