Pfla020621.1
Basic Information
- Insect
- Pseudomyrmex flavicornis
- Gene Symbol
- RCOR3
- Assembly
- GCA_014825475.1
- Location
- QVNW01000379.1:6102-10457[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.4 5e+03 -1.9 0.0 27 41 51 67 43 69 0.78 2 4 7.7e-10 1.1e-06 29.0 0.0 3 46 128 171 126 171 0.97 3 4 3.1 4.5e+03 -1.8 0.7 37 44 274 281 270 282 0.87 4 4 1.3e-12 2e-09 37.8 0.0 3 46 372 415 371 415 0.98
Sequence Information
- Coding Sequence
- ATGGTTCTCGCAGAGAGGAATTCCGAAAATGTTCGGAACGGCCGTAGATCGCGAGGTCCCAGCCCTAATGCACAGACGGAATCCTCCAGCGAAGAAGACGGAGTTCCAGCTGAAAAAATCAGAGTTGGAAGAGATTATCAAGTTGTTGTTCCAGAATTTATTCCTGTTAATGAACGTCGAGCAGAACAATGTATTGATAAGGCATTGTTGGTTTGGTCACCTACCACAGAAATACCTGATCAAAAATTGGATGAATATATTATATTGGCTAAAGAGAAATATGGCTACAATGGAGAACAAGCCTTGGGAATGTTATTTTGGCACAAACATAATTTGGAACGTGCAGTCTTGGATTTGGCAAATTTTACACCATTTCCCGATGAGTGGACAGTTGAAGACAAGGTGTTATTCGAGCAAGCATTCCAATTTCATGGCAAGAGTTTTCATCGAATCCGGCAAATGCTCCCTGACAAATCCATTGCCAGCCTTGTGAAATACTACTATAGCTGGAAGAAAACACGAACTAGGACATCATTGATGGACAGACAAGCTCGTAAATTAACTGGCAAAGAAGGCGAGAATGGGAGTGAAAACGGGAGTGAGCTTGGTTCCAATACAGATAGCGAGTCTGAGGAAAAAAAATGGACGGTCCATCGCGGAATACGTCGTGGAAAGAACCAAGCTGTGCCAGGAAGCCACGGCACTGACGCTAAGGCCCCGTCCGACTCGGAAAACGCCCCTCAGGTTCAGGGCTCATGTAGCAACTGTGGCGTTGCATGCCATAGTGTTCGTGCGACGCCTAAAGGACATGCGTGTCATAGCTGCTATCTACATTGGAGGCGTACCGGTGTAGCAAGACCCTTAACTTCTATGCCGGGTCGTACGAATAAGAGAAAGCCACCCCGAGGTTTGGTTGTGAATCACGATGATTTGGCGGCCTTAGCTGGTCAACCTAACCAGGCCAACAACAGCTTGGCAGCGCTTGAGACTGAAATCGTTAGCCTAAAACGTCAAATACAAAGTAACAAACAACAAGTAAGTGCGCTAAAGAGAAAAACAAGTGATGGTATCGATCATTTACGACCACCGGAAGTATCGAGTCGTATAAATGCTCGTTGGACAAACGACGAGCTGTTGTTGGCTGTTCAGGGCATTAGAAAATACGGAAAGGATTTTGCTGCGATTGCTGAAGTTATTGGTACCAAAACTGAGGCCCACTTACGATCGTTCTTCGTCAATTATCGACGGAGATACAACTTGGATGCTGTTCTAAAGGAATACGAAGCTGAAAACGGTCCCATATTGATCGATGATGAAAAGGACGAGAAGATGGATGTTGATCAGCCAAGTGACACGGCAGAATCATCACAAAAAGGTAAAATCTCTACTGGACCTGGACAAGTTGCTAAATAA
- Protein Sequence
- MVLAERNSENVRNGRRSRGPSPNAQTESSSEEDGVPAEKIRVGRDYQVVVPEFIPVNERRAEQCIDKALLVWSPTTEIPDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTRTSLMDRQARKLTGKEGENGSENGSELGSNTDSESEEKKWTVHRGIRRGKNQAVPGSHGTDAKAPSDSENAPQVQGSCSNCGVACHSVRATPKGHACHSCYLHWRRTGVARPLTSMPGRTNKRKPPRGLVVNHDDLAALAGQPNQANNSLAALETEIVSLKRQIQSNKQQVSALKRKTSDGIDHLRPPEVSSRINARWTNDELLLAVQGIRKYGKDFAAIAEVIGTKTEAHLRSFFVNYRRRYNLDAVLKEYEAENGPILIDDEKDEKMDVDQPSDTAESSQKGKISTGPGQVAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228305;
- 90% Identity
- iTF_01228305;
- 80% Identity
- -