Basic Information

Insect: Nomada fabriciana
Gene Symbol: -
Assembly: GCA_907165295.1
Location: OU015698.1:1557624-1563967[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.9 2.8e+02 2.4 0.3 1 23 82 107 82 107 0.93

2 17 0.24 23 5.8 1.3 2 23 120 141 120 142 0.93

3 17 6.6 6.3e+02 1.3 3.9 1 23 148 170 148 170 0.97

4 17 0.029 2.8 8.7 0.5 2 23 176 197 175 197 0.97

5 17 0.00013 0.013 16.1 1.8 2 23 474 496 473 496 0.96

6 17 1.9 1.8e+02 3.0 1.0 1 23 561 583 561 583 0.82

7 17 0.24 23 5.8 0.4 1 23 793 815 793 815 0.94

8 17 0.0043 0.42 11.3 0.3 1 23 823 845 823 845 0.98

9 17 0.14 13 6.6 1.1 2 23 941 962 940 962 0.95

10 17 0.27 27 5.6 0.7 3 23 974 994 972 994 0.95

11 17 0.0027 0.26 12.0 0.2 1 23 1071 1093 1071 1093 0.98

12 17 0.03 2.9 8.7 0.3 1 23 1167 1189 1167 1189 0.97

13 17 4.3e-05 0.0042 17.6 0.6 1 23 1195 1217 1195 1217 0.97

14 17 0.0045 0.43 11.3 2.6 1 23 1264 1286 1264 1286 0.97

15 17 0.00073 0.07 13.7 1.7 1 23 1292 1314 1292 1314 0.99

16 17 0.059 5.7 7.7 2.0 2 23 1406 1427 1405 1427 0.97

17 17 6.7 6.4e+02 1.3 0.3 2 23 1435 1456 1435 1456 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.9	2.8e+02	2.4	0.3	1	23	82	107	82	107	0.93
2	17	0.24	23	5.8	1.3	2	23	120	141	120	142	0.93
3	17	6.6	6.3e+02	1.3	3.9	1	23	148	170	148	170	0.97
4	17	0.029	2.8	8.7	0.5	2	23	176	197	175	197	0.97
5	17	0.00013	0.013	16.1	1.8	2	23	474	496	473	496	0.96
6	17	1.9	1.8e+02	3.0	1.0	1	23	561	583	561	583	0.82
7	17	0.24	23	5.8	0.4	1	23	793	815	793	815	0.94
8	17	0.0043	0.42	11.3	0.3	1	23	823	845	823	845	0.98
9	17	0.14	13	6.6	1.1	2	23	941	962	940	962	0.95
10	17	0.27	27	5.6	0.7	3	23	974	994	972	994	0.95
11	17	0.0027	0.26	12.0	0.2	1	23	1071	1093	1071	1093	0.98
12	17	0.03	2.9	8.7	0.3	1	23	1167	1189	1167	1189	0.97
13	17	4.3e-05	0.0042	17.6	0.6	1	23	1195	1217	1195	1217	0.97
14	17	0.0045	0.43	11.3	2.6	1	23	1264	1286	1264	1286	0.97
15	17	0.00073	0.07	13.7	1.7	1	23	1292	1314	1292	1314	0.99
16	17	0.059	5.7	7.7	2.0	2	23	1406	1427	1405	1427	0.97
17	17	6.7	6.4e+02	1.3	0.3	2	23	1435	1456	1435	1456	0.79

Sequence Information

Coding Sequence: ATGTCAGGCAGGCTGCCCCGATTGCGTGCACTTCGTCCACGACCCCAGCAACTCAAGCAACTCAAGACCGAGCCGCATAAGGAAGGTAACCTTAAAGAGGACCGACAGGAAGTGGAGATGAGGGAACACGATTCAGAGAGCGACACTGAGGAAATTTCGTACTGTATCAAAGACGATGGACTGATGAAGAATAATTTGAAGCGTGAACACGAGGAACTCGATTCTTCGGGTCCCTCGCATAATTACGAATGCAAAACATGCAAACCATCGAAGGCTCTGCCAAATCTTAAGGCATACCTCGATCACCTGAAAAAAGAGCACAAACAAAAGGGAAAATTTATACGTGATAATGGAAATCGATGTTCTATGTGTTCCTATGTTGCACTAAATTCAAGGGATCTTGAAACTCATCAGAGAGTGCATCATTTAAAGAGGAGATTTTTCCGATGTGTTAAGTGTTCTTATGTAACACATGTACGTGCTCGTTATACAAAGCATGTAAAGTATCACTCGATGCCAATGATAAAGTGCGATGCTTGTGATTTTCGTACACCATATAAGTGGAATTTGGATAGACACACTAGAAATCATGGAGGAGGAGGGGCTTTTCAATGCCGTGCTTGTAATTTCACAGCAGATATTAGACAAAGTTTAACAGTCCATGAAACCAATCACCACGAGCCTCCTGTCGGTCAAACAAACAGGAAAACTAGTGCACCTTTTGAACGTAAACCAAGAAATAGCCCGAAACGTTATAATCAGGTGGGTGCAAGTGACTTTCGTGAATCGTTACACATATCTGGAAGTACATCGCTATCGATTAGCCCTGGAGAATCATTCATTTCTGATCAGTCTATGGAAGATAAAAGAAGTGCAATAGCTAATGCAGAATGTATAGCATTAAAGTGTGAAGAAAAAGGCTGCCAATTTATCACTGCATGGGATTCTGAAATGCAAAGACATTTGGCAGAATGCCATGCTCCAATTGCAGGAAATAAGTCTAGGAAACCACTGCCAATGTTAATTCCTTTGAGTCCTGCTAAACTAAACAATACTAGCTGCAGCGGTTTGTCAACAACGTTGTTAAAAGTTCCGCGCGTCAGGGTAAGACCGGAACTCGCGCAAATCGCAAGAAATACAGAATTGGCCAAGTTGTATGGAAGTAAAGAAGCCAGCAGCTTAAAGAAGGATGCGAATAACGCGGCAGATTTATTTGAAAAAAAAAATGCCTCCTTCTTTGATAAGCTTAAGGAAAAACTTACGACAACAGCGTCAATTAATAACGGAGTGCCGGAGGTAGCTGTAAGTACTACGAACGATTTGCAATGCTGGTGTACTTTTAAAGCTAGTAGCATGGAAGAGCTGGCTTGTCACAAACAAACACACCACACTGCTCTCAGTGTATCTGTGGGTACAACGCGTTGCCCTAAGTGCAGAAGACGTTACAAAAGTTTGACTGATCTACAAGTGCATATGCAGTCTCGTCACTCGACAAGCAATGATACGTCCATACACAATAGCTTAGAAAAATTATCAAATTGTTCAGAACTCCGTGTGACCTCGTATCGCGGTGAATATGCATTCCCAGCGCAAACGGATTGGGACGTTAATCTCAGCGGACTGAATTCTTCTGGATCATCGGTTGAAGGCTCCTCGACGCATCCAAGTGGCCGACGGGTATTCAAATGCCCGCATTGCCCATTTTGGGCATCCACCGCAAGTCGTTTTCATGTTCATATTGTCGGTCATTTAAATCGGAAGCCATTCGAGTGTTCCCTATGCGCGTATCGCTCTAACTGGCGATGGGACATCACAAAACATATTAAACTTAAAGCAGCTAAAGATCCAGTTCATATGACAGCCAGGGTACTTATGACGGATGAAACAGGTCGACGGAATTATTCCAAATATAACAAATATCTTGCACAGGTTGAGCAACAATCGTGGGACGATCAAAATATGGAGGAACGTAGCGTGGAAGAAAGTAATTCCGACGAACCACCAACCAAGTTGTTGATAATGAATAACAGCGATTACTTGGAGAGTCCGGAACTAACGTCTACTCCCGTTTCAATCGTGTCCACGAGTGAAGGAAACCATGATATGAACACCATTAATATTGGACTAAGACCCCCGCCTCCTCTTAAAGCTGCTACTAGAAACAGGGGACAATCTTTACTTAAAAACAATTTGATCTCGCCCCATTCACAGGGTGAACCAAGTGGATCCAATTCTGCTACAATTGCGGACGAAAATAAACGAACTATGTGGAAATGTAAGCGCTGTAACTTTCGACATTCCAATAGAGAAACCGTTTCGTTGCACGTCAGGTCCCACAGTGACACTGATCAGCGGCATGGAGAAGAAAAAGGTGCTTTCAGCTGCGAAGACTGTCCATTTTTTGCATCTGATGCTGCGACTTTATCAATGCACAGAGTTCATCACCGGCCAAACTTGGAGGCAATATTTAAATGTTATCTGTGCCCATATTACGTTAGCACAAAGGCGGAACTTTTGGACCATGTCAGACTTCACGGTGAAGAGCTAGCTGTTGTGCACCAACAAAATATGGATTACAATCTTTCTTCTAAGACGAAAGCGTATTCAACTTTAACCAACGATAGTAATACGAGTCGCATGAAACAAGAGAAGTCTGTAGAACAGGTGATTCACATAACAACGCAAAACAACGTGACTTGCATTACGAGTGCCACGAAGAACTCCAGTGCACCGCCACCGTTACTCTTGGATACTCGAGCACTGCCTGAAGCTCCATTGGTATGGGTATCTCGTCCAGACGGTATACTCGCAAAGATGTTAAAATGTCGTCACTGCCCCTTCGTATCCTCCCGTCGCGCAGAAGTTCGGGACCACGAGACCATGCATCTTGATTCGCCCAGCAATGGTCCAGTGATCGCTTGTACAGATTGCAGTTTTACTTGCAGTCGACGGGAAGTGATGGTTGCACACACAGACATGCATTCCGGTTCTCTGGGCACCGTCCATTGTTTGGTAGATGATTCCAGGCCTGATTCGCAGCAACTGAGCGATTTATCGGCGCTTCTAGGCTTTACACATTCTCCTGTACTCGGCTCCGATCCCGACTTACGAGATTCAAGACTGGTGCATTGTTGCAGCAAATGCCCAGCACGATTTCTCTGCGAGAAGGAATTGAGAATCCATTTAAGATATCATTGCACGGAACTAGCTTATTCTTGCCAATGGTGCTCCTATGCTGCTCGACAGCCGGCACATCTGTTAGCCCATCAAAAAGCGCACTCGACGGAATATCAAGATCGTACCAAGTATTTGTTATCTTTGTACGGTCATTCGCAACGGTATCCACCGCCAACCACTGCTTGTGTTGAAGCAAACAATCAAGACACGAGGGACATAGTACCTACGGTCGCGTGGATTGTAGTAGAGGTTGCGGAGACCTCGAACAACAGTTTTAATAGTATTACAAACAACGGGAATCAGCGATCCGGGAATCAAGTATTCACCTGTGCCAAATGCCCGGCCCGTTACTTTAAATTGGACGCTCTGGAGTATCACATGACATTACACGGATCGAACAATAGATTCAAATGCACCGAGTGCGACTACTCGTCGAAGACCGCACAGAATCTGGTGAAACATCAAGTGGTTCATCGTCGTCAAAATGAAACGAACGAAGTGGCCCCCAATTTATCAACACCGCCTGACCCTCAATTCGGCATTTACATGCGCGGCAATCCGAACTTTGTATATCCTGGTTATTTGAGAAATGGTCGATTGAAAGAAAAGCGATACAAGTGTCACAAATGCCCTTCTGCCTTCGAAAAACGTGAACAGTATAGAGTTCATCTAACGTTGCATGGCGCTAAACAGAGATACCGCTGCGATACTTGTGATTATTCCGTCAAGTATTACGCTAATTATATCCAACACCTGAAGAAACATCAGGCGAATGCCGAGGCACAGGCTTCCCGTAGGCAATTCGAGGACGATACAATTACCATCGACAGTGATACGGTTGCTGATAACATCGTTCCTATTCCTCGTTCGGGAAAGACGCTTAAAGCGTCCAGCAATTCAAGTACAATCGTATCCACTAATGGGATATCGATGCTAAATTATGGTGGAGCGCAAGCCTCGAATCAAGACAAACAATCTTTGATGTTACTTCAGAAGAAAGGATTACTTCTCTCGTCTAACGATGAAGTAGAAACATTACGCTGCCAAAATTGTCCATTTTCTACGTGCGACAAAGACGCAATGGATGCCCATAAACGTCGGCATGGCATTGAAAGGATGACACCTTCTTGCCCGCATTGTGATTACATACCACGAAAAGACGAGAACGTTGGTGAACATATTAGATTACATTTTACAAGGCTCTATAAACCAGAATCCTATCTTATCATAGAATTATTGACTTTGACTATGAGGAAAGTAGCCGCGGATGGAAAGGAAGAGAAACAAAAGGCTGCCGAGTTACTGTTTAAAGAATACGCCGATGGCAGATTCTTTCCACTTACGGATACCAATTCTGTTGGTAGCCCTCCTCCTGTGAATAGCCACAAGGAAAATGTCATAGTAGACCCAAACACCGGAGAAACGAAACATTTAGCTGTTTAA
Protein Sequence: MSGRLPRLRALRPRPQQLKQLKTEPHKEGNLKEDRQEVEMREHDSESDTEEISYCIKDDGLMKNNLKREHEELDSSGPSHNYECKTCKPSKALPNLKAYLDHLKKEHKQKGKFIRDNGNRCSMCSYVALNSRDLETHQRVHHLKRRFFRCVKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHETNHHEPPVGQTNRKTSAPFERKPRNSPKRYNQVGASDFRESLHISGSTSLSISPGESFISDQSMEDKRSAIANAECIALKCEEKGCQFITAWDSEMQRHLAECHAPIAGNKSRKPLPMLIPLSPAKLNNTSCSGLSTTLLKVPRVRVRPELAQIARNTELAKLYGSKEASSLKKDANNAADLFEKKNASFFDKLKEKLTTTASINNGVPEVAVSTTNDLQCWCTFKASSMEELACHKQTHHTALSVSVGTTRCPKCRRRYKSLTDLQVHMQSRHSTSNDTSIHNSLEKLSNCSELRVTSYRGEYAFPAQTDWDVNLSGLNSSGSSVEGSSTHPSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAAKDPVHMTARVLMTDETGRRNYSKYNKYLAQVEQQSWDDQNMEERSVEESNSDEPPTKLLIMNNSDYLESPELTSTPVSIVSTSEGNHDMNTINIGLRPPPPLKAATRNRGQSLLKNNLISPHSQGEPSGSNSATIADENKRTMWKCKRCNFRHSNRETVSLHVRSHSDTDQRHGEEKGAFSCEDCPFFASDAATLSMHRVHHRPNLEAIFKCYLCPYYVSTKAELLDHVRLHGEELAVVHQQNMDYNLSSKTKAYSTLTNDSNTSRMKQEKSVEQVIHITTQNNVTCITSATKNSSAPPPLLLDTRALPEAPLVWVSRPDGILAKMLKCRHCPFVSSRRAEVRDHETMHLDSPSNGPVIACTDCSFTCSRREVMVAHTDMHSGSLGTVHCLVDDSRPDSQQLSDLSALLGFTHSPVLGSDPDLRDSRLVHCCSKCPARFLCEKELRIHLRYHCTELAYSCQWCSYAARQPAHLLAHQKAHSTEYQDRTKYLLSLYGHSQRYPPPTTACVEANNQDTRDIVPTVAWIVVEVAETSNNSFNSITNNGNQRSGNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCTECDYSSKTAQNLVKHQVVHRRQNETNEVAPNLSTPPDPQFGIYMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYIQHLKKHQANAEAQASRRQFEDDTITIDSDTVADNIVPIPRSGKTLKASSNSSTIVSTNGISMLNYGGAQASNQDKQSLMLLQKKGLLLSSNDEVETLRCQNCPFSTCDKDAMDAHKRRHGIERMTPSCPHCDYIPRKDENVGEHIRLHFTRLYKPESYLIIELLTLTMRKVAADGKEEKQKAAELLFKEYADGRFFPLTDTNSVGSPPPVNSHKENVIVDPNTGETKHLAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00762862;
90% Identity: -
80% Identity: -