Lcal019192.1
Basic Information
- Insect
- Lasioglossum calceatum
- Gene Symbol
- Zfy1
- Assembly
- GCA_963966675.1
- Location
- OZ016550.1:2016653-2023286[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.012 1.3 10.2 0.8 1 23 114 136 114 137 0.96 2 17 3.7 4e+02 2.4 4.7 1 23 143 165 143 165 0.97 3 17 0.036 3.9 8.7 0.5 2 23 171 192 170 192 0.97 4 17 0.0028 0.3 12.2 3.1 2 21 471 490 470 490 0.95 5 17 2.4 2.6e+02 3.0 1.0 1 23 558 580 558 580 0.82 6 17 2.9 3.2e+02 2.7 0.1 3 23 786 806 784 806 0.93 7 17 0.0053 0.58 11.3 0.3 1 23 814 836 814 836 0.98 8 17 0.06 6.5 8.0 1.0 2 23 932 953 931 953 0.95 9 17 2.1 2.3e+02 3.2 0.8 3 23 965 985 963 985 0.91 10 17 0.63 69 4.8 4.2 1 23 1034 1056 1034 1056 0.96 11 17 0.0033 0.36 12.0 0.2 1 23 1062 1084 1062 1084 0.98 12 17 0.037 4 8.7 0.3 1 23 1154 1176 1154 1176 0.97 13 17 5.3e-05 0.0058 17.6 0.6 1 23 1182 1204 1182 1204 0.97 14 17 0.0055 0.6 11.3 2.6 1 23 1252 1274 1252 1274 0.97 15 17 0.0015 0.17 13.0 1.7 1 23 1280 1302 1280 1302 0.99 16 17 1 1.1e+02 4.2 2.6 2 23 1394 1415 1393 1415 0.97 17 17 7.1 7.8e+02 1.5 0.5 2 23 1423 1444 1423 1444 0.81
Sequence Information
- Coding Sequence
- ATGTCAGGAAGGCTGCCCCGTCTTCGTGCACTTCGTCCGCGACCTCAGCAATCCAAGGAAAAAGAAGGTAACCTTAAAGAAGATCTTAAGGAAACCGCGATGAAGGAGCAACAGTCGCGAACCTCCGCCGAGGAGCTCTCGTTCGAGGACAAAGACGACGATTCCGCAAAGGGCAGTTTAAAGGGCGATGAAGACGACCTCGTTGATTGTACCGGATCCTCGCAGAGCTACGATTGTAAAACCTGCAAACCTCCAAAGCCTCTTCCGATTCTTAAGGCTTACCTCGACCATCTAAAAAAGGAGCACAAACCAAAGGGGAAATTTGCACGCGACGCTGGATACCGATGTTCGATGTGTCCGTATGTTGCATTAAATTCGAGAGACCTCGAAACCCATCAAAGAGTGCATCATTTGAAAAGGAGATTCTTTCGATGTTCCAAATGCTCCTACGTAACGCATGTACGTGCTCGTTACACGAAACACGTGAAGTATCATTCCATGCCAATGATCAAGTGCGACGCCTGTGATTTTCGTACGCCGTATAAGTGGAATTTGGACAGACACACTAGGAACCATGGAGGGGGGGGAGCTTTTCAGTGCCGTGCTTGCAATTTCACGGCTGACATCAGGCAGAGCTTGACAGTGCACGAGACCAATCATCACGAGCCACCCGTAGGGCAGACAAATCGCAAGTCTAATGCACCTTTTGAGCGTAAGCCGAGAAATAGTCCTAAGCGTTACAATCAGGTGGGCGCGAGCGATTTCCGGGATACTCTTCACATATCCGGAAGCACGACGGTGTCCCTCAGTCCCGGCGACTCGTTCATATCCGATCAATCGATGAATTCTATGGAAGATAAAAGAAGTGCGATAGCGAATGCAGAATGCATAGCGTTGAAATGCGAGGAGAAGGGCTGTCAGTTCATTACCGCCTGGGACTCGGAAATGCAGAGACACCTGGCAGAGTGTCATGCACCGGTTACACCGAACAAGTCTCGAAAACCATTGCCAATGTTGATTCCCTTGAGTCCTGCTAAGTCCAATAATACTGCCAGTGGATCCTCCACAACACTGTTAAAAGTTCCACGCGTAAGAGTGCGGCCGGAACTCGCTCAAATTGCCAGAGACACGGAACTGGCTAGGTTGTATGGGAATAAAGAAGTCAACAACTTAAAGAAGGATGCGAATAACGCGGCAGatttgtttgaaaaaaaaaatgcgTCCTTCTTTGATAAGCTAAAGGAAAAGCTTACTACGTCGGCGTCGATAAATAATGGAGTGGCGGAGGTAGCAGTAAGTACCACGAACGATTTGAAATGCTGGTGTACATTTAAAGCTAGTAGCATGGAGGAGCTGGCTTGTCACAAACAAACACACCACACTGCTCTCAGCGTATCTGTGGGCACGACGCGTTGCCCAAAGTGCAGAAGACGTTGCAAAAACTCGACTGATCTACAAACGCATATGCAGTGTTGTCGCTTGGCGAGCAACGATTCGTCCATAGACAGTAGCTTAGAAAAATTATCGAATTGTTCAGAACTACGTGTGACCTCGTATCGCGGTGAATATGCATTCCCAGCGCAAACGGATTGGGACGTAAATCTCAGTGGACTCAATTCTTCTGGATCATCGGTTGAAGGCACCTCAGCGCATCCAAGTGGCCGACGGGTATTCAAATGCCCGCATTGTCCATTTTGGGCATCCACCGCAAGTCGCTTTCACGTTCATATAGTCGGTCATTTAAATCGGAAGCCATTCGAGTGTTCCCTGTGCGCGTACCGCTCTAACTGGCGGTGGGACATCACAAAACATATTAAACTTAAAGCAGCTAAAGATCCAGTTCATATGACTGCCAGGGTACTTATGACGGATGAAACCGGTCGACGGAATTATTCCAAGTATAACAAGTATCTTGCACAGGTGGAGCAACAATCATGGGACGAGCAAAGTATGGAAGAGCGTAGCGTGGAAGAGACTAATTCCGATGAGCCACCGACTAAGTTGTTGATTATGAACAGCAACGAGTATTTGCAAACTCCGGAATATAGCTCCACTCCGGTCTCGATTGTGTCCACAAGCGAAGGGAGTAATGTTAACACTATCAATATTGGTCTAAGACCACCGCCTCCGCTAAAAGCTCGAAATCGTGGTCAATCCTTGCTAAAAAATAACTTGATCTCGCCACACGGACAGAGTGGATCCACTTCCGCTACGCTCTCCGCAGACAATAAACGTACCATGTGGAAATGTAAACGTTGCAACTTTAGACATTCGAATAGAGAGACTGTATCTTTGCATGTCAAGTCCCACAATGAATCGGAGCAACGCAACGAAGACGAAAAAAATCCATTCGGTTGCGGAGATTGCCCATTTTCCGCGCCAGACGCTGCAACTTTGTCCATACATAGAGTCCATCATCGCCCCAACTTGGAAGCCATTTTCAAATGCTATCTGTGCCCCTATTACGTCAGCACGAAAGCGGAACTTTTGGATCATGTTAGACTCCACGGCGAGGAGCTCGCGGTCGTGCACCAACAGAGTACGGACTATAATTTTTCATCGGCTAAATATAAAGGGCAACAGACTGATTCTGATAACAGTAACAGTCGCATGAAACAGGAGAGGTCTATGGAGCAGGTAATCCACATAACCACGCAGAACAACGTGACCTGCATATCGAACGCCTCGAAGAACGCCAACGCACCGCCGCCATTGCTGTTAGATACGCGATCACTGCCAGACGCGCCGTTGGTCTGGGTGTCTAGACCAGACGGCACCCTTGCGAAGATGTTGAAATGTCGTCACTGTCCGTACGTGTCTTCTAGACGCGCGGAGGTCCGTGATCACGAGACCATGCACCTCGACACTCCCAGTCAAGGGCCCGTCATCGCTTGCACGGACTGTAGCTTTACCTGTACCCGTCGAGAAATCATGGTCGCCCACACGGAAATGCATTCCGGGTCGTTGGGTACCGTTCACTGTTTGGTGGACGACACCAGACCCGACTCTCAGCAACTGAGCGACTTGACCACGCTTCTTGGATTTACGCATACTCCCGCACTAGGTTCGGAGCCCGATCTGCGCGACTCCAGGTTGGTGCATTGCTGCAGCAAGTGCCCGGCACGGTTCCTCTACGAGAAGGAACTGAGAATCCACTTGCGGTACCATTCCACGGAGTTGGCGTACTCGTGCCAATGGTGTTCGTACGCCGCTCGCCAGCCGGCTCATCTGTTGGCCCATCAGAAGGCGCACTCGACGGAGTATCAGGAGCGTACGAAGTACTTATTGTCTCTGTACGGTCACTCCCAACGATACCCACCTCCCAACACGGCTTGCGTCGAAGCAGGCGGCCAGGATTCGAGCCAGAGTTGCACGGTTGCGTGGATTGTCGTCGAGGTCTCCGAGACCTCGGGCAACGGTTTCAACAATCCGAATCAACAGAGAACCGGGAATCAAGTGTTCACCTGTGCCAAATGTCCTGCCCGTTACTTTAAGTTAGATGCTCTGGAGTATCACATGACGCTGCACGGATCGAACAAcagattcaaatgcaccgagtGCGACTACTCCTCGAAGACTGCCCAGAATCTGGTGAAACACCAAGTGGTTCACCGACGACAGAACGAGACCAGCGAGATAGCCGCGAATCTGTCGCCGCCGCCCTCCGACCCTCAGTTCGGACTTTTCATGCGAGGCAACCCGAACTTCGTCTATCCTGGTTACCTGAGAAATGGCAGACTGAAAGAGAAACGGTACAAATGCCACAAGTGTCCCTCCGCGTTCGAGAAGCGGGAACAGTATAGGGTTCATCTGACGTTGCATGGCGCGAAACAGAGATACCGTTGCGACACCTGCGACTATTCCGTCAAATACTACGCGAATTACGTTCAGCATCTGAAGAAGCATCAAGCGAACGCGGAGGCTCAAGCCTCGCGCCGGCAATTCGAGGACGACACGATCACCATCGACAGCGACACCGTCTCCGATAACGTGGCGTCCGTGTCCCGTTCGGGGAAGACTCTCAAGTCGTCCTGCAGCTCATCGGCCGCGGTGTCCTTGAACGGGACCGCGATGCTAAACTACGGCGGCATGCAAGCCTCCAACCAAGACAAACAGTCGTTGATACTGATGCAGAAAAAGGGTATGCTCGTGTCGCATAACGAGGAGACTGAGACGTTACGCTGCCAGAGCTGTCCCTTCTCGTCCTGCGATAAAGATGCCATGGACTCCCACAAACGCCGCCACGGTATCGAACGAGTGACACCGTCCTGTCCCCATTGCGATTACAGGCCGAGAAAAGATGAGAATATTGGCGAACATATCAGGCTGCACTTCACTAGACTTTACAAGCCTGAGTCCTATCTAATCATAGAGTTCTTAACGTTAATGATGAAGAAACCATCCAACAATGGAAAGGAGGAGAAACAGAAGTCGACAGAACTATTGTTTAAAGAATATCAAGACGGAAGATTCTTCCCCCTTAACGATACCAATTCGTTCGGCAACAGTCCGAACGGAAATAGCTGTAAGGAGAAAGTTTTGGTGGATCCCAATACCGGAGAGACGAAACATTTGACCGTTTAA
- Protein Sequence
- MSGRLPRLRALRPRPQQSKEKEGNLKEDLKETAMKEQQSRTSAEELSFEDKDDDSAKGSLKGDEDDLVDCTGSSQSYDCKTCKPPKPLPILKAYLDHLKKEHKPKGKFARDAGYRCSMCPYVALNSRDLETHQRVHHLKRRFFRCSKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHETNHHEPPVGQTNRKSNAPFERKPRNSPKRYNQVGASDFRDTLHISGSTTVSLSPGDSFISDQSMNSMEDKRSAIANAECIALKCEEKGCQFITAWDSEMQRHLAECHAPVTPNKSRKPLPMLIPLSPAKSNNTASGSSTTLLKVPRVRVRPELAQIARDTELARLYGNKEVNNLKKDANNAADLFEKKNASFFDKLKEKLTTSASINNGVAEVAVSTTNDLKCWCTFKASSMEELACHKQTHHTALSVSVGTTRCPKCRRRCKNSTDLQTHMQCCRLASNDSSIDSSLEKLSNCSELRVTSYRGEYAFPAQTDWDVNLSGLNSSGSSVEGTSAHPSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAAKDPVHMTARVLMTDETGRRNYSKYNKYLAQVEQQSWDEQSMEERSVEETNSDEPPTKLLIMNSNEYLQTPEYSSTPVSIVSTSEGSNVNTINIGLRPPPPLKARNRGQSLLKNNLISPHGQSGSTSATLSADNKRTMWKCKRCNFRHSNRETVSLHVKSHNESEQRNEDEKNPFGCGDCPFSAPDAATLSIHRVHHRPNLEAIFKCYLCPYYVSTKAELLDHVRLHGEELAVVHQQSTDYNFSSAKYKGQQTDSDNSNSRMKQERSMEQVIHITTQNNVTCISNASKNANAPPPLLLDTRSLPDAPLVWVSRPDGTLAKMLKCRHCPYVSSRRAEVRDHETMHLDTPSQGPVIACTDCSFTCTRREIMVAHTEMHSGSLGTVHCLVDDTRPDSQQLSDLTTLLGFTHTPALGSEPDLRDSRLVHCCSKCPARFLYEKELRIHLRYHSTELAYSCQWCSYAARQPAHLLAHQKAHSTEYQERTKYLLSLYGHSQRYPPPNTACVEAGGQDSSQSCTVAWIVVEVSETSGNGFNNPNQQRTGNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCTECDYSSKTAQNLVKHQVVHRRQNETSEIAANLSPPPSDPQFGLFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYVQHLKKHQANAEAQASRRQFEDDTITIDSDTVSDNVASVSRSGKTLKSSCSSSAAVSLNGTAMLNYGGMQASNQDKQSLILMQKKGMLVSHNEETETLRCQSCPFSSCDKDAMDSHKRRHGIERVTPSCPHCDYRPRKDENIGEHIRLHFTRLYKPESYLIIEFLTLMMKKPSNNGKEEKQKSTELLFKEYQDGRFFPLNDTNSFGNSPNGNSCKEKVLVDPNTGETKHLTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00762862;
- 90% Identity
- iTF_00867042; iTF_00862883; iTF_00865606; iTF_00863568; iTF_00862181;
- 80% Identity
- -