Basic Information

Gene Symbol
RCOR3
Assembly
GCA_010883055.1
Location
NC:149268396-149407556[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7e-10 6.1e-07 29.1 0.0 3 46 128 171 126 171 0.97
2 3 2 1.8e+03 -1.2 0.3 37 44 239 246 234 247 0.87
3 3 1e-11 8.8e-09 35.0 0.0 3 46 337 380 336 380 0.98

Sequence Information

Coding Sequence
ATGGTATTGGCTGAACGGAATGCAGAAAATCTTAGAAACGGTCGAAGGTCGAGAGGCCCCAGTCCCAATGGGCACACTGATACCTCCAGCGACGATGAAGGTGTTCCTGCCGAAAAAATCCGTGTTGGTCGAGATTATCAAGTCATCGTTCCAGAATTCATTCCTGTTAATGAACGTCGGCTGGACCAATGCCCTGATAGAGCCTTACTTGTTTGGTCACCAACTACAGATATACCTGATCATAAATTGGACGAATATATTATATTAGCAAAAGAAAAATATGGTTATAACGGGGAACAGGCATTAGGTATGTTATTCTGGCACAAGCATAATTTGGAGCGGGCAGTATTGGATTTAGCAAATTTTACTCCCTTTCCTGACGAATGGACGGTGGAAGACAAAGTTTTGTTCGAACAAGCATTTCAATTTCATGGGAAAAGTTTTCATCGCATTCGTCAAATGCTTCCTGACAAATCCATTGCGAGTCTGGTAAAATATTATTACAGTTGGAAGAAAACTCGTACTAGGACATCATTGATGGACAGGCAAGCTCGGAAATTAACTAATAGTGGTAAAGAAGGAGAAAATGGTAGTGAAAACGGCAGTGAATTGGGTTCCAACACAGACAGCGATTCTGAAGAAAAAGGGTCTTGTAGCAACTGCGGCGTTGCTTGTCATAGCGTTCGTGCTACACCCAAGGGACACGCGTGTCATAGCTGCTATCTGCACTGGAGGCGCACCGGAGTTGCAAGGCCATTGAGTTCTATGCCAGGTCGTACGAACAAAAGAAAACCACCACGTGGACTGGTAGTAAATCACGATGACTTGGCAGCACTAGCAGGTCAACCGAATCAAACCAACAGCAGTCTGCAAGCTATTGATACGGAAATCGTTAGCCTGAAGCGACAAATTCAATCAAATAAACAACAAGTTAGTGCTTTGAAACGCAAGACCGCTGACGGAATCGATGAGTTGCGACCACCTGAAGTTACGAATCGTATAAATGCACGTTGGACAAGCGATGAATTGTTACTGGCAGTTCAGGGCGTTCGGAAATACGGCAAAGACTTCGCAGCAATTGCGGATGTAATTGGAACGAAAAACGAATCACATTTAAGATCGTTCTTCGTAAACTACAAACGAAGATACAATCTTGACACCGTATTGAAAGAATACGAAGCGGAAAATGGTCCCATTTTAATAGACGATGAGAAAGAAGACAAGATGGAGGCAGAtcatatttcaaataatgaaatagcaGAAACATCGCAAAAggcaaaaccttctggtggattGAATCCATCAcctaaataa
Protein Sequence
MVLAERNAENLRNGRRSRGPSPNGHTDTSSDDEGVPAEKIRVGRDYQVIVPEFIPVNERRLDQCPDRALLVWSPTTDIPDHKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTRTSLMDRQARKLTNSGKEGENGSENGSELGSNTDSDSEEKGSCSNCGVACHSVRATPKGHACHSCYLHWRRTGVARPLSSMPGRTNKRKPPRGLVVNHDDLAALAGQPNQTNSSLQAIDTEIVSLKRQIQSNKQQVSALKRKTADGIDELRPPEVTNRINARWTSDELLLAVQGVRKYGKDFAAIADVIGTKNESHLRSFFVNYKRRYNLDTVLKEYEAENGPILIDDEKEDKMEADHISNNEIAETSQKAKPSGGLNPSPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01228305;
90% Identity
iTF_00224480;
80% Identity
-