Pare002172.1
Basic Information
- Insect
- Pseudoatta argentina
- Gene Symbol
- RCOR3
- Assembly
- GCA_017607525.1
- Location
- JAANIA010001052.1:1162102-1168211[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.1e-10 4.7e-07 28.9 0.0 3 46 147 190 145 190 0.97 2 3 2.8 1.9e+03 -1.8 0.7 37 44 295 302 291 303 0.87 3 3 1.2e-12 8.2e-10 37.7 0.0 3 46 393 436 392 436 0.98
Sequence Information
- Coding Sequence
- GAATCCGCGCGATTTAACGCGTTGCGATTTCCGTCCGACGAGAAAACTTACGTCGCGATGGTCCTGGCAGAGAGAAATTCGGAAAATGTGCGTAACGGCCGTCGATCGCGAGGCCCCAGCCCTAACGTACAGTCCGAATCGTCCAGTGAAGAGGAAGGAGTTCCAGCAGAAAAGATAAGAGTTGGACGAGATTATCAAGTCGTCGTTCCAGAATTTGTTCCTGTCAATGAACGTCGATTGGATCAATGTCCCGATAGGGCATTATTAGTTTGGTCACCCACCACGGATATACCGGATCAAAAATtggatgaatatattatattggctaaagaaaaatatggtTACAATGGAGAACAGGCATTGGGAATGTTATTTTGGCATAAGCATAATTTGGAACGCGCAGTCCTGGATTTGGCAAACTTTACACCTTTTCCTGACGAGTGGACGGTTGAAgataaagtattatttgaGCAGGCGTTCCAATTTCATGGCAAAAGTTTCCATCGCATTCGACAAATGctaCCTGATAAATCTATTGCAAGTCTTGTGAAATACTACTACAGCTGGAAGAAGACACGAACTAGAACATCATTGATGGACAGGCAAGCACGTAAATTGACGAGCGGTTGCAAAGAAGGTGAAAATGGCAGCGAAAATGGAAGTGAGCTTGGTTCCAACACAGATAGCGAATCCGAAGAAAAAAAATGGACGATCCACCGCGGAATACGTCGTGGAAAGAACCAAGCTGTGCCAGGAAGCCAAGGCACTGATGCTAAGGCCCCATCCGACTCGGAAAACGCCCCTCAGGTTCAGGGCTCGTGTAGCAACTGTGGCATCGCATGCCATAGTGTTCGTGCGACGCCCAAGGGACATGCGTGTCATAGCTGCTATCTACATTGGAGGCGTACCGGTGTAGCAAGACCGTTAACTTCCATGCCGGGTCGTACGAATAAAAGAAAACCACCCCGGGGCTTAGTTGTGAATCACGATGATTTGGCGGCGTTGGCTGGTCAACCAAATCAAGCCAACAACAGTTTGCAAGCTATCGACACTGAGATCGTTAGCTTAAAACGTCAAATACAAGCTAACAAACAACAAGTAAGCGCACTGAAGCGAAAGACTACCGATGGTATCGACCATCTACGACCGCCGGAAGTGTCAGGCCGTATAAATGCACGCTGGACAAATGATGAATTGCTATTAGCGGTTCAAGGCATTAGAAAATACGGAAAGGATTTTGCCGCAATTGCTGAAGTTATTGGTACCAAAACTGAAGCCCATTTACGATCATTTTTCGTAAACTATCGACGAAGATATAATTTGGATGCAGTACTGAAAGAATTTGAGGCTGAAAATGGTCCCATTCTTATCGATGatgaaaaggaagaaaagatggATGTTGATCAATCAAATGATACTGCAGAATCATCTCAGAAGGGGAAAGCTTCCACTGGGCCTGGACAAGCTGCTAAA
- Protein Sequence
- ESARFNALRFPSDEKTYVAMVLAERNSENVRNGRRSRGPSPNVQSESSSEEEGVPAEKIRVGRDYQVVVPEFVPVNERRLDQCPDRALLVWSPTTDIPDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTRTSLMDRQARKLTSGCKEGENGSENGSELGSNTDSESEEKKWTIHRGIRRGKNQAVPGSQGTDAKAPSDSENAPQVQGSCSNCGIACHSVRATPKGHACHSCYLHWRRTGVARPLTSMPGRTNKRKPPRGLVVNHDDLAALAGQPNQANNSLQAIDTEIVSLKRQIQANKQQVSALKRKTTDGIDHLRPPEVSGRINARWTNDELLLAVQGIRKYGKDFAAIAEVIGTKTEAHLRSFFVNYRRRYNLDAVLKEFEAENGPILIDDEKEEKMDVDQSNDTAESSQKGKASTGPGQAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228305;
- 90% Identity
- iTF_01228305;
- 80% Identity
- iTF_00015971;