Cnig067752.1
Basic Information
- Insect
- Cataglyphis niger
- Gene Symbol
- RCOR3
- Assembly
- GCA_004329405.1
- Location
- SJPC01002068.1:8625-14478[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8e-09 1.5e-05 26.9 0.0 3 45 128 170 126 171 0.95 2 3 2.5 1.3e+04 -1.8 0.7 37 44 276 283 272 284 0.87 3 3 1.1e-12 5.7e-09 37.8 0.0 3 46 374 417 373 417 0.98
Sequence Information
- Coding Sequence
- ATGGTCTTGGCAGAGAGAAACTCGGAAAATGTACGCAATGGTCGCAGATCGCGAGGCCCCAGCCCTAACGCACAGACGGAATCTTCCAGCGAAGAGGATGGAGTTCCGGCAGAGAAAATAAGAGTTGGACGAGATTACCAAGTGATTGTTCCTGAACTTGTTCCTGTTAatgaacgTAGATTGGATCAATGTCCTGATAGAGCATTATTAGTTTGGTCACCAACCACAGATATACCAGATCAGAAACTTGatgaatacattatattagctaaagaaaaatatggttATAATGGAGAACAGGCATTGGGAATGCTATTTTGGCACAAACATAATTTGGAACGCGCAGTCTTGGATCTAGCAAATTTTACACCATTTCCTGATGAATGGACGGTTGAagataaagtattatttgaGCAAGCATTTCAATTTCATGGCAAGAGTTTTCATCGCATTCGGCAAAtgctCCCTGACAAATCTATTGCAAGTCTCGTCAAATACTATTATGGCTGGAAAAAAACACGAAGTAGGACATCATTAATGGACAGGCAAGCACGAAAATTGACGAGCGGCTGTAAGGAAGGCGAGAATGGCAGCGAAAACGGAAGCGAGCTTGGCTCCAATACAGATAGCGAGTCTGAAGAAAAAAAATGGACGATCCACCGCGGAATACGTCGTGGAAAGAACCAAGCTGTGCCAGGAAGCCAAGGCACTGATGCTAAGGCCCCATCCGACTCGGAAAACGCCCCTCAGGTTCAGGGCTCGTGTAGCAACTGTGGCGTTGCATGCCATAGTGTTCGTGCGACGCCCAAAGGACACGCGTGTCATAGCTGCTATCTACATTGGAGGCGCACCGGTGTAGCGAGACCGTTAACTTCCATGCCGGGTCGTACGAATAAAAGAAAGCCACCTCGGGGCTTGGTTGTGAATCACGATGATTTGGCGGCTTTGGCTGGTCAACCAAACCAGGCCAACAACAGTTTGCAAGCGATCGACACTGAGATCGTTAGCCTAAAGCGTCAAATACAAGCCAACAAACAACAAGTAAGCGCACTGAAACGAAAGACTGCCGATGGTATTGACCATCTACGACCACCGGAAGTATCGAGCCGTATAAATGCTCGTTGGACAAACGATGAATTGTTATTGGCTGTTCAAGGTATCAGAAAATATGGAAAAGATTTCGCCGCGATCGCTGAAGTTATCGGAACCAAAACTGAGGCACACTTAcgatcattttttgttaattatcgACGGAGATATAATTTGGACGCGGTTCTAAAAGAATTCGAGGCTGAAAACGGTCCTATAGTGAtcgaagatgaaaaagaagagaagATGGATGTTGACCAATCAAACGATACCGCAGAGTCATCTCAGAAGGGAAAAACTTCCACTGGGCCTGCACAAGCTACTAAATaa
- Protein Sequence
- MVLAERNSENVRNGRRSRGPSPNAQTESSSEEDGVPAEKIRVGRDYQVIVPELVPVNERRLDQCPDRALLVWSPTTDIPDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYGWKKTRSRTSLMDRQARKLTSGCKEGENGSENGSELGSNTDSESEEKKWTIHRGIRRGKNQAVPGSQGTDAKAPSDSENAPQVQGSCSNCGVACHSVRATPKGHACHSCYLHWRRTGVARPLTSMPGRTNKRKPPRGLVVNHDDLAALAGQPNQANNSLQAIDTEIVSLKRQIQANKQQVSALKRKTADGIDHLRPPEVSSRINARWTNDELLLAVQGIRKYGKDFAAIAEVIGTKTEAHLRSFFVNYRRRYNLDAVLKEFEAENGPIVIEDEKEEKMDVDQSNDTAESSQKGKTSTGPAQATK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228305;
- 90% Identity
- iTF_01228305;
- 80% Identity
- -