Basic Information

Gene Symbol
RCOR3
Assembly
GCA_964017025.1
Location
OZ024780.1:3449143-3453242[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1e-09 1.2e-06 29.0 0.0 3 46 128 171 126 171 0.97
2 3 4.1 4.8e+03 -1.8 0.7 37 44 276 283 272 284 0.87
3 3 8.7e-13 1e-09 38.8 0.0 3 46 374 417 373 417 0.98

Sequence Information

Coding Sequence
atggttttggCCGAGAGAAATTCGGAGAACGTTAGAAACGGTCGTAGATCCAGAGGCCCCAGCCCCAATGGACAGACGGAGTCCTCCAGCGAGGAAGACGGTGtTCCAGCGGAAAAAATCCGTGTTGGACGCGATTATCAGGTACTCGTACCGGATCTGATCCCTGTCGGTGaaCGTCGAATGGACCAGGTAGCGGACAGAGCTCTCCTGGTATGGTCGCCGACCGTTGACATACCCGATCAGAAATTGGACGAATACATTATACTAGCCAAGGAGAAATATGGTTACAACGGCGAGCAGGCATTGGGTATGCTATTCTGGCACAAGCACAATTTGGAGCGAGCCGTACTGGACTTGGCCAACTTCACACCCTTCCCCGACGAGTGGACGGTCGAGGATAAGGTTCTCTTTGAGCAGGCGTTCCAATTTCATGGTAAAAGTTTTCACAGAATAAGACAAATGTTGCCCGACAAGTCAATCGCGAGTCTCGTAAAATATTACTACAGTTGGAAGAAAACGAGAACCCGGACGTCGCTTATGGACAGACAAGCGAGAAAGCTTACGAGCGGCGGCAAGGAGGGTGAAAACGGAAGCGAGAACGGCAGCGAGTTAGGTTCCAACACCGATAGCGAGTCGGAAGAAAAAAAATGGACGATCCATCGCGGAATACGTCGTGGAAAAAACCAAGCTGTACCAGGAAACCAAGGCACCGACGCCAAAGCCTCGTCCGACTCGGAAAACGTCCCCCAGGTTCAGGGGTCTTGTAGCAACTGCGGCGTTGCTTGTCATAGTGTTCGTGCGACGCCGAAAGGACACGCGTGTCATAGCTGCTATCTGCACTGGAGGCGTACTGGTGTCGCTAGGCCACTGAGTTCGATGCCCGGTCGTTCGAACAAACGAAAACCGCCGCGTGGACTGGTAGTAAATCACGACGATCTGGCGGCGTTGGCTGGCCAGCCGAGCCAGGCGAACAACAGTCTCCAAGCTATCGACACCGAAATTGTTAGCCTCAAGCGACAAATACAGTCGAACAAGCAACAAGTGAGTGCACTCAAGCGAAAAACCGTCGATGGAATCGACGACTTGCGTCCACCGGAAGTGTCCAGTCGCATAAACGCCCGTTGGACCAGCGACGAGCTCCTCCTCGCGGTTCAGGGCGTTCGAAAATACGGCAAGGACTTTTCCGCCATCGCCGACGTTATAGGTACGAAAACCGAGGCTCACCTACGTTCGTTTTTCGTAAATTATCGAAGAAGGTACAATCTTGACGCGGTTCTCAAAGAATACGAGGCTGAGAACGGTCCCATTCTAGTCGACGacgagaaggaagaaaaaatGGACGTTGATCCTCCGGCGAACAATGAAAACGCGGAAACGTCGCAGAGAACGACAAAATCGTCGGTCGGCGTCGGTCAAGCGGCAAAATAA
Protein Sequence
MVLAERNSENVRNGRRSRGPSPNGQTESSSEEDGVPAEKIRVGRDYQVLVPDLIPVGERRMDQVADRALLVWSPTVDIPDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTRTSLMDRQARKLTSGGKEGENGSENGSELGSNTDSESEEKKWTIHRGIRRGKNQAVPGNQGTDAKASSDSENVPQVQGSCSNCGVACHSVRATPKGHACHSCYLHWRRTGVARPLSSMPGRSNKRKPPRGLVVNHDDLAALAGQPSQANNSLQAIDTEIVSLKRQIQSNKQQVSALKRKTVDGIDDLRPPEVSSRINARWTSDELLLAVQGVRKYGKDFSAIADVIGTKTEAHLRSFFVNYRRRYNLDAVLKEYEAENGPILVDDEKEEKMDVDPPANNENAETSQRTTKSSVGVGQAAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01228305;
90% Identity
iTF_00828710;
80% Identity
iTF_00721187;