Npin025375.1
Basic Information
- Insect
- Neodiprion pinetum
- Gene Symbol
- RCOR3
- Assembly
- GCA_021155775.2
- Location
- CM037745.1:18456678-18465386[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.7e-10 1.6e-06 29.0 0.0 3 46 128 171 126 171 0.97 2 3 4.3 8.1e+03 -2.1 1.0 37 44 276 283 274 284 0.86 3 3 5.4e-13 1e-09 39.2 0.0 3 46 374 417 373 417 0.98
Sequence Information
- Coding Sequence
- ATGGTTTTGGCTGAAAGAAACACGGACAATGTTCGAAATGGGCGAAGATCTCGAGGTCCCAGCCCCAATGGGCAGACGGAGTCGTCCAGCGAGGAGGACGGAGttccaGCAGAGAAAATACGCGTCGGACGTGACTATCAAGTTATTGTTCCAGAATTTATTCCTCTCAATGaacGACGTTTGGACCAATGCCCGGATAGAGCACTACTTGTTTGGTCTCCAACAACTGATATACCTGATCAAAAATtGGATGAATACATTATAttagcaaaagaaaaatatgggTACAATGGAGAACAGGCTTTAGGAATGCTTTTTTGGCATAAACACAATTTGGAGCGAGCTGTTTTGGACTTGGCAAATTTCACACCATTCCCTGACGAATGGACCGTCGAAGATAAAGTTTTGTTTGAACAAGCCTTTCAATTTcatggaaaaagttttcatcgTATTCGTCAAATGCTTCCAGACAAATCAATCGCAAGCCTCGTGAAGTATTACTACAGTTGGAAGAAAACGAGAACTAGAACGTCGTTGATGGATAGACAAGCGCGAAAATTAAATAGTGGAGGAAAAGAAGGCGAAAACGGCAGCGAAAATGGAAGTGAACTGGGTTCCAATACCGATAGTGAGTCAGAGGATAAAAAGTGGACGATCCACCGCGGAATACGTCGTGGAAAAAACCAAGCTGTGCAGGGGAGCCAAGGCGGTGATGCCAAGGCCTCGTCCGACTCGGAAAACATGCCTCAGGTTCAGGGGGCGTGTAGCAACTGCGGTGTCGCTTGTCATAGCGTTCGTACAACGCCCAAGGGACATGCGTGTCATAGCTGCTATCTGCACTGGAGGCGTACTGGAGTTGCCAGGCCCCTGAGCTCTGTGCCAGGTCGTTCGAACAAAAGAAAACCACCACGAGGATTGGTCGTCAATCATGACGATCTAGCAGCATTAGCTGGCCAACCAAACCAGGCAAACAACAGTCTGCAAGCCATTGACACCGAAATTGTTAGCCTGAAACGCCAAATACAATCGAACAAACAGCAAGTAAGTGGTCTAAAACGGAAGACAACCGACGGCATTGACGATTTACGACCACCAGAGGTTTCCAGTCGTATTAATGCACGATGGACAAATGACGAATTATTACTAGCTGTTCAAGGAGTTAGGAAATATGGAAAAGACTTTTCTGCTATCGCCGACGTGATTGGCACTAAGACAGAAGCCCACCTAAGATCATTCTTTGTTAATTATCGACGAAGATATAATTTGGACGCAGTCCTAAAAGAATATGAGGCTGAAAACGGACCCATCTTAATCGATgatgaaaaagatgaaaagatGGAGGTCGATCAAGTACAGAATAGTGAAAATGCGGAGACGTCTCAAAAAGCAAAAGCGTCTGTCGCGCCAGGACAAACGACTAAATAG
- Protein Sequence
- MVLAERNTDNVRNGRRSRGPSPNGQTESSSEEDGVPAEKIRVGRDYQVIVPEFIPLNERRLDQCPDRALLVWSPTTDIPDQKLDEYIILAKEKYGYNGEQALGMLFWHKHNLERAVLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTRTSLMDRQARKLNSGGKEGENGSENGSELGSNTDSESEDKKWTIHRGIRRGKNQAVQGSQGGDAKASSDSENMPQVQGACSNCGVACHSVRTTPKGHACHSCYLHWRRTGVARPLSSVPGRSNKRKPPRGLVVNHDDLAALAGQPNQANNSLQAIDTEIVSLKRQIQSNKQQVSGLKRKTTDGIDDLRPPEVSSRINARWTNDELLLAVQGVRKYGKDFSAIADVIGTKTEAHLRSFFVNYRRRYNLDAVLKEYEAENGPILIDDEKDEKMEVDQVQNSENAETSQKAKASVAPGQTTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228305;
- 90% Identity
- iTF_01228305;
- 80% Identity
- iTF_01048161;