Abic008003.1
Basic Information
- Insect
- Andrena bicolor
- Gene Symbol
- Zfy1
- Assembly
- GCA_960531205.1
- Location
- OY482664.1:51884552-51891469[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.41 34 5.4 1.3 2 23 117 138 117 139 0.93 2 15 3.6 3e+02 2.5 4.8 1 23 145 167 145 167 0.97 3 15 0.037 3.1 8.7 0.5 2 23 173 194 172 194 0.97 4 15 0.011 0.88 10.4 1.5 2 20 475 493 474 494 0.94 5 15 2.4 2.1e+02 3.0 1.0 1 23 562 584 562 584 0.82 6 15 4.2 3.5e+02 2.3 0.1 3 23 796 816 794 816 0.93 7 15 0.0054 0.45 11.3 0.3 1 23 824 846 824 846 0.98 8 15 0.11 8.9 7.3 1.1 2 23 940 961 939 961 0.95 9 15 0.078 6.5 7.7 0.4 3 23 973 993 971 993 0.95 10 15 0.0034 0.29 12.0 0.2 1 23 1070 1092 1070 1092 0.98 11 15 0.038 3.2 8.7 0.3 1 23 1163 1185 1163 1185 0.97 12 15 5.5e-05 0.0046 17.6 0.6 1 23 1191 1213 1191 1213 0.97 13 15 0.0057 0.48 11.3 2.6 1 23 1260 1282 1260 1282 0.97 14 15 0.00093 0.078 13.8 1.7 1 23 1288 1310 1288 1310 0.99 15 15 0.26 22 6.0 2.0 2 23 1402 1423 1401 1423 0.97
Sequence Information
- Coding Sequence
- ATGTCAGGACGGCTGCCCCGTCTGCGGGCGCTTCGCCCACGACCCCCTCAGACCAAGACGGAGCCGAGGAGAGAAGGTAACCTTAAAGAGGACcgcggggaagccgcgatgaagGGGCATGTGCCACGGGACGACGCCGAGGAGGTGACGGACGGTGCCGACGATGGCTTGACGAGGGACGAGCCCAAGTGCGAGCCGGACGACCTCCTCGACTGCTCGGGCACCTCGCAGGGATACGAGTGCAAAACGTGCAAACCGTCCAAGCCGATGGCGAGCCTCAAGGCGTACCTCGACCATCTGAAAAAGGAGCACAAACAAAAGGGAAAGTTTGTGCGCGATATTGGAAACAGATGCTCAATGTGTTCTTATGTCGCATTAAGTTCGAGGGATCTTGAGACTCACCAAAGGGTGCACCATTTAAAACGAAGATTCTTTCGCTGCACTAAATGCTCTTACGTAACGCACGTGCGCGCTCGTTATACGAAGCATGTCAAGTACCATTCTATGCCGATGATCAAGTGCGACGCCTGCGACTTTCGTACGCCGTACAAGTGGAACTTGGACAGACACACTCGGAATCACGGCGGAGGCGGAGCTTTTCAATGTAGGGCCTGTAATTTCACAGCGGACATTAGGCAGAGCTTGACCGTGCACGAGACCAATCACCACGAACCTCCCGTCGGTCACACCAACCGCAAATCTAGCACACCCTTCGAGCGTAAACCACGAAACAGTCCTAAGCGTTACAATCAGGTGGGTGCGAGCGACTTTAGAGAGGCGCTACACATATCCGGGAGCACGATGGTGTCCCTCAGCTCCGGAGACTCGTTCCTGTCCGACCAGTCGATGAATTCCATAGAAGACAAGAGGAGCGCGATAGCCAATGCAGAGTGTATAGCGTTGAAGTGCGAAGAGAAAGGCTGCCAATTTATCACAGCATGGGACTCTGAAATGCAACGCCACCTAGCAGAGTGCCATGCCCCGGTTACGCCGAGCAAATCCAGGAAACCACTGCCAATGTTGATCCCTCTAAGCCCTGCCAAATCTAACAACGCTACCTCCAGTGGGCTCTCCACCACACtgctaaaagttccgcgggttAGGGTAAGGCCGGAACTTGCACAAATCGCGAGAGACACGGAACTAGCGAGGTTGTACGGGAATAAAGAAGGCAGCAATTTAAAGAAGGATGCCGGTAACGCGGCAGAtttgttcgaaaaaaaaaacgcgtccTTCTTTGATAAGCTGAAGGAAAAGCTTACCACGTCGGCGTCGATTAATAACGGAGGTGCGGAGGTGGCTGTAAGTAGTAACGCGAACGATTTGACATGCTGGTGTACGTTTAAAGCTAGTAGCATGGAGGAGCTGGCTTGTCACAAGCGAACGCACCACACTGCTCTCAGTGTATCCGTGGGCACGACGCGTTGCCCGACGTGCAGGAGGCGTTGCAAAAGTTCCACAGATCTGCAAGCGCACGTGCAGTGTTGCCGCCCGACGGGCAACGACACGTCCATAGACAGTAGCTTAGAAAAATTAACGGGTTGTTCAGAGCTCCGTGTGACCTCGTATCGCGGTGAATACGCATTCCCAGCGCAAACGGATTGGGACGTTAATCTCGCTGGACTGAATTCCCCTGGATCATCGGTTGAAGGCGCCTCGACGCATCCAAGCGGCCGACGGGTATTCAAATGCCCGCATTGTCCATTTTGGGCGTCCACCGCAAGTCGCTTTCACGTTCATATTGTCGGTCATTTAAATCGGAAGCCATTCGAGTGTTCCCTGTGCGCGTATCGCTCTAACTGGCGATGGGACATCACAAAACATATTAAACTTAAAGCAGCTAAAGATCCAGTTCATATGACCGCCAGGGTACTTATGACGGATGAGACAGGTCGACGGAATTATTCGAAGTATAACAAGTATCTTGCACAGGTCGAGCAACAGTCGTGGGACGATCAGAACATGGAGGAGCATAGCGTCGAGGAGAGCACGTCCGACGAGCCGCCGACAAAGTTGCTAATAATGAACAGCAACGACTATTTGCAGACGCCGGAACTCACGGCTGCGCCTGTTTCGATCACTTCCGCCGGCGATGGGAGCCACGGCGTTAATGCTATCAATATTGGTCTGAGACCGCCGCCTCCTCTCAAAGCTGCCGCTAGAAATCGAGGGCAGTCCTTGCTGAAAAACAATCTGATCTCCCCGAGCGGGCAGAGCGAGGCAGCTGGGTCCGCTTGCGCCGCGAGCACAGAGGAGACCAAGCGCACTATGTGGAAGTGCAAGCGTTGCAACTTCAGACACTCCAACAGGGAAACCGTATCGTTGCACGTGAAGTCTCACAACGAATCGGAACAGCGCTACGTGGATGAAAAAAACCCATTCGGCTGTGGAGATTGTCCGTTCTCCGCGCCCGACGCGGCGACTCTGTCTATGCACAGAGTCCATCATCGCCCCAATTTGGAAGCGATTTTCAAATGCTACCTGTGTCCGTACTACGTCAGCACTAAAGCAGAGCTTCTAGAGCACGTCAGGCTTCACGGAGAGGAGCTGGCTGTGGTGCACCAACAGAACGTAGACTACAATTTCTCCCCCGCGAAATGTAAAGCTTCCAACAGCGATGGCAGTAACAGTCGCACGAAGGAAGAGAAGCCTGTCGAGCAGGTGATCCACATCACCACCCAGAACAATGTCACTTGCGTCGCCAACGCctcgaagaactcgaacgcgcCACCGCCGTTGCTTCTGGACACTCGAGCACTGTCGGAGCCGCCGCTTGTTTGGGTGTCCAGGCCAGATGGCACCCTGGCGAAGATGTTGAAGTGCCGTCACTGCCCCTACGTGTCGTCGCGGCGCGTCGAAGTCCGCGACCACGAGACTATGCACCTCGACGCCCCTAGCCACGGCCCTGTGATCGCTTGCACGGACTGCAGTTTCACGTGCACGCGCCGCGAGGCGATGGTCGCTCACGCAGACATGCATTCCGGGTCCCTGGGCACCGTCCACTGCTTGGTGGACGACGGGAGGCCAGACTCTCAGCAGCTGAGCGACCTAGCAACGTTCCTCGGCTTCACTCATCCTCCTGTGCTGGGCTCGGAGCCAGACTTGCGGGACTCCAGGCTGGTGCACTGCTGCAGCAAATGCCCGGCGCGGTTCCTCTGCGAGAAGGAGCTGAGGATCCACTTGCGCTACCATTCCACGGAGCTGGCTTACTCTTGCCAGTGGTGTTCGTACGCCGCTCGCCAACCAGCTCACCTCCTCGCTCATCAAAAGGCGCACTCTACCGAGTACCAAGAGCGCACCAAGTATCTTCTGTCTCTGTACGGCTATTCGCAAAGGTATCCGACCCCTACCACGGCCTGCGTCGAAGCGGGCAGCCACGACGCGGAAAACTCGGCGACCACGGTCGCCTGGATCGTCGTGGAGGTCTCGGAGACCTCGAGCAACAGCTTCGATAACCACCCGAATCAACGGACCGGGAATCAGGTGTTCACTTGCGCCAAATGCCCGGCCCGTTACTTCAAGCTGGACGCTCTCGAGTACCATATGACCCTGCATGGATCGAATAATAGATTCAAGTGCACGGAGTGCGATTACTCCTCCAAGACCGCGCAGAATCTGGTGAAGCACCAGGTGGTCCATCGGCGACAGAACGAGGCGACCGAGATGGCCGCGAGCCTGTCGCCGCCCCCGGATCCCCAGTTCGGCATCTTCATGCGCGGCAATCCGAACTTTGTCTATCCGGGCTACTTGAGGAACGGACGGTTGAAGGAGAAACGGTACAAGTGCCACAAATGTCCCTCCGCGTTCGAGAAGCGGGAGCAGTACAGGGTTCATCTGACCCTGCACGGCGCGAAACAGAGATACCGTTGCGACACTTGCGACTATTCCGTCAAGTACTATGCCAACTACATCCAGCACCTGAAGAAGCACCAGGCGAACGCCGAGGCACAGGCCTCGCGCAGGCAGTTCGAGGACGACACGATCACCATCGACAGCGACACGGCGTTCGACGGCATGGTGTCGGTGTCTCGCTCGGGGAAGACGCTGAAATCGTCGAGCGCCTCCGCCTCGGCTGCAGCTGTGAATGGATCCTCGGTGCTGAATTACGGGGGAGCCCAGACCTCGAATCAAGACAAGCAATCCATGATGCTGTTGCAAAAGAAGGGGATACTGTTGGCTCCCAACGAGGAGATAGAGACTTTACGCTGCCAGAGCTGCCCATTCTCCACCTGCGACAAGGATGCCATGGACGCTCATAAACGTCGGCACGGCATCGAGAGGATGACTCCGTCGTGCCCCCATTGCGATTACATACCGAGGAAGGACGAGAATATCGGCGATCACATCAGACTACATTTCACAAGACTCTACAAACCGGAGTCCTATCTTATCATAGAACTCCTGACATTGACGATGAGGAAGATCGCCGCGAACGGAAAGGAGGAGAAGCAGAAGCCTACGGAGCTGCTGTTTAAAGAATGCACGGACGGAAGGTTCTTTCCGTTTAACGAAACGAACTCCACTGGCAATCCTACTCCTTGCAAGGAGAAAGTCATAGTAGATCCAAACACTGGAGAGACGAAGCATCACTTGGCTGTTTAG
- Protein Sequence
- MSGRLPRLRALRPRPPQTKTEPRREGNLKEDRGEAAMKGHVPRDDAEEVTDGADDGLTRDEPKCEPDDLLDCSGTSQGYECKTCKPSKPMASLKAYLDHLKKEHKQKGKFVRDIGNRCSMCSYVALSSRDLETHQRVHHLKRRFFRCTKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHETNHHEPPVGHTNRKSSTPFERKPRNSPKRYNQVGASDFREALHISGSTMVSLSSGDSFLSDQSMNSIEDKRSAIANAECIALKCEEKGCQFITAWDSEMQRHLAECHAPVTPSKSRKPLPMLIPLSPAKSNNATSSGLSTTLLKVPRVRVRPELAQIARDTELARLYGNKEGSNLKKDAGNAADLFEKKNASFFDKLKEKLTTSASINNGGAEVAVSSNANDLTCWCTFKASSMEELACHKRTHHTALSVSVGTTRCPTCRRRCKSSTDLQAHVQCCRPTGNDTSIDSSLEKLTGCSELRVTSYRGEYAFPAQTDWDVNLAGLNSPGSSVEGASTHPSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAAKDPVHMTARVLMTDETGRRNYSKYNKYLAQVEQQSWDDQNMEEHSVEESTSDEPPTKLLIMNSNDYLQTPELTAAPVSITSAGDGSHGVNAINIGLRPPPPLKAAARNRGQSLLKNNLISPSGQSEAAGSACAASTEETKRTMWKCKRCNFRHSNRETVSLHVKSHNESEQRYVDEKNPFGCGDCPFSAPDAATLSMHRVHHRPNLEAIFKCYLCPYYVSTKAELLEHVRLHGEELAVVHQQNVDYNFSPAKCKASNSDGSNSRTKEEKPVEQVIHITTQNNVTCVANASKNSNAPPPLLLDTRALSEPPLVWVSRPDGTLAKMLKCRHCPYVSSRRVEVRDHETMHLDAPSHGPVIACTDCSFTCTRREAMVAHADMHSGSLGTVHCLVDDGRPDSQQLSDLATFLGFTHPPVLGSEPDLRDSRLVHCCSKCPARFLCEKELRIHLRYHSTELAYSCQWCSYAARQPAHLLAHQKAHSTEYQERTKYLLSLYGYSQRYPTPTTACVEAGSHDAENSATTVAWIVVEVSETSSNSFDNHPNQRTGNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCTECDYSSKTAQNLVKHQVVHRRQNEATEMAASLSPPPDPQFGIFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYIQHLKKHQANAEAQASRRQFEDDTITIDSDTAFDGMVSVSRSGKTLKSSSASASAAAVNGSSVLNYGGAQTSNQDKQSMMLLQKKGILLAPNEEIETLRCQSCPFSTCDKDAMDAHKRRHGIERMTPSCPHCDYIPRKDENIGDHIRLHFTRLYKPESYLIIELLTLTMRKIAANGKEEKQKPTELLFKECTDGRFFPFNETNSTGNPTPCKEKVIVDPNTGETKHHLAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00762862;
- 90% Identity
- iTF_00087584; iTF_00088437;
- 80% Identity
- -