Apur013077.1
Basic Information
- Insect
- Augochlora pura
- Gene Symbol
- Zfy1
- Assembly
- GCA_028453695.1
- Location
- CM052108.1:11331399-11337893[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 5.4 3.8e+02 1.7 0.3 1 23 80 105 80 105 0.90 2 17 0.25 18 5.9 0.8 2 23 118 139 118 140 0.92 3 17 5 3.5e+02 1.8 3.7 1 23 146 168 146 168 0.97 4 17 0.032 2.2 8.7 0.5 2 23 174 195 173 195 0.97 5 17 0.0014 0.1 13.0 2.3 2 21 474 493 473 493 0.95 6 17 2.1 1.5e+02 3.0 1.0 1 23 561 583 561 583 0.82 7 17 1.6 1.2e+02 3.3 0.1 3 23 791 811 789 811 0.95 8 17 0.0048 0.34 11.3 0.3 1 23 819 841 819 841 0.98 9 17 0.053 3.8 8.0 1.0 2 23 937 958 936 958 0.95 10 17 1.8 1.3e+02 3.2 0.8 3 23 970 990 968 990 0.91 11 17 0.0029 0.21 12.0 0.2 1 23 1067 1089 1067 1089 0.98 12 17 0.033 2.3 8.7 0.3 1 23 1163 1185 1163 1185 0.97 13 17 4.7e-05 0.0033 17.6 0.6 1 23 1191 1213 1191 1213 0.97 14 17 0.0049 0.35 11.3 2.6 1 23 1261 1283 1261 1283 0.97 15 17 0.0008 0.056 13.7 1.7 1 23 1289 1311 1289 1311 0.99 16 17 0.56 40 4.8 2.8 2 23 1403 1424 1402 1424 0.97 17 17 6.3 4.5e+02 1.5 0.5 2 23 1432 1453 1432 1453 0.81
Sequence Information
- Coding Sequence
- ATGTCAGGAAGGCTGCCCCGTCTGCGTGCACTTCGGCCACGACCCCAGCAGTCCAAGAACGAGCCGCAGAAGGAAGGTAACCTTAAAGAAGACCACAAGGAGGTCGCGATGAAGGAACAAGAATCGCGGACGAGCTCCGAGGAGCTTTCGTTCGAAGATAAAGACGATGGTTCCGCGAAGGACAGTTTAAAGGGCGAGCACGACGAGCTTCTCGACTGTACGGTGCCCTCGCAGAGTTACGAGTGCAAAACTTGCAAACCGTCGAAGCCTCTTCCGAGTCTTAAGGCTTATCTCGATCATCTGAAAAAGGAGCACAAACAAAAGGGAAAGTTTGTACGCGATGCTGGAAATAGATGTTCAATGTGTCCATATATTGCTTTAAACTCAAGGGACCTTGAAACCCACCAAAGAGTGCATCATTTAAAAAGGAGATTTTTTCGATGCGCTAAATGCTCTTATGTAACACATGTGCGTGCTCGTTATACAAAACATGTGAAGTATCATTCTATGCCAATGATTAAGTGTGATGCCTGTGATTTTCGTACGCCATACAAGTGGAATTTAGACAGACACACCAGGAACCATGGTGGAGGTGGAGCTTTTCAATGCAGAGCCTGTAATTTCACAGCTGATATCAGACAGAGCTTGACAGTGCACGAGACCAATCACCATGAGCCACCTGTAGGGCAGACTAATCGCAAGTCTAATGCACCCTTTGAGCGTAAGCCGAGAAATAGTCCTAAGCGTTATAATCAGGTTGGCGCGAGTGACTTCCGGGAAACGCTTCATATTTCCGGAAGCACGACAGTATCCTTAAGTCCTGGTGACTCGTTTCTGTCCGATCAGTCGATGAATTCCGTAGAAGATAAAAGAAGTGCAATAGCCAATGCAGAGTGCATAGCACTGAAATGCGAAGAGAAGGGGTGCCAGTTCATTACCGCGTGGGATTCCGAAATGCAGAGACACTTAGCAGAATGTCACGCGCCAGTTACACCGAATAAGTCTAGGAAACCATTGCCAATGTTAATTCCGTTAAGTCCTGTTAAATCCAATAGTACTGCCGGTGGATCCTCCACGACATTGTTAAAAGTTCCGAGAGTAAGAGTGCGACCGGAACTCGCTCAAATTGCCAGAGACACAGAACTGGCTAGGTTGTATGGAAATAAAGAAGTCAACAACTTAAAGAAGGATGCGAATAACGCAGCAGATTTGTTTGAAAAAAAAAATGCGTCCTTCTTTGATAAGCTAAAGGAAAAACTTACTACATCGGCATCAATAAATAACGGAGTGGCGGAGGTAGCAGTAAGTACCACGAACGATTTGAAATGCTGGTGTACATTTAAAGCTAGTAGCATGGAGGAGCTGGCTTGTCACAAACAAACACACCACACTGCTCTCAGTGTATCTGTGGGCACGACGCGTTGCCCAAAGTGCAGAAGACGTTGCAAAAGCTCGACTGATCTACAAGCGCATATGCAGTGTTGTCGCTCGACGAATAACGATGCGTCCATAGACAGTAGCTTAGAAAAATTATCGAATTGTTCAGAACTACGTGTGACCTCGTATCGCGGTGAATATGCATTCCCAGCGCAAACGGATTGGGACGTAAATCTCAGTGGACTCAATTCTTCTGGATCATCGGTTGAAGGCACCTCAGCGCATCCAAGTGGCCGACGGGTATTCAAATGCCCGCATTGTCCATTTTGGGCATCCACCGCAAGTCGCTTTCACGTTCATATAGTCGGTCATTTAAATCGGAAGCCATTCGAGTGTTCCCTGTGCGCATACCGCTCTAACTGGCGGTGGGACATCACAAAACATATTAAACTTAAAGCAGCTAAAGATCCAGTTCATATGACTGCCAGGGTACTTATGACGGATGAAACCGGTCGACGGAATTATTCCAAGTATAACAAGTATCTTGCACAGGTGGAACAACAATCATGGGACGAGCAAAATATGGAAGAGCGTAGCGTAGAAGAGTCTAATTCCGATGAGCCACCGACTAAGTTATTGATTATGAATAGTAACGAGTATTTGCAAACGCCGGAATTTAGTTCTACTCCGGTTTCGATTGTATCAACGAACGAAGGAAGTAATGTTAATACTATCAATATTGGCCTAAGACCACCGCCACCGTTAAAAGCTGCCGCTAGAAATCGAGGTCAATCCTTGCTAAAAAATAATTTAATCACGCCACACGGACAGAGTGGATCCACTTCCGCTACGCTCTCCGATGACAATAAACGCACCATGTGGAAATGCAAACGTTGCAACTTTAGACATTCAAATAGAGAAACTGTATCGTTGCACGTAAAATCGCATAGCGAATTAGAGCAACGCAATGAAGACGAGAAAAATCCATTCGGTTGTGGAGACTGCCCATTTTCAGCGCCAGACGCTGCAACTTTGTCCATGCATAGAATTCATCATCGCCCCAATTTGGAAGCTATTTTTAAATGCTACCTATGCCCTTATTATGTCAGCACGAAAGCAGAACTTCTGGATCACGTTAGGCTTCACGGCGAGGAGCTTGCGGTGGTGCACCAACAGAGTACGGATTATAATTTTTCACCGGTTAAATATAAAGCGCAACAGGCTAATTCCGATAACAATACCAGTCGCATGAAACAGGAGAAGTCTATAGAACAGGTGATTCACATCACTACACAGAATAACGTGACTTGTATATCAAACGCTTCGAAGAACGCTAATGCGCCGCCGCCACTTCTGTTGGATACTCGAGCACTGCCAGACGCGCCATTGGTCTGGGTGTCTAGACTAGACGGCACCCTCGCGAAGATGTTGAAGTGTCGTCATTGCCCATACGTGTCATCTAGACGTGCAGAGGTTCGGGATCACGAGACCATGCATTTGGATACACCCAGTCAGGGGCCCGTTATCGCTTGCACAGACTGTAGTTTCACCTGTACCCGTCGGGAAATCATGGTCGCACACACGGAAATGCATTCGGGGTCATTGGGTACCGTTCACTGCTTGGTAGATGACTCCAGACCCGATTCTCAGCAACTGAATGACTTGACCACACTTCTTGGATTTACACACACCCCTGTGTTAGGTTCGGAGCCGGATCTGCGTGACTCCAGATTGGTGCATTGTTGTAGCAAATGTCCAGCGCGGTTCCTCTGCGAAAAAGAACTGAGGATCCATTTACGGTACCATTCCACAGAGCTGGCGTATTCGTGTCAATGGTGCTCGTACGCCGCTCGTCAGCCGGCTCACCTATTGGCCCATCAAAAGGCGCACTCCACAGAGTATCAGGAGCGTACAAAGTATTTATTGTCTCTGTACGGTCACTCACAAAGATACCCTCCTCCTACCACGGCTTGCGTCGAAGCGGGTGGTCAGGATTCAAGCAATCCAACGTCTACAGTCGCGTGGATCGTCGTCGAAATCTCAGAAACCTCGAGTAATAATTTTAACAATATTAGCAACACAAATCAACCGAGAACTGGGAACCAAGTGTTCACCTGTGCCAAATGTCCTGCCCGTTACTTTAAGTTGGATGCTTTGGAGTATCACATGACCCTGCACGGATCAAACAATAGATTCAAGTGCACTGAATGCGACTATTCCTCGAAGACTGCTCAGAACCTAGTGAAGCACCAGGTAGTTCATAGACGACAAAACGAGACTAACGAGATAGCTGCGAATCTGTCACCGCCACCTTCCGATCCTCAATTTGGATTGTACATGCGAGGTAACCCGAACTTTGTTTATCCTGGTTATTTGAGAAATGGTAGATTGAAAGAGAAACGATACAAATGTCACAAGTGTCCATCCGCGTTCGAGAAGCGGGAACAATACAGGGTTCACCTGACGTTGCATGGCGCGAAACAAAGATACCGTTGCGACACGTGCGATTACTCTGTCAAGTACTATGCGAATTATATCCAGCATTTGAAGAAACACCAGGCAAACGCTGAAGCTCAAGCTTCTCGTAGACAATTCGAGGACGACACGATTATCATTGATAGCGACACTGTTTCTGATAATGTAGCATCCGTGTCCCGTTCTGGGAAGACTCTTAAGTCATCTTGCAGCTCATCCGGCACGATGGCGTTGAACGGGGCAACGATATTAAACTATGGTGGTATGCAAGCCTCCAACCAGGATAGACAATCATTGATATTAATGCAAAAGAAAGGCATGCTCGTTTCGCATAACGAAGAAGCGGATACCCTTCGCTGCCAGAGCTGTCCCTTCTCGACTTGCGATAAAGACGCTATGGACTCCCACAAACGTCGCCACGGTATAGAACGAGTGACACCGTCCTGTCCCCATTGCGATTATAGACCAAGAAAGGATGAAAATATTGGCGAACATATCAGGCTGCACTTTACTAGACTTTATAAGCCTGAATCCTATCTAATCATAGAGTTCTTAACGTTAACGATGAAGAAACTATCCAACAGTGGAAAGGAGGAGAAACAGAAGTCGCCAGAACTATTATTCAAAGAATATCAAGACGGAAGATTCTTCCCCCTTAGCGATACTAATTCATTCGGCAACAGTTCGACCGTAAATAGCTGTAAGGAGAAAGTTTTAGTGGATCCGAATACTGGAGAGACGAAACATTTGACCGTTTAA
- Protein Sequence
- MSGRLPRLRALRPRPQQSKNEPQKEGNLKEDHKEVAMKEQESRTSSEELSFEDKDDGSAKDSLKGEHDELLDCTVPSQSYECKTCKPSKPLPSLKAYLDHLKKEHKQKGKFVRDAGNRCSMCPYIALNSRDLETHQRVHHLKRRFFRCAKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHETNHHEPPVGQTNRKSNAPFERKPRNSPKRYNQVGASDFRETLHISGSTTVSLSPGDSFLSDQSMNSVEDKRSAIANAECIALKCEEKGCQFITAWDSEMQRHLAECHAPVTPNKSRKPLPMLIPLSPVKSNSTAGGSSTTLLKVPRVRVRPELAQIARDTELARLYGNKEVNNLKKDANNAADLFEKKNASFFDKLKEKLTTSASINNGVAEVAVSTTNDLKCWCTFKASSMEELACHKQTHHTALSVSVGTTRCPKCRRRCKSSTDLQAHMQCCRSTNNDASIDSSLEKLSNCSELRVTSYRGEYAFPAQTDWDVNLSGLNSSGSSVEGTSAHPSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAAKDPVHMTARVLMTDETGRRNYSKYNKYLAQVEQQSWDEQNMEERSVEESNSDEPPTKLLIMNSNEYLQTPEFSSTPVSIVSTNEGSNVNTINIGLRPPPPLKAAARNRGQSLLKNNLITPHGQSGSTSATLSDDNKRTMWKCKRCNFRHSNRETVSLHVKSHSELEQRNEDEKNPFGCGDCPFSAPDAATLSMHRIHHRPNLEAIFKCYLCPYYVSTKAELLDHVRLHGEELAVVHQQSTDYNFSPVKYKAQQANSDNNTSRMKQEKSIEQVIHITTQNNVTCISNASKNANAPPPLLLDTRALPDAPLVWVSRLDGTLAKMLKCRHCPYVSSRRAEVRDHETMHLDTPSQGPVIACTDCSFTCTRREIMVAHTEMHSGSLGTVHCLVDDSRPDSQQLNDLTTLLGFTHTPVLGSEPDLRDSRLVHCCSKCPARFLCEKELRIHLRYHSTELAYSCQWCSYAARQPAHLLAHQKAHSTEYQERTKYLLSLYGHSQRYPPPTTACVEAGGQDSSNPTSTVAWIVVEISETSSNNFNNISNTNQPRTGNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCTECDYSSKTAQNLVKHQVVHRRQNETNEIAANLSPPPSDPQFGLYMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYIQHLKKHQANAEAQASRRQFEDDTIIIDSDTVSDNVASVSRSGKTLKSSCSSSGTMALNGATILNYGGMQASNQDRQSLILMQKKGMLVSHNEEADTLRCQSCPFSTCDKDAMDSHKRRHGIERVTPSCPHCDYRPRKDENIGEHIRLHFTRLYKPESYLIIEFLTLTMKKLSNSGKEEKQKSPELLFKEYQDGRFFPLSDTNSFGNSSTVNSCKEKVLVDPNTGETKHLTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00762862;
- 90% Identity
- iTF_00966313;
- 80% Identity
- -