Tjap005382.1
Basic Information
- Insect
- Trissolcus japonicus
- Gene Symbol
- RCOR3
- Assembly
- GCA_030522925.1
- Location
- JAPYZS010000182.1:14567-19916[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.9e-10 5.4e-07 30.2 0.0 3 46 128 171 126 171 0.97 2 3 2.5 2.8e+03 -0.9 0.3 36 44 275 283 266 284 0.81 3 3 1.1e-12 1.2e-09 38.8 0.0 3 46 374 417 373 417 0.98
Sequence Information
- Coding Sequence
- atgGTGCTTGCCGAGAGGAACGCCGAAAATGTTCGGAACGGACGCAGATCCCAGGGTCCCAGTCCAAACGGCCAAACGGAATCATCATCCGAAGAAGATGGAGTTCCAGCTGAAAAAATTCGAGTTGGAAGAGATTACCAAGTTATAGTTCCAGAATTTATCCCTCCACATGAACGTCGACTAGAACAATGTCCAGACAGAGCGTTGCTGGTATGGTCACCGACAACTGACATCCCCGACCAAAAGTTGGACGAGTACACAATATTAGCTAAGGAAAAATATGGTTACAATGGTGAGCAGGCCTTGGGGATGCTCTTCTGGCACAAACACAATTTGGAGAGGGCGATCTTGGATTTGGCCAATTTTACTCCATATCCCGACGAGTGGACCGTGGAAGATAAAGTTCTCTTTGAACAAGCCTTTCAGTTCCACGGAAAATCGTTCCATCGAATTCGTCAAATGCTCCCTGACAAAACAATTGCGAGCCTTGTAAAATATTACTACAGCTGGAAGAAGACAAGGTCGCGCAGCTCACTGATGGACAGACAAGCGAAAAAGTTGTCCAGCGGTGGCAAGGAAGGCGAAAACGGTAGCGAAAACGGGAGCGAGCTTGGTTCCAACACGGACAGCGAAAACGAGGAAAAAAAATGGACGATCCACCGCGGAATCCGTCGCGGCAAGAGCCAAGCTGCTCCAGGAGGCCAGGGTACCGAGGCTAAGCCCTCGTCCGACTCGGAAAACATTCCTCAGGTTCAGGGGTCGTGTAGCAACTGCGGCGTTGCTTGTCAAAGCGTACGTCATACACCCAAAGGACACGCGTGTCATAGCTGCTATCTGCACTGGAGGCGTACCGGGGTTGTGCGGCCATTAAGTTCCATGCCGGGTCGAACGAACAAACGAAAGCCACCGCGTGGACTGGTCGTAAACCACGATGACTTAGCGGCTCTGGCCGGTCAGCCCTACCAAGCTAACAACACTCTGCAAGCCATTGAAACTGAAATAGTTAGCCTGAAACGACAAATCCAATCGAACAAGCAACAAGTGAGCgcgttgaaaagaaaaacaaccgACGGAATCGACGATCTGCGGCCGGCCGAGGTGTCCAACCGCATCAACGCCCGCTGGACGAACGACGAGCTCCTGCTGGCGGTCCAGGGCGTTCGCAAATACGGCAAGGATTTTGCCGCGATCGCGGACGTCATTGGGACCAAAACAGAGGCTCACCTCCGGTCGTTCTTCATCAATTACAGACGGAGATACAACCTTGACGCGGTCCTCAAAGAATACGAAAGTGAAAATGGGcctattttaattgaagatgAAAAGGAAGAGAAGatggaCGTTGAGCAAACGATAAACAACGACAGCGCCGAGACGTCGCAAAAGACAACAAAAACTTCGACATCAACGAACCAATCTTccaaataa
- Protein Sequence
- MVLAERNAENVRNGRRSQGPSPNGQTESSSEEDGVPAEKIRVGRDYQVIVPEFIPPHERRLEQCPDRALLVWSPTTDIPDQKLDEYTILAKEKYGYNGEQALGMLFWHKHNLERAILDLANFTPYPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKTIASLVKYYYSWKKTRSRSSLMDRQAKKLSSGGKEGENGSENGSELGSNTDSENEEKKWTIHRGIRRGKSQAAPGGQGTEAKPSSDSENIPQVQGSCSNCGVACQSVRHTPKGHACHSCYLHWRRTGVVRPLSSMPGRTNKRKPPRGLVVNHDDLAALAGQPYQANNTLQAIETEIVSLKRQIQSNKQQVSALKRKTTDGIDDLRPAEVSNRINARWTNDELLLAVQGVRKYGKDFAAIADVIGTKTEAHLRSFFINYRRRYNLDAVLKEYESENGPILIEDEKEEKMDVEQTINNDSAETSQKTTKTSTSTNQSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228305;
- 90% Identity
- iTF_01492812;
- 80% Identity
- -