Csol004904.1
Basic Information
- Insect
- Ceratosolen solmsi
- Gene Symbol
- RCOR3
- Assembly
- GCA_000503995.1
- Location
- NW:8894285-8902266[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.8e-10 4.5e-07 29.0 0.0 3 46 128 171 126 171 0.97 2 3 3.1 1.8e+03 -1.8 0.7 37 44 277 284 273 285 0.87 3 3 3.2e-13 1.8e-10 39.8 0.0 3 46 375 418 373 418 0.97
Sequence Information
- Coding Sequence
- ATGGTTCTTGCCGAAAGAAACTCGGAAAGCGTAAGAAACGGCCGAAGGTCCAGGGGCCCCAGCCCCAACGGTCAATCTGAGTCTTCAAGTGAAGAAGACGGAGTACCAGCTGAGAAGATACGTGTTGGCAGAGATTATCAAGTTATTGTGCCTGAATTGATACCTATAAAtgaacgTAAGTTGGACTTGTGTCCTGAAAAAGCATTACTTGTATGGTCGCCAACCAGTGATATACcagataaaaaattggATGAGTACATTATCTTagcgaaagaaaaatatggttATAACGGGGAACAAGCATTAGGAATGTTATTTTGGCATAAANNNNNNNNNNNNNNAGCGGTTCTTGATCTTGCAAATTTTACACCGTTTCCTGATGAATGGACAGTGGAAGATAAAGTTTTGTTTGAACAAGCTTTTCAATTTCATGGAAAAAGTTTTCACCGAATTCGTCAgatgctTCCAGATAAATCTATTGCTAGTCTTGTCAAATATTACTATAGTTGGAAAAAAACTAGAACCAAAACATCATTAATGGATAGACAAGCAAGAAAATTGACTAGTGGTGGAAAAGAAGGAGAAAATGGAAGTGAAAATGGAAGTGAATTGGGTTCTAATACAGACAGTGAATCTGAAGAAAAAAAATGGACAATCCACCGCGGAATTCGTCGTGGAAAGAACAACCAAACCATGGCAGGGAGCCAAGGCACTGACGCTAAGGCCTCATCCGACTCGGAAAATGTTCCTCAGGTTCAGGGGTCATGTAGCAACTGCGGCATTGCTTGTCATAGCGTTCGTTCTACGCCAAAGGGACACGCGTGTCATAGCTGTTATCTGCATTGGAGGCGCACGGGTGTTGCAAGACCGCTGAGTTCAATGCCGGGTcgttcaaacaaaagaaagccACCGCGTGGACTAGTCGTTAATCACGACGATTTGGCAGCGCTAGCCGGTCAACCTAACCAAGCTGTCAACACTCTCCAAGCTGTTGACACTGAAATAGTTAGTCTCAAACGACaaATTCAATCGAATAAGCAACAAGTCAGTGCACTTAAACGCAAAACATCGGATGGAATCGATGAGTTACGACCACCTGAGAATTCTAGTCGGATAAATTCACGCTGGACAAATGATGAGTTGCTACTCGCAGTACAGGGGGTTCGCAAATATGGTAAAGACTTCTCGGCCATTGCTGATGTAATAGGCACAAAAACGGAAGCGCATCTTCGTTCTTTTTTCGTCAATTACAGACGAAGATACAACCTCGACGCTGTACTTAAAGAGTACGAAGCTGAGAATGGACctatttttattgaagatGAAAAGGATGAAAAGATGGAAATAGATCAAACTGCAAAATTGGAATCAGCAGAAACTtcacaaaaaacaaaaatggcaATTACTGTAAATCAGCCAGCTAAATAa
- Protein Sequence
- MVLAERNSESVRNGRRSRGPSPNGQSESSSEEDGVPAEKIRVGRDYQVIVPELIPINERKLDLCPEKALLVWSPTSDIPDKKLDEYIILAKEKYGYNGEQALGMLFWHKXXXXXAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTKTSLMDRQARKLTSGGKEGENGSENGSELGSNTDSESEEKKWTIHRGIRRGKNNQTMAGSQGTDAKASSDSENVPQVQGSCSNCGIACHSVRSTPKGHACHSCYLHWRRTGVARPLSSMPGRSNKRKPPRGLVVNHDDLAALAGQPNQAVNTLQAVDTEIVSLKRQIQSNKQQVSALKRKTSDGIDELRPPENSSRINSRWTNDELLLAVQGVRKYGKDFSAIADVIGTKTEAHLRSFFVNYRRRYNLDAVLKEYEAENGPIFIEDEKDEKMEIDQTAKLESAETSQKTKMAITVNQPAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228305;
- 90% Identity
- iTF_00714308;
- 80% Identity
- -