Hqua012124.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Halictus quadricinctus
Gene Symbol
Zfy1
Assembly
GCA_028454245.1
Location
CM052123.1:12159927-12166649[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.096 7.8 7.3 0.8 2 23 115 136 115 137 0.94
2 17 3.4 2.8e+02 2.4 4.7 1 23 143 165 143 165 0.97
3 17 0.033 2.7 8.7 0.5 2 23 171 192 170 192 0.97
4 17 0.0012 0.094 13.3 2.3 2 21 471 490 470 490 0.95
5 17 2.2 1.8e+02 3.0 1.0 1 23 558 580 558 580 0.82
6 17 2.7 2.2e+02 2.7 0.1 3 23 788 808 786 808 0.93
7 17 0.005 0.41 11.3 0.3 1 23 816 838 816 838 0.98
8 17 0.056 4.5 8.0 1.0 2 23 934 955 933 955 0.95
9 17 1.9 1.6e+02 3.2 0.8 3 23 967 987 965 987 0.91
10 17 0.59 48 4.8 4.2 1 23 1036 1058 1036 1058 0.96
11 17 0.0031 0.25 12.0 0.2 1 23 1064 1086 1064 1086 0.98
12 17 0.035 2.8 8.7 0.3 1 23 1160 1182 1160 1182 0.97
13 17 5e-05 0.004 17.6 0.6 1 23 1188 1210 1188 1210 0.97
14 17 0.0051 0.42 11.3 2.6 1 23 1258 1280 1258 1280 0.97
15 17 0.00084 0.068 13.8 1.7 1 23 1286 1308 1286 1308 0.99
16 17 0.59 48 4.8 2.8 2 23 1400 1421 1399 1421 0.97
17 17 6.7 5.4e+02 1.5 0.5 2 23 1429 1450 1429 1450 0.81

Sequence Information

Coding Sequence
ATGTCAGGAAGGCTGCCCCGTCTGCGTGCACTTCGTCCGCGACCTCAGCAATCCAAAGTAAAAGAAGGTAACCTTAAAGAAGATCTTAAGGAGACTGCGATGAAGGGGCAACAGTCGCGAACCTCCGCGGAGGAGCTTTCGTTTGAAGAGAAAGACGATGATTCCGCGAAGGACAGTTTAAAGGGCGAACAAGACGGCCTCGTCGACTGTACCGGGTCCTCGCAGAGCTACGAATGTAGAACCTGCAAACCTCCGAAGCCTCTTCCGATTCTTAAGGCTTACCTCGACCATCTGAAAAAGGAGCACAAACAAAAGGGGAAATTCGCACGTGATGCTGGAAATCGATGTTCAATGTGTCCGTATGTTGCATTAAATTCGAGAGACCTCGAAACCCACCAAAGAGTGCATCATTTAAAAAGGAGATTCTTTCGATGCTCCAAATGCTCCTACGTAACGCATGTACGTGCTCGTTACACAAAACATGTGAAGTATCATTCCATGCCAATGATCAAGTGCGACGCCTGTGATTTTCGTACACCGTACAAGTGGAATTTGGACAGACACACTAGGAACCACGGTGGAGGGGGAGCTTTTCAGTGCCGTGCTTGCAATTTCACAGCTGACATCAGGCAGAGCTTGACAGTGCACGAGACCAATCACCACGAGCCACCCGTAGGACAGACAAATCGCAAGTCTAATGCACCTTTTGAGCGTAAGCCGAGAAATAGTCCTAAGCGTTACAATCAGGTGGGTGCGAGCGATTTTCGGGATACGCTTCACATATCCGGAAGCACGACGGTGTCCCTCAGTCCCGGCGACTCGTTTATGTCCGATCAATCGATGAATTCCATGGAAGATAAAAGAAGTGCAATAGCGAATGCAGAATGCATAGCGTTGAAATGCGAGGAGAAGGGCTGCCAGTTCATTACCGCCTGGGACTCGGAAATGCAAAGACATCTGGCAGAGTGTCATGCACCGGTTACACCGAACAAGTCTCGAAAACCATTGCCAATGTTGATTCCCTTGAGTCCTGCTAAATCCAATAATACTGCCAGTGGATCATCCACAACACTGTTAAAAGTTCCACGTGTAAGAGTACGGCCGGAGCTTGCTCAAATTGCCAGAGACACAGAACTGGCTAGGTTGTATGGGAATAAAGAAGTCAACAACATAAAGAAGGATGCGAATAACGCGGCAGATTTGTTTGAAAAAAAAAATGCGTCCTTCTTTGATAAGCTAAAGGAAAAGCTTACTACATCGGCGTCGATAAATAACGGAGTGGCGGAGGTAGCAGTAAGTACCACGAACGATTTGAAATGCTGGTGTACATTTAAAGCTAGTAGCATGGAGGAGCTGGCTTGTCACAAACAAACACACCACACTGCTCTCAGCGTGTCTGTGGGCACGACGCGTTGCCCAAAGTGCAGAAGACGTTGCAAAAACTCGACTGATCTACAAGCGCATATGCAGTGTTGTCGCTCGACGAGCAACGATTCGTCCATAGACAGTAGCTTAGAAAAATTATCGAATTGTTCAGAACTACGTGTGACCTCGTATCGCGGTGAATATGCATTCCCAGCGCAAACGGATTGGGACGTAAATCTCAGTGGACTCAATTCTTCTGGATCATCGGTTGAAGGCACCTCAGCGCATCCAAGTGGCCGCCGGGTATTCAAATGCCCGCATTGTCCATTTTGGGCATCCACCGCAAGTCGCTTTCACGTTCATATAGTCGGTCATTTAAATCGGAAGCCATTCGAGTGTTCCCTGTGCGCGTACCGCTCTAACTGGCGGTGGGACATCACAAAACATATTAAACTTAAAGCAGCTAAAGATCCAGTTCATATGACTGCCAGGGTACTTATGACGGATGAAACCGGTCGACGGAATTATTCCAAGTATAACAAGTATCTTGCACAGGTCGAGCAACAATCATGGGACGAGCAAAATATGGAGGAGCGTAGCGTGGAAGAGAGTAATTCCGATGAGCCACCGGCTAAGTTGTTGATTATGAACAGCAACGAGTATTTGCAAGCGCCGGAATATAGTTCCACTCCGCTCTCGATTGTGTCCACAAGCGAAGGAAGTAATGTTAACACTATCAATATTGGCCTAAGACCACCGCCTCCGCTAAAAGCTGCCGCTCGAAATCGTGGTCAATCCTTGCTAAAAAATAACTTGATCTCACCACACGGACAGAGTGGATCCACTTCCACTACGCTCTCCACAGACAATAAACGTACCATGTGGAAATGTAAACGTTGTAACTTCAGACATTCGAACAGAGAGACCGTATCGTTGCATGTCAAGTCCCACAATGAATCGGAGCAACGCAACGAAGACGAGAAAAATCCATTCGGTTGCGGAGATTGCCCATTTTCCGCGCCAGACGCTGCAACTTTATCGATACATAGAGTACATCATCGCCCCAACTTGGAAGCCATTTTCAAATGCTATCTGTGTCCCTATTACGTCAGCACGAAAGCGGAACTTTTGGATCATGTTAGGCTCCACGGCGAGGAGCTCGCGGTCGTGCACCAACAGAGTACAGATTATAATCTTTCATCGAGTAAATATAAAGGGCAACAGGCTAATTCCGATAACAGTAACAATCGTATGAAACAGGAGAGGTCTATGGAACAGGTGATCCACATAACCACGCAGAACAACGTGACCTGCATATCGAACACCTCGAAGAACGCCAATGCACCGCCGCCATTGCTGTTGGATACGCGATCACTGCCAGATGCGCCGTTGGTCTGGGTGTCTAGACTAGACGGCACCCTCGCGAAGATGTTGAAATGCCGTCATTGTCCGTACGTGTCTTCTAGACGCGCGGAGGTCCGTGATCACGAGACCATGCACCTCGACACTCCCAGTCAAGGGCCCGTCATCGCTTGCACGGATTGCAGCTTTACCTGTACCCGTCGAGAAATTATGGTCGCCCACACGGAAATGCATTCCGGGTCGTTGGGTACCGTTCACTGTTTGGTGGACGACACCAGACCCGACTCACAGCAACTGAGCGACCTGACCACGCTTCTTGGATTTGCGCATACTCCCGCGTTAGGTTCGGAGCCCGATCTGCGCGACTCCAGATTGGTGCATTGTTGCAGCAAATGCCCGGCACGGTTCCTCTACGAGAAAGAACTGAGAATCCATTTGCGGTACCATTCCACAGAGTTAGCGTACTCGTGCCAATGGTGTTCGTACGCCGCTCGCCAGCCGGCTCATCTGTTGGCCCATCAGAAGGCGCACTCGACGGAGTATCAGGAGCGTACGAAGTACTTATTGTCTCTGTACGGTCACTCCCAACGATACCCACCTCCCACCACGGCTTGCGTCGAAGCAGGCAGCCAGGATTCGAGCAATCAGAGTTGCACGGTCGCGTGGATCGTCGTCGAGATCTCCGAGACCTCGGGCAATGGCTTTAACAATGTCGGCAATCCGAATCAACCGAGAACCGGAAATCAAGTGTTCACCTGTGCCAAATGTCCTGCCCGTTACTTTAAGTTAGACGCTTTGGAGTACCACATGACGCTGCATGGATCGAACAACAGATTCAAGTGCACCGAGTGTGACTACTCCTCGAAGACTGCCCAGAATCTGGTGAAACACCAAGTGGTTCATCGACGACAAAACGAGACTAGCGAGATATCTGCGAATCTGTCACCGCCGCCCTCCGACCCTCAGTTTGGACTGTTTATGCGAGGCAACCCGAACTTCGTCTATCCCGGTTACCTGAGAAACGGCAGACTGAAAGAGAAACGGTACAAATGCCACAAGTGTCCCTCCGCGTTCGAGAAACGGGAGCAGTACAGGGTTCATCTGACGTTGCATGGCGCAAAACAAAGATACCGTTGCGACACCTGCGACTATTCCGTGAAATATTATGCGAATTATATTCAGCATCTGAAGAAGCACCAGGCGAACGCGGAGGCTCAAGCCTCGCGCCGGCAATTCGAGGACGACACGATCACCATCGACAGCGACACCATCTCCGACAACGTGGCGTCCGTGTCCCGTTCGGGGAAGACTCTCAAGTCGTCCTGCAGCTCGTCGGCCACAGTGTCCTTGAACGGTACTTCGATGCTAAACTACGGTGGCATGCAAGCCTCCAATCAGGACAAACAGTCGTTGATACTGATGCAGAAAAAGGGTATGCTCGTGTCACATAACGAGGAGACTGAGACGTTACGCTGCCAGAGCTGTCCCTTCTCGACCTGCGACAAAGACGCCATGGACTCCCATAAACGCCGCCACGGTATAGAACGAGTGACACCGTCCTGCCCCCATTGCGATTACAGACCGAGAAAAGATGAGAATATTGGCGAACATATCAGGCTGCACTTCACTAGACTTTACAAGCCTGAGTCCTATCTAATCATAGAGTTTTTAACGTTAACGATGAAGAAACCATCCAACAATGGAAAGGACGAGAAACAGAAGTCGACGGAACTATTGTTTAAAGAATATCAAGACGGAAGATTCTTTCCCCTTAACGATACCAATTCGTTCGGCAACAGTTCGACCGTAAATAGCTGTAAGGAGAAAGTTTTAGTGGATCCCAATACCGGAGAAACGAAACATTTaaccgtttaa
Protein Sequence
MSGRLPRLRALRPRPQQSKVKEGNLKEDLKETAMKGQQSRTSAEELSFEEKDDDSAKDSLKGEQDGLVDCTGSSQSYECRTCKPPKPLPILKAYLDHLKKEHKQKGKFARDAGNRCSMCPYVALNSRDLETHQRVHHLKRRFFRCSKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHETNHHEPPVGQTNRKSNAPFERKPRNSPKRYNQVGASDFRDTLHISGSTTVSLSPGDSFMSDQSMNSMEDKRSAIANAECIALKCEEKGCQFITAWDSEMQRHLAECHAPVTPNKSRKPLPMLIPLSPAKSNNTASGSSTTLLKVPRVRVRPELAQIARDTELARLYGNKEVNNIKKDANNAADLFEKKNASFFDKLKEKLTTSASINNGVAEVAVSTTNDLKCWCTFKASSMEELACHKQTHHTALSVSVGTTRCPKCRRRCKNSTDLQAHMQCCRSTSNDSSIDSSLEKLSNCSELRVTSYRGEYAFPAQTDWDVNLSGLNSSGSSVEGTSAHPSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAAKDPVHMTARVLMTDETGRRNYSKYNKYLAQVEQQSWDEQNMEERSVEESNSDEPPAKLLIMNSNEYLQAPEYSSTPLSIVSTSEGSNVNTINIGLRPPPPLKAAARNRGQSLLKNNLISPHGQSGSTSTTLSTDNKRTMWKCKRCNFRHSNRETVSLHVKSHNESEQRNEDEKNPFGCGDCPFSAPDAATLSIHRVHHRPNLEAIFKCYLCPYYVSTKAELLDHVRLHGEELAVVHQQSTDYNLSSSKYKGQQANSDNSNNRMKQERSMEQVIHITTQNNVTCISNTSKNANAPPPLLLDTRSLPDAPLVWVSRLDGTLAKMLKCRHCPYVSSRRAEVRDHETMHLDTPSQGPVIACTDCSFTCTRREIMVAHTEMHSGSLGTVHCLVDDTRPDSQQLSDLTTLLGFAHTPALGSEPDLRDSRLVHCCSKCPARFLYEKELRIHLRYHSTELAYSCQWCSYAARQPAHLLAHQKAHSTEYQERTKYLLSLYGHSQRYPPPTTACVEAGSQDSSNQSCTVAWIVVEISETSGNGFNNVGNPNQPRTGNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCTECDYSSKTAQNLVKHQVVHRRQNETSEISANLSPPPSDPQFGLFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYIQHLKKHQANAEAQASRRQFEDDTITIDSDTISDNVASVSRSGKTLKSSCSSSATVSLNGTSMLNYGGMQASNQDKQSLILMQKKGMLVSHNEETETLRCQSCPFSTCDKDAMDSHKRRHGIERVTPSCPHCDYRPRKDENIGEHIRLHFTRLYKPESYLIIEFLTLTMKKPSNNGKDEKQKSTELLFKEYQDGRFFPLNDTNSFGNSSTVNSCKEKVLVDPNTGETKHLTV