Amar017395.2
Basic Information
- Insect
- Andrena marginata
- Gene Symbol
- Zfy1
- Assembly
- GCA_963932335.1
- Location
- OZ010664.1:8938173-8945060[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.42 35 5.4 1.3 2 23 117 138 117 139 0.93 2 15 3.8 3.1e+02 2.4 4.8 1 23 145 167 145 167 0.97 3 15 0.038 3.2 8.7 0.5 2 23 173 194 172 194 0.97 4 15 0.0025 0.21 12.4 1.9 2 21 475 494 474 494 0.95 5 15 2.5 2.1e+02 3.0 1.0 1 23 562 584 562 584 0.82 6 15 4.3 3.5e+02 2.2 0.1 3 23 796 816 794 816 0.93 7 15 0.0056 0.46 11.3 0.3 1 23 824 846 824 846 0.98 8 15 0.31 26 5.8 1.2 2 23 964 985 963 985 0.95 9 15 0.081 6.6 7.7 0.4 3 23 997 1017 995 1017 0.95 10 15 0.0035 0.29 11.9 0.2 1 23 1094 1116 1094 1116 0.98 11 15 0.04 3.3 8.6 0.3 1 23 1187 1209 1187 1209 0.97 12 15 5.7e-05 0.0047 17.6 0.6 1 23 1215 1237 1215 1237 0.97 13 15 0.0059 0.49 11.2 2.6 1 23 1284 1306 1284 1306 0.97 14 15 0.00097 0.079 13.7 1.7 1 23 1312 1334 1312 1334 0.99 15 15 0.27 23 6.0 2.0 2 23 1426 1447 1425 1447 0.97
Sequence Information
- Coding Sequence
- ATGTCAGGACGGCTGCCCCGTCTGCGGGCGCTTCGCCCACGACCCCCTCAGACCAAGACGGAGCCGAGGAGAGAAGGTAACCTTAAAGAGGACCgcggggaagccgcgatgaagGGGCATGTGCCACGGGACGACGCCGAGGAGGTGACGGACGGTGCTGACGATGGCTTGGCGAGGGACGAGCCCAAGTGCGAGCCGGACGACCTCCTCGACTGCTCGGGCACCTCGCAGGGATACGAGTGCAAAACGTGCAAACCGTCCAAGCCGATGGCGAGCCTCAAGGCGTACCTCGACCATCTGAAAAAGGAGCACAAACAAAAGGGAAAGTTTGTGCGCGATATTGGAAACAGATGCTCAATGTGTTCTTATGTCGCATTAAGTTCGAGGGATCTTGAGACTCACCAAAGGGTGCACCATTTAAAACGAAGATTCTTTCGCTGCACTAAATGCTCTTACGTAACGCACGTGCGCGCTCGTTACACGAAGCATGTCAAGTATCATTCTATGCCGATGATCAAGTGCGACGCCTGCGACTTCCGTACGCCGTACAAGTGGAATTTGGACAGGCACACTCGGAATCACGGCGGCGGCGGAGCTTTTCAGTGTAGGGCCTGTAATTTCACAGCCGACATTAGGCAGAGCTTGACCGTGCACGAGACCAATCACCACGAACCTCCCGTCGGTCACACCAACCGCAAATCTAGCACACCCTTCGAGCGTAAACCACGAAACAGTCCCAAGCGTTACAATCAGGTGGGTGCGAGCGACTTTAGAGAGGCGCTACACATATCCGGGAGCACGATGGTGTCCCTCAGCTCCGGAGACTCGTTCCTGTCCGACCAGTCGATGAATTCCATAGAAGACAAGAGGAGCGCTATAGCCAACGCAGAGTGTATAGCGTTGAAGTGCGAAGAGAAAGGCTGCCAATTTATCACAGCATGGGACTCTGAAATGCAACGCCACCTAGCAGAGTGCCATGCCCCGGTTACGCCGAACAAATCCAGGAAACCACTGCCAATGTTGATCCCTCTAAGCCCTGCCAAATCGAACAACGCTACCTCCAGTGGTCTCTCCACCACACTGCTAAAAGTTCCGCGGGTTAGGGTAAGGCCGGAACTTGCACAAATCGCGAGAGACACGGAACTAGCGAGGTTGTACGGGAATAAAGAAGGCAGCAATTTAAAGAAGGATGCCGGTAACGCGGCAGAtttgttcgaaaaaaaaaacgcgtccTTCTTTGATAAGCTGAAGGAAAAGCTTACCACGTCGGCGTCGATTAATAACGGAGGTGCGGAGGTGGCTGTAAGTAGTAACCTGAACGATTTGACATGCTGGTGTACGTTTAAAGCTAGTAGCATGGAGGAGCTGGCTTGTCACAAGCGAACGCACCACACTGCTCTCAGTGTATCCGTGGGCACGACGCGTTGCCCGACGTGCAGGAGGCGTTGCAAAAGTTCCACAGATCTGCAAGCGCACATGCAGTGTTGCCGCCCGACGGGCAACGACACGTCCATAGACAGTAGCTTAGAAAAATTAACGGGTTGTTCAGAGCTCCGTGTGACCTCGTATCGCGGTGAATACGCATTCCCAGCGCAAACGGATTGGGACGTTAATCTCGCTGGACTGAATTCCCCTGGATCATCGGTTGAAGGCGCCTCGACGCATCCAAGCGGCCGACGGGTATTCAAATGCCCGCATTGTCCATTTTGGGCGTCCACCGCAAGTCGCTTTCACGTTCATATTGTCGGTCATTTAAATCGGAAGCCATTCGAGTGTTCCCTGTGCGCGTATCGCTCTAACTGGCGATGGGACATCACAAAACATATTAAACTTAAAGCAGCTAAAGATCCAGTTCATATGACCGCCAGGGTACTTATGACGGATGAGACAGGTCGACGGAATTATTCCAAGTATAACAAGTATCTTGCACAGGTCGAGCAACAGTCGTGGGACGATCAGAACATGGAGGAGCATAGCGTGGAGGAGAGCACGTCCGACGAGCCGCCGACAAAGTTGCTAATAATGAACAGCAACGACTATTTGCAGACGCCGGAACTCACGGCTGCGCCTGTTTCGATCACGTCCGCCGGCGACGGGAGCCACGGCGTTAATGCTATCAATATTGGTCTGAGACCGCCGCCTCCTCTCAAAGCTGCCGCTAGAAATCGAGGGCAGTCCTTGCTGAAAAACAATCTGATCTCCCCGAGCGGGCAGAGCGAGGCAGCTGGGTCCGCTTGCGCCGCGAGCACAGAGGAGACCAAGCGCACTATGTGGAAGTGCAAGCGTTGCAACTTCAGACACTCCAACAGGGAAACCGTATCGTTGCACGTGAAGTCTCACAACGAATCGGAACAGCGCTACGTGGATGAAAAAAACCCATTCGGCTGTGGAGACTGTCCGTTCTCCGCCCCCGACGCAGCGACTCTGTCTATGCACAGAGTGCATCATCGCCCCAATTTGGAAGCGATTTTCAAATGCTACCTGTGCCCGTACTACGTCAGTACGAAAGCAGAGCTTCTAGAGCACGTCAGGCTTCACGGAGAGGAACTGGCCGTAGTGCACCAACAGAACATAGACTACAATTTCTCCCCCGCGAAATGTAAAGCTTCCAACAGCGATGGCAGTAAGTTTCTAGAAGATTCTAAATCGAAGTATGTAGCTGACTCTCTTACCGAAGCCTTCTTCGTCGCGCCAGGTAACAGTCGTATGAAGGAAGAGAAGCCTGTGGAGCAGGTGATTCACATCACCACCCAGAACAATGTCAGTTGTATCGCCAACGCCTCGAAGAACTCGAACGCGCCGCCGCCGTTGCTTCTGGACACTCGAGCACTCTCGGAGCCGCCGCTGGTCTGGGTGTCCAGGCCCGACGGCACCCTGGCGAAGATGTTGAAGTGCCGTCACTGCCCCTTCGTGTCGTCGCGGCGCGTCGAAGTCCGCGACCACGAGACTATGCACCTCGACGCCCCTAGCCACGGGCCTGTGATCGCTTGCACGGACTGCAGTTTCACGTGCACGCGCCGTGAGGCGATGGTCGCTCACGCAGACATGCATTCCGGGTCCCTGGGCACCGTCCATTGCTTGGTGGACGACGGGAGGCCAGACTCTCAGCAGCTGAGCGACCTAGCCACGTTCCTCGGCTTCACCCATCCCCCTGTGCTGGGCTCGGAGCCAGACTTGCGGGACTCCAGGCTGGTGCACTGCTGCAGCAAATGCCCGGCGCGGTTCCTCTGCGAGAAAGAGCTGAGGATCCACTTGCGCTACCATTCCACGGAGCTGGCTTACTCCTGCCAGTGGTGTTCGTACGCCGCTCGCCAACCAGCTCACCTCCTCGCTCATCAGAAGGCGCACTCTACCGAGTACCAAGAGCGCACCAAGTATCTTCTGTCTCTGTACGGCTATTCGCAAAGGTATCCGCCTCCTACCACGGCCTGCGTCGAAGCGGGCAGCCACGACGCGGAGAACTCCGCGACCACGGTGGCCTGGATCGTCGTGGAGGTCTCGGAAACCTCGAGCAACAGCTTCGATGGCCACCCGAATCAACGGACCGGGAACCAGGTGTTCACCTGCGCCAAATGCCCGGCCCGTTACTTCAAGCTGGACGCTCTCGAGTACCATATGACCCTGCACGGCTCGAACAATAGATTCAAGTGCACCGAGTGCGATTACTCCTCTAAGACCGCGCAGAATCTGGTGAAGCACCAGGTGGTCCATCGACGACAGAACGAGGCGACCGAGATGGCCGCGAGCCTATCGCCGCCCCCGGATCCCCAGTTCGGCATCTTCATGCGCGGCAATCCGAACTTTGTCTATCCGGGCTACTTGAGGAACGGACGGTTGAAGGAGAAACGGTACAAGTGCCACAAATGTCCCTCCGCGTTCGAGAAGCGGGAACAGTACAGGGTCCATCTGACCCTGCACGGCGCCAAACAGAGATACCGTTGTGACACTTGCGACTATTCCGTCAAGTATTACGCCAACTACATCCAGCACCTGAAGAAGCACCAGGCGAACGCCGAGGCACAGGCCTCGCGCAGGCAGTTCGAGGACGACACGATCACCATCGACAGCGACACGGTGTTCGACGGCATGGTGTCGGTGTCTCGCTCCGGGAAGACGCTGAAATCGCCGAGCGCCTCCGCCTCGGCTGCAGCTGTGAATGGATCCTCGGTGCTGAATTACGGGGGAGCCCAGACCTCGAATCAAGACAAGCAATCCATGATGCTGCTGCAAAAGAAGGGGATACTGTTGGCTCCCAACGAGGAGATAGAGACTTTACGCTGCCAGAGCTGCCCGTTCTCCACCTGCGACAAGGATGCCATGGACGCTCATAAACGTCGCCACGGCATCGAGAGGATGACCCCATCGTGCCCCCATTGCGATTACATACCGAGGAAGGACGAGAATATCGGCGATCACATCAGACTACATTTCACAAGACTCTACAAGCCGGAGTCCTATCTTATCATAGAACTCCTGACACTGACGATGAGGAAGATCGCCGCGAACGGAAAGGAGGAGAAGCAGAAGCCTACGGAGCTGCTGTTTAAAGAATGCACGGACGGAAGGTTCTTTCCGTTCAGCGAAACAAACTCCACTGGCAATCCTTCTCCTTGCAAGGAGAAAGTCATAGTAGATCCAAACACTGGAGAGACGAAGCATCACTTGGCTGTTTAG
- Protein Sequence
- MSGRLPRLRALRPRPPQTKTEPRREGNLKEDRGEAAMKGHVPRDDAEEVTDGADDGLARDEPKCEPDDLLDCSGTSQGYECKTCKPSKPMASLKAYLDHLKKEHKQKGKFVRDIGNRCSMCSYVALSSRDLETHQRVHHLKRRFFRCTKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHETNHHEPPVGHTNRKSSTPFERKPRNSPKRYNQVGASDFREALHISGSTMVSLSSGDSFLSDQSMNSIEDKRSAIANAECIALKCEEKGCQFITAWDSEMQRHLAECHAPVTPNKSRKPLPMLIPLSPAKSNNATSSGLSTTLLKVPRVRVRPELAQIARDTELARLYGNKEGSNLKKDAGNAADLFEKKNASFFDKLKEKLTTSASINNGGAEVAVSSNLNDLTCWCTFKASSMEELACHKRTHHTALSVSVGTTRCPTCRRRCKSSTDLQAHMQCCRPTGNDTSIDSSLEKLTGCSELRVTSYRGEYAFPAQTDWDVNLAGLNSPGSSVEGASTHPSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAAKDPVHMTARVLMTDETGRRNYSKYNKYLAQVEQQSWDDQNMEEHSVEESTSDEPPTKLLIMNSNDYLQTPELTAAPVSITSAGDGSHGVNAINIGLRPPPPLKAAARNRGQSLLKNNLISPSGQSEAAGSACAASTEETKRTMWKCKRCNFRHSNRETVSLHVKSHNESEQRYVDEKNPFGCGDCPFSAPDAATLSMHRVHHRPNLEAIFKCYLCPYYVSTKAELLEHVRLHGEELAVVHQQNIDYNFSPAKCKASNSDGSKFLEDSKSKYVADSLTEAFFVAPGNSRMKEEKPVEQVIHITTQNNVSCIANASKNSNAPPPLLLDTRALSEPPLVWVSRPDGTLAKMLKCRHCPFVSSRRVEVRDHETMHLDAPSHGPVIACTDCSFTCTRREAMVAHADMHSGSLGTVHCLVDDGRPDSQQLSDLATFLGFTHPPVLGSEPDLRDSRLVHCCSKCPARFLCEKELRIHLRYHSTELAYSCQWCSYAARQPAHLLAHQKAHSTEYQERTKYLLSLYGYSQRYPPPTTACVEAGSHDAENSATTVAWIVVEVSETSSNSFDGHPNQRTGNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCTECDYSSKTAQNLVKHQVVHRRQNEATEMAASLSPPPDPQFGIFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYIQHLKKHQANAEAQASRRQFEDDTITIDSDTVFDGMVSVSRSGKTLKSPSASASAAAVNGSSVLNYGGAQTSNQDKQSMMLLQKKGILLAPNEEIETLRCQSCPFSTCDKDAMDAHKRRHGIERMTPSCPHCDYIPRKDENIGDHIRLHFTRLYKPESYLIIELLTLTMRKIAANGKEEKQKPTELLFKECTDGRFFPFSETNSTGNPSPCKEKVIVDPNTGETKHHLAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00762862;
- 90% Identity
- iTF_00084941;
- 80% Identity
- -