Basic Information

Insect: Melipona beecheii
Gene Symbol: -
Assembly: GCA_032399605.1
Location: JAUCMO010000291.1:11308056-11316686[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.28 23 5.8 1.3 2 23 117 138 117 139 0.93

2 16 5.3 4.4e+02 1.8 3.7 1 23 145 167 145 167 0.97

3 16 0.034 2.8 8.7 0.5 2 23 173 194 172 194 0.97

4 16 0.03 2.5 8.9 6.0 2 21 471 490 470 493 0.94

5 16 2.2 1.8e+02 3.0 1.0 1 23 558 580 558 580 0.82

6 16 0.11 8.9 7.1 0.1 1 23 788 810 788 810 0.95

7 16 0.0051 0.42 11.3 0.3 1 23 818 840 818 840 0.98

8 16 0.16 13 6.6 1.1 2 23 938 959 937 959 0.95

9 16 0.34 28 5.6 0.8 3 23 970 990 968 990 0.95

10 16 0.0031 0.26 12.0 0.2 1 23 1067 1089 1067 1089 0.98

11 16 0.035 2.9 8.7 0.3 1 23 1163 1185 1163 1185 0.97

12 16 5e-05 0.0041 17.6 0.6 1 23 1191 1213 1191 1213 0.97

13 16 0.0052 0.43 11.3 2.6 1 23 1261 1283 1261 1283 0.97

14 16 0.00085 0.07 13.7 1.7 1 23 1289 1311 1289 1311 0.99

15 16 1.6 1.3e+02 3.5 3.6 2 23 1403 1424 1402 1424 0.96

16 16 7.7 6.4e+02 1.3 0.3 2 23 1432 1453 1432 1453 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.28	23	5.8	1.3	2	23	117	138	117	139	0.93
2	16	5.3	4.4e+02	1.8	3.7	1	23	145	167	145	167	0.97
3	16	0.034	2.8	8.7	0.5	2	23	173	194	172	194	0.97
4	16	0.03	2.5	8.9	6.0	2	21	471	490	470	493	0.94
5	16	2.2	1.8e+02	3.0	1.0	1	23	558	580	558	580	0.82
6	16	0.11	8.9	7.1	0.1	1	23	788	810	788	810	0.95
7	16	0.0051	0.42	11.3	0.3	1	23	818	840	818	840	0.98
8	16	0.16	13	6.6	1.1	2	23	938	959	937	959	0.95
9	16	0.34	28	5.6	0.8	3	23	970	990	968	990	0.95
10	16	0.0031	0.26	12.0	0.2	1	23	1067	1089	1067	1089	0.98
11	16	0.035	2.9	8.7	0.3	1	23	1163	1185	1163	1185	0.97
12	16	5e-05	0.0041	17.6	0.6	1	23	1191	1213	1191	1213	0.97
13	16	0.0052	0.43	11.3	2.6	1	23	1261	1283	1261	1283	0.97
14	16	0.00085	0.07	13.7	1.7	1	23	1289	1311	1289	1311	0.99
15	16	1.6	1.3e+02	3.5	3.6	2	23	1403	1424	1402	1424	0.96
16	16	7.7	6.4e+02	1.3	0.3	2	23	1432	1453	1432	1453	0.79

Sequence Information

Coding Sequence: ATGTCAGGAAGGCTGCCACGGCTGCGTGCACTTCGTCCGCGACCCCAGCAGTACAAAATCGAGCCGCATAAGGAAGGTAACCTTAAAGAGAGCTGTCAGGAGGCCGCAATGAGAGAGCACGAGTTGCACAGCGATACCGAGGATGTGTCGTATAGTGTCAAAGACGACGGTCTGGTGAAAAACAATCTGAAGCACGAGCACGAGGAGCTCGATTGTTCGGCATCCTCGTCGAATTACGAGTGCAAGATGTGCAAACCTCCGAAGCCTCTGCCGAGCGTGAAAGCGTATCTTGATCATCTGAAGAAAGATCACAAACAGAAGGGGAAATTCACACGCGACATTGGAAACCGATGTTCCATGTGCTCATATGTTGCATTGAACTCGAGGGATCTTGAAACTCATCAAAGAGTACATCATTTAAAGAGAAGGTTTTTCAGGTGTGCTAAGTGTTCATATGTAACACACGTACGTGCTCGTTATACAAAGCACGTGAAGTATCACTCCATGCCAATGATCAAGTGCGATGCCTGTGATTTTCGTACACCGTATAAGtggaATTTAGATAGGCACACTAGAAATCATGGAGGAGGAGGTGCTTTTCAATGTCGTGCTTGTAATTTTACAGCTGATATTAGACAAAGTTTAACAGTACACGAGACTAATCATCATGAACCTCCTGTGAGTCAGACAAACCGCAAGTCTGCTACACCTTTTGAACGTAAACTAAGAAACAGTCCTAAACGTTACAATCAGGTGGGTGCAAGTGATTTTCGGGAATCGCTACATATACCTGGAAGTACAACAGTTTCAATCAGCTCTGGAGATTCGTTTATTTCTGATCAGTCTATGGAAGACAAAAGAAATGCAATAGCTAATGCAGAATGTATAGCGTTGAAGTGCGAGGAGAAAGGATGCCAGTTCATCACTGCATGGGATTCTGAGATGCAGCGACACTTGGCGGAATGTCATGCCCCGATTACATCAAACAAATCTAGAAAACCACTGCCAATGTTAATTCCACTGAGTCCTGTTAAACTGAACAATATGAACTCCGGCGGACCTTCAACGACATTGTTAAAAGTTCCACGTGTCAGAGTAAGACCAGAACTCGCACAAATCGCAAGAGACACCGAACTGGCCAAACTATACGGAAGTAAAGAAGCCAGCAACTTAAAGAAGGATGCGAATAACGCAGcagatttatttgaaaaaaaaaatgcgtcCTTCTTTGATAAGCTTAAGGAAAAGCTTACAACGACAGCGTCAATTAATAACGGAGTACCGGAGGTAGCTGTAAGTACTACGAACGATTTGAAATGCTGGTGTACTTTTAAAGCTAGTAGCATGGAAGAGCTGGCTTGTCACAAACAAATACACCACACTGCTCTCAGTGTATCTATGGGCACAACGCGTTGCCCGAAGTGCAGGAGACGTTGCAAAAGTTCGACTGATCTACAAGTGCATATGCAGTGTTATCACTCGACAAGCAACGATACGTCAATACACAATAGcttagaaaaattatcaaattgttCAGAACTCCGTGTGACCTCGTATCGCGGTGAATATGCATTCCCAGCGCAAATGGATTGGGACGTTAATCTCAGCGGACAGAATTCCTCTGGATCATCGGTTGAAGGTTCCTCGACGCATCCAAGTGGCCGACGGGTATTCAAATGCCCGCATTGTCCATTTTGGGCATCCACCGCAAGTCGTTTTCATGTTCATATTGTCGGTCATTTAAATCGGAAGCCATTCGAGTGTTCTCTATGCGCGTATCGCTCTAACTGGCGGTGGGACATCACAAAACATATTAAACTTAAAGCAGCTAAAGATCCAGTTCATATGACTGCCAGGGTACTTATGACGGATGAAACAGGTCGACGGAATTATtccaaatataacaaatatctTTCACAGGTTGAGCAACAGTCGTGGGACGACCAAAACATAGAGGAACACAGTGTCGAAGAGATGAATTCCTACGAGCCGCCAACCAAATTGTTGATAATGAGTAGCAACGAATGTCTACAAACGTCAGACCTATCGTCGTCTCCCATTTCCATTGTGTCACCAAACGAAGGGAACCATAATATTAACACCATTAATATAGGATTGAAACCGCCGCCGCTTCTCAAAGCTGTTGCGAGAAATCGAGGTCAATCTTtacttaaaaacaatttaatttctcctcACGCGCAATTAAGTGAATCGACAACCACGATCATGGAGGAAAACAAACGCACAATGTGGAAATGCAAACGTTGTAACTTTCGACATTCCAATAGAGAGATTGTCTCCATGCATGTTAAATCTCACAGTGAGCCGGCTGTCCAACGTCCTAGAGAAGACAAAAGTGCATTTAGCTGCGGAGATTGTCCATTTTCCGCATCTGATGCAGCAACGTTGTCTATGCACAGAGTTTATCATCGCCCAAACTTGGAAGCTATctttaaatgttatttgtgTCCGTATTATGTCAGCACAAAAGCAGAACTTTTGGATCACGTCAGACTTCATGGAGAGGAGCTCGCCGTTGCGCACCAACAGGCTGTAGACTATAGTCTCTCTGCCAACCCTAAAACACATCGAGCTTTAAGCACCGATaacaGTACTAATCGCTCGAAGCGAGAAAAGTCTGTGGAGCAAGTGATCCACATAACGACGCAAAACAACGCGACTTGTTTTAGCAACGTTTCGAAGAATTCCGGAgcaccaccgccaccgccattGCTACTCGATACACGTGCACTGCCTGAGGCTCCGTTGGTATGGGTGTCCCGACCAGACGGCACGCTCGCAAAGATGTTGAAATGTCGCCACTGCCCGTTCGTGTCGTCACGACGGGCAGAGGTCCGCGATCACGAAACCATGCACCTCGATTCGCCCAGCGGCCCTGTGATCGCTTGTACGGACTGTAGTTTCACTTGCACGCGGCGAGAGGTCATGGTTGCCCATACGGACATGCATTCCGGGTCCCTGGGCACCATCCATTGTCTAGTAGATGACTCGAGACCAGATTCGCAGCAACTAAACGACTTAACTGCGCTCCTTGGCTTCTCTCATTCCCCGGTGTTAGGCTCGGAGCCAGACTTACGAGACTTAAGACTTGTGTATTGCTGTAGCAAATGTCCAGCGCGGTTTCTCTGCGAGAAGGAGCTGAGAATACATTTAAGATACCACTCTACGGAATTAGCCTATTCTTGTCAATGGTGTTCGTACGCCGCTCGCCAGCCGGCTCACCTTCTAGCTCACCAGAAAGCCCATTCCACGGAGTATCAGGAGCGAACGAAATACTTATTGTCGCTGTACGGCCAGTCGCAGCGATATCCACCACCCACGACGGCCTGCGTCGAACCGAACAATCAAGACTTGAGCAATTCGACGCCCACTGTCGCGTGGATCGTGGTCGAAGTCACCGAAAGCTCGAGCAGCGGTTTCAGCAGCAACGCGAGCAACGCGAGCCAACGAACCGGGAACCAGGTGTTCACCTGCGCCAAATGCCCTGCTCGTTACTTCAAGCTGGACGCACTGGAGTATCACATGACCCTGCATGGGTCGAACAACAGGTTCAAATGCACTGAGTGCGACTACTCGTCGAAAACTGCCCAGAACTTGGTGAAGCATCAGGTGGTTCATCGACGTCAGAATGAGACGGCGAGCGACTTGATCTCGAATCTGTCGCCTCCGCCGGATCCGCAGTTCGGGCTGTTCATGCGTGGGAACCCGAACTTCGTGTATCCTGGCTACCTGAGGAACGGCCgattaaaagagaaacggTACAAATGCCACAAGTGTCCCTCCGCCTTTGAGAAGCGAGAGCAGTATAGAGTTCATTTGACTCTGCACGGCGCCAAGCAGAGATACCGCTGCGACACGTGCGACTACTCGGTCAAGTATTACGCCAATTACATACAACACCTGAAGAAGCATCAGGCGAATGCGGAGGCGCAAGCCTCGCGCAGACAGTTCGAGGACGATACGATTACCATCGACAGCGACAACGTCTCCGACAATACCGGCGCTAATTCACGTTCTGGCAAGACGTTGAAATCGCCCAACAGCTCCACCTCGATCCTCTCACCGAACGGCGTGTCCGTGTTGAATCTCGGCGGAGCTCAAACCTCGAATCAGGACAAGCAGTCGCTCATGCTGCTGCAGAAGAAGGGGATACTTTTGTCCTCGAACGACGAGGTGGAGACGCTGCACTGTCAGAGCTGTCCGTTCTCCACGTGCGACAAGGACGCGATGGATGCCCACAAGCGTCGACACGGCATCGAGAGAATGACCCCGTCCTGTCCTCATTGCGACTACATACCACGAAAGGACGAGAACGTCGGCGAGCACATCAGGCTACATTTCACGAGGCTTTACAAGCCGGAGTCCTATCTCATCATAGAGTTGTTAACGCTCACGATGAGTAAAGTCACCACGAACGGGAAGGAGGAGAAGCAAAAGGCTGCCGAATTACTGTTCAAAGAGTACGCGGATGGAAGATTCTTTCCCTTCGCCGATATCAATTCCTTCGGTGGCTCCTCCGCTGTGAGCAGTTACAAGGAGAAAGTCATCGTGGATCCGAACACGGGGGAGACGAAGCATTTAGCCATTTAG
Protein Sequence: MSGRLPRLRALRPRPQQYKIEPHKEGNLKESCQEAAMREHELHSDTEDVSYSVKDDGLVKNNLKHEHEELDCSASSSNYECKMCKPPKPLPSVKAYLDHLKKDHKQKGKFTRDIGNRCSMCSYVALNSRDLETHQRVHHLKRRFFRCAKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHETNHHEPPVSQTNRKSATPFERKLRNSPKRYNQVGASDFRESLHIPGSTTVSISSGDSFISDQSMEDKRNAIANAECIALKCEEKGCQFITAWDSEMQRHLAECHAPITSNKSRKPLPMLIPLSPVKLNNMNSGGPSTTLLKVPRVRVRPELAQIARDTELAKLYGSKEASNLKKDANNAADLFEKKNASFFDKLKEKLTTTASINNGVPEVAVSTTNDLKCWCTFKASSMEELACHKQIHHTALSVSMGTTRCPKCRRRCKSSTDLQVHMQCYHSTSNDTSIHNSLEKLSNCSELRVTSYRGEYAFPAQMDWDVNLSGQNSSGSSVEGSSTHPSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAAKDPVHMTARVLMTDETGRRNYSKYNKYLSQVEQQSWDDQNIEEHSVEEMNSYEPPTKLLIMSSNECLQTSDLSSSPISIVSPNEGNHNINTINIGLKPPPLLKAVARNRGQSLLKNNLISPHAQLSESTTTIMEENKRTMWKCKRCNFRHSNREIVSMHVKSHSEPAVQRPREDKSAFSCGDCPFSASDAATLSMHRVYHRPNLEAIFKCYLCPYYVSTKAELLDHVRLHGEELAVAHQQAVDYSLSANPKTHRALSTDNSTNRSKREKSVEQVIHITTQNNATCFSNVSKNSGAPPPPPLLLDTRALPEAPLVWVSRPDGTLAKMLKCRHCPFVSSRRAEVRDHETMHLDSPSGPVIACTDCSFTCTRREVMVAHTDMHSGSLGTIHCLVDDSRPDSQQLNDLTALLGFSHSPVLGSEPDLRDLRLVYCCSKCPARFLCEKELRIHLRYHSTELAYSCQWCSYAARQPAHLLAHQKAHSTEYQERTKYLLSLYGQSQRYPPPTTACVEPNNQDLSNSTPTVAWIVVEVTESSSSGFSSNASNASQRTGNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCTECDYSSKTAQNLVKHQVVHRRQNETASDLISNLSPPPDPQFGLFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYIQHLKKHQANAEAQASRRQFEDDTITIDSDNVSDNTGANSRSGKTLKSPNSSTSILSPNGVSVLNLGGAQTSNQDKQSLMLLQKKGILLSSNDEVETLHCQSCPFSTCDKDAMDAHKRRHGIERMTPSCPHCDYIPRKDENVGEHIRLHFTRLYKPESYLIIELLTLTMSKVTTNGKEEKQKAAELLFKEYADGRFFPFADINSFGGSSAVSSYKEKVIVDPNTGETKHLAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00762862;
90% Identity: iTF_00983293;
80% Identity: -