Gnig007668.1
Basic Information
- Insect
- Galeopsomyia nigrocyanea
- Gene Symbol
- RCOR3
- Assembly
- GCA_035047105.1
- Location
- JAWWMK010000040.1:9137249-9142114[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.9e-10 8e-07 30.2 0.0 3 46 127 170 125 170 0.97 2 3 4.8 7.9e+03 -1.8 0.7 37 44 272 279 268 280 0.87 3 3 5.5e-13 9.1e-10 39.7 0.0 3 46 370 413 368 413 0.97
Sequence Information
- Coding Sequence
- ATGGTGCTCGCCGAGAGGAACGCCGAGAACTTGAGGAATGGGCGCAGGTCCCAGGGGCCCAGTCCCAATGGACAAACCGACTCCTCCGACGAGGATGAGGTGCCAGCGGAAAAAATTCGTGTTGGCAGAGATTATCAGGTTATTGTTCCTGAGCTGGTTCCTGTTAATGATCGTAAGCTGGACTCGTGTCCTGAGAAAGCTTTGCTTGTCTGGTCACcgacaaatgaaatttcagatcaaaaatTGGACGAGTACATCATACTGGCTAAGGAAAAATATGGCTACAACGGAGAGCAAGCATTGGGAATGTTGTTCTGGCACAAACACAATTTGGACAGAGCTGTCCTTGATCTTGCAAATTTCACACCTTTCCCCGATGAGTGGACAGTCGAAGACAAAGTTCTTTTTGAACAAGCTTTTCAGTTTCatggaaaaagttttcacAGAATACGGCAAATGCTTCCAGACAAAACTATTGCTAGTCTTGTCAAATACTACTACAGTTGGAAGAAATCCCGCTCTAAAACATCACTTATGGACAGGCAAGCAAGGAAGCTTACAAGTGGTAAAGAAGGAGAAAATGGAAGTGAGAACGGAAGTGAACTAGCTTCAAACTCAGACAGCGAATCTGAGGAAAAAAAATGGACGATCCACCGCGGAATTCGTCGTGGAAAGAACCAGGGCTCGACGCCAGGCGACGACGCCAAGGCCTCGTCCGACTCGGAAAACTTTCCTCAGGTTCAGGGCTCGTGTAGCAACTGCGGCGTTGCTTGTCATAGCGTGCGTGCTACGCCGAAGGGACACGCGTGTCATAGCTGCTATCTGCATTGGAGGCGCACGGGGGTAGCCCGACCGCTGAGCTCGATGCCGGGGCGCTCGAACAAGCGCAAGCCTCCACGCGGACTGGTCGTCAATCACGACGACCTGGCCGCATTGGCGGGACAGCCCGGCCCGGCCAACCAGATCCTGCAAGCTATTGACACTGAAATCGTTAGTCTCAAGCGACAAATCCAAACGAACAAGCAGCAAGTGAGCGCGCTCAAGCGCAAGACAAACGACGGCATCGACGATCTGCGACCGGGCGAGAACGTCAATCGGATAAATTCGCGCTGGACCAACGACGAGCTGATGTTGGCGGTGCAAGGTGTGCGCAAATACGGCAAAGACTTCTCGGCTATCGCCGAGGTGATCGGCACCAAGACCGAGGCTCACCTGCGTTCTTTCTTCATCAATTACCGGCGGAGGTACAATCTCGACATCGTGCTCAAAGAGTACGAGGCGGAGCACGGCCCGATACTCATGGACGACGACAAGGATGACAAGATGGAGGTTGACCTGCCAGCAAACGCCGACGCTGCTGAAGCTTCACAGAAGACAGCGAAACCCACAGCCACAAGTATAAATCAAACGTCGGCCAAATAA
- Protein Sequence
- MVLAERNAENLRNGRRSQGPSPNGQTDSSDEDEVPAEKIRVGRDYQVIVPELVPVNDRKLDSCPEKALLVWSPTNEISDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLDRAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKTIASLVKYYYSWKKSRSKTSLMDRQARKLTSGKEGENGSENGSELASNSDSESEEKKWTIHRGIRRGKNQGSTPGDDAKASSDSENFPQVQGSCSNCGVACHSVRATPKGHACHSCYLHWRRTGVARPLSSMPGRSNKRKPPRGLVVNHDDLAALAGQPGPANQILQAIDTEIVSLKRQIQTNKQQVSALKRKTNDGIDDLRPGENVNRINSRWTNDELMLAVQGVRKYGKDFSAIAEVIGTKTEAHLRSFFINYRRRYNLDIVLKEYEAEHGPILMDDDKDDKMEVDLPANADAAEASQKTAKPTATSINQTSAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228305;
- 90% Identity
- -
- 80% Identity
- -