Bpas018173.1
Basic Information
- Insect
- Bombus pascuorum
- Gene Symbol
- RCOR3
- Assembly
- GCA_905332965.1
- Location
- HG995274.1:11078189-11084015[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.8e-10 9.8e-07 29.1 0.0 3 46 128 171 126 171 0.97 2 3 2.3 2.9e+03 -1.2 0.3 37 44 239 246 234 247 0.87 3 3 4.8e-13 6e-10 39.4 0.0 3 46 337 380 336 380 0.98
Sequence Information
- Coding Sequence
- ATGGTTCTGGCGGAGAGAAACTCAGAAAATGTTAGAAATGGGCGCAGGTCGAGGGGCCCCAGCCCTAATGGACAGACGGAATCCTCGAGCGAGGAAGACGGAGTTCCAGCAGAGAAAATCCGTGTTGGAAGGGATTATCAAGTTATTGTTCCAGAATTTGTTCCAGTCAGTGAACGACGATTAGATCAGTGTCCTGATAGAGCATTATTGGTATGGTCTCCTACTACTGATATACCTGATCAAAAATTGGATGAATATATCATATTAGCAAAGGAAAAGTATGGCTATAATGGAGAACAAGCATTAGGGATGTTATTTTGGCACAAACATAATTTAGAGCGTGCTGTACTAGATTTAGCTAATTTTACACCATTCCCTGATGAATGGACAGTAGAGGACAAAGTTCTTTTTGAACAAGCATTTCAGTTTCATGGGAAAAGCTTCCATCGAATTCGCCAAATGTTACCAGATAAATCTATTGCCAGCCTTGTTAAATATTATTATAGCTGGAAAAAGACACGGACTAGAACATCACTAATGGATAGACAAGCTAGGAAACTAACGAGTGGTGGGAAAGAAGGAGAAAATGGTAGTGAAAATGGGAGTGAATTAGGTTCCAATACAGACAGTGAATCAGAAGAAAAAGGCTCGTGTAGCAACTGTGGCGTTGCTTGTCATAGTGTTCGTGCGACGCCGAAAGGACATGCGTGTCACAGCTGCTATCTGCACTGGAGGCGAACTGGTGTAGCAAGACCATTAAGTTCCATGCCAGGTCGAACAAATAAAAGAAAACCACCTCGCGGTCTCGTTGTTAATCACGATGATTTAGCAGCATTGGCTGGTCAACCCAATCAAGCAAACAACAGCTTACAAGCGATTGACACCGAAATTGTTAGCCTAAAACGCCAAATACAATCAAACAAACAGCAAGTAAGCGCATTGAAACGTAAAACAACTGATGGTATTGATGATTTACGACCACCGGAAGTATCCAGTCGTATAAATGCTCGTTGGACAAATGACGAATTGCTCTTGGCCGTTCAAGGTGTCCGGAAATATGGAAAAGATTTTTCTGCGATTGCTGATGTAATTGGAACTAAAACAGAAGCTCATTTGCGATCATTCTTTGTAAATTATCGACGAAGGTATAATTTAGATGCTGTCTTGAAAGAATATGAAGCTGAAAACGGTCCGATATTAATTGATGATGAAAAGGAAGAAAAGATGGATGTGGATCAGCCTAATGAAACAGCAGAGTCATCTCAAAAGACGAAATCATCTGTAGGTCTTGGACAAACTGCTAAATAA
- Protein Sequence
- MVLAERNSENVRNGRRSRGPSPNGQTESSSEEDGVPAEKIRVGRDYQVIVPEFVPVSERRLDQCPDRALLVWSPTTDIPDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTRTSLMDRQARKLTSGGKEGENGSENGSELGSNTDSESEEKGSCSNCGVACHSVRATPKGHACHSCYLHWRRTGVARPLSSMPGRTNKRKPPRGLVVNHDDLAALAGQPNQANNSLQAIDTEIVSLKRQIQSNKQQVSALKRKTTDGIDDLRPPEVSSRINARWTNDELLLAVQGVRKYGKDFSAIADVIGTKTEAHLRSFFVNYRRRYNLDAVLKEYEAENGPILIDDEKEEKMDVDQPNETAESSQKTKSSVGLGQTAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228305;
- 90% Identity
- iTF_00226521; iTF_00881954; iTF_00200684; iTF_00882893; iTF_00879566; iTF_00881173; iTF_00880382; iTF_00707786; iTF_00707785; iTF_00692852; iTF_00708472; iTF_00141758; iTF_01002014; iTF_00713600;
- 80% Identity
- iTF_00226521;