Lleu001168.1
Basic Information
- Insect
- Lasioglossum leucozonium
- Gene Symbol
- Zfy1
- Assembly
- GCA_028454225.1
- Location
- CM052207.1:1746408-1753149[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.012 0.88 10.2 0.8 1 23 114 136 114 137 0.96 2 17 3.7 2.6e+02 2.4 4.7 1 23 143 165 143 165 0.97 3 17 0.036 2.5 8.7 0.5 2 23 171 192 170 192 0.97 4 17 0.0028 0.2 12.2 3.1 2 21 471 490 470 490 0.95 5 17 2.4 1.7e+02 3.0 1.0 1 23 558 580 558 580 0.82 6 17 3 2.1e+02 2.7 0.1 3 23 788 808 786 808 0.93 7 17 0.0054 0.38 11.3 0.3 1 23 816 838 816 838 0.98 8 17 0.06 4.3 8.0 1.0 2 23 934 955 933 955 0.95 9 17 2.1 1.5e+02 3.2 0.8 3 23 967 987 965 987 0.91 10 17 0.64 45 4.8 4.2 1 23 1036 1058 1036 1058 0.96 11 17 0.0033 0.24 12.0 0.2 1 23 1064 1086 1064 1086 0.98 12 17 0.037 2.6 8.7 0.3 1 23 1156 1178 1156 1178 0.97 13 17 5.4e-05 0.0038 17.6 0.6 1 23 1184 1206 1184 1206 0.97 14 17 0.0055 0.39 11.3 2.6 1 23 1254 1276 1254 1276 0.97 15 17 0.0009 0.064 13.8 1.7 1 23 1282 1304 1282 1304 0.99 16 17 0.64 45 4.8 2.8 2 23 1396 1417 1395 1417 0.97 17 17 7.2 5.1e+02 1.5 0.5 2 23 1425 1446 1425 1446 0.81
Sequence Information
- Coding Sequence
- ATGTCAGGAAGGCTGCCCCGTCTGCGAGCACTTCGTCCGCGACCTCAGCAATCCAAGGAAAAAGAAGGTAACCTTAAAGAAGATCTTAAGGAAACCGAGATGAAGGAGCAACAGTCGCGAACCTCCGCCGAGGAGCTTTCGTTCGAAGACAAAGACGACGATTCCGCGAAGGACAGTTTAAAGGGCGAGCAAGACGATCTCGTCGACTGTACCGGGTCCTCGCAGAGCTACGAATGTAAAACCTGCAAACCTCCGAAGCCTCTTCCGATTCTTAAGGCTTACCTCGACCATCTGAAAAAGGAGCACAAGCCAAAGGGGAAATTTGCACGCGATGCTGGATATCGATGTTCGATGTGTCCGTATGTTGCATTAAATTCGAGAGACCTCGAAACCCACCAAAGAGTGCATCATTTAAAAAGGAGATTCTTTCGATGTTCCAAATGCTCCTATGTAACGCATGTACGTGCTCGTTACACAAAACACGTCAAGTATCATTCCATGCCAATGATCAAGTGCGACGCCTGTGATTTTCGTACGCCGTACAAGTGGAATTTGGACAGGCACACTAGGAACCATGGCGGGGGGGGAGCTTTTCAGTGTCGTGCTTGCAATTTCACAGCTGACATCAGGCAAAGCTTGACGGTGCACGAGACCAATCATCACGAGCCACCCGTAGGACAGACAAATCGCAAATCTAATGCACCTTTTGAGCGTAAGCCGAGAAATAGTCCTAAGCGTTACAATCAGGTGGGCGCGAGCGATTTCCGGGATACGCTTCACATATCCGGAAGCACAACCGTGTCCCTCAGCCCTGGCGACTCGTTCATGTCCGATCAATCGATGAATTCCATGGAAGATAAAAGAAGTGCAATAGCGAATGCAGAATGCATAGCATTGAAATGCGAGGAGAAGGGCTGCCAGTTCATTACCGCATGGGACTCTGAAATGCAGAGACACCTGGCAGAGTGTCATGCGCCGGTTACACCGAACAAGTCTCGAAAACCATTGCCAATGTTGATTCCCTTGAGTCCGGCTAAATCCAATAATACTGCCAGTGGATCCTCCACAACACTGTTAAAAGTTCCACGTGTAAGAGTGCGGCCGGAACTAGCTCAAATTGCCAGAGACACGGAACTGGCTAGGTTGTATGGGAATAAAGAAGTCAACAACTTAAAGAAGGATGCGAATAACGCGGCAGATTTGTTTGAAAAAAAAAATGCGTCCTTCTTTGATAAGCTAAAGGAAAAGCTTACTACGTCGGCGTCGATAAATAATGGAGTGGCGGAGGTAGCAGTAAGTACCACGAACGATTTGAAATGCTGGTGTACATTTAAAGCTAGTAGCATGGAGGAGCTGGATTGTCACAAACAAACACACCACACTGCTCTCAGCGTATCTGTGGGCACGACGCGTTGCCCAAAGTGCAGAAGACGTTGCAAAAACTCGACTGATCTACAAACGCATATGCAGTGTTGTCGCTTGGCGAGCAACAATTCGTCCATAGACAGTAGCTTAGAAAAATTATCGAATTGTTCAGAACTACGTGTGACCTCGTATCGCGGTGAATATGCATTCCCAGCGCAAACGGATTGGGACGTAAATCTCAGTGGACTCAATTCTTCTGGATCATCGGTTGAAGGCACCTCAGCGCATCCAAGTGGCCGACGGGTATTCAAATGCCCGCATTGTCCATTTTGGGCATCCACCGCAAGTCGCTTTCACGTTCATATAGTCGGTCATTTAAATCGGAAGCCATTCGAGTGTTCCCTGTGCGCGTACCGCTCTAACTGGCGGTGGGACATCACAAAACATATTAAACTTAAAGCAGCTAAAGATCCAGTTCATATGACTGCCAGGGTACTTATGACGGATGAAACCGGTCGACGGAATTATTCCAAGTATAACAAGTATCTTGCACAGGTGGAGCAACAATCATGGGACGAGCAAAATATGGAGGAGCGTAGCGTGGAAGAGACTAATTCCGATGAGCCACCGACTAAGTTGTTGATTATGAACAGCAACGAGTATTTGCAATCTCCGGAATATAGTTCCACTCCGGTCTCAATTGTGTCCACAAGCGAAGGAAGTAATGTTAACACTATCAATATTGGCCTAAGACCACCGCCTCCGCTAAAAGCTGCTGCTCGAAATCGTGGTCAATCCTTGCTAAAAAATAACTTGATCTCGCCACACGGACAGAGTGGATCTACTTCCGCTACGCTCTCCTCAGACAATAAACGTACCATGTGGAAATGTAAACGTTGCAACTTCAGACATTCGAACAGAGAGACCGTATCTTCGCATGTCAAGTCCCACAATGAATCGGAGCAACGCAACGAAGACGAAAAAAATCCATTCGGTTGCGGAGATTGCCCATTTTCCGCGCCAGATGCTGCAACTTTGTCCATACATAGAGTCCATCATCGCCCTAACTTAGAAGCCATTTTCAAATGCTATCTGTGCCCCTATTACGTCAGCACGAAAGCGGAACTTTTGGATCATGTTAGACTCCATGGCGAGGAGCTTGCAGTCGTGCACCAACAGAGTACAGACTATAATTATTCGTCTGTTAAATACAAAGGGCAACAGACTAATTCCGATAACAGTACCAGTCGCATGAAACAGGAGAGGTCTATGGAGCAGGTGATCCACATAACCACGCAGAACAACGTGACCTGCATATCGAACGCCTCGAAGAACGCCAATGCACCGCCGCCATTGCTGTTGGATACGCGATCACTGCCAGACGCGCCGTTGGTCTGGGTGTCTAGACTAGACGGCACCCTCGCGAAGATGTTGAAATGTCGTCATTGTCCGTACGTGTCGTCTAGACGCGCGGAGGTCCGTGATCACGAGACCATGCACCTCGACACTCCCAGTCAAGGGCCGGTTATTGCTTGCACGGACTGTAGCTTTACCTGTACCCGTCGAGAAATCATGGTCGCCCACACGGAAATGCATTCCGGGTCGTTGGGCACGGTTCACTGTTTGGTGGACGACACTAGACCCGACTCTCAGCAACTGAGCGACCTGACCACGCTTCTTGGATTCACGCATACTCCCGCATTAGGTTCGGAGCCTGATCTGCGGGACTCCAGATTAGTGCATTGTTGCAGCAAATGCCCTGCACGGTTCCTCTACGAGAAAGAACTGAGAATCCATTTGCGATACCATTCCACGGAGTTAGCGTACTCGTGCCAATGGTGTTCTTACGCCGCTCGCCAGCCGGCTCATCTATTGGCTCATCAGAAGGCACACTCAACAGAGTATCAAGAGCGTACGAAGTACTTATTGTCTCTGTACGGTCACTCTCAACGATACCCACCTCCCAACACGGCTTGCGTCGAAGCAGGCGGCCAGGATTCGAGTCAGAGTTGCACGGTCGCGTGGATTGTCGTCGAGGTCTCCGAAACCTCGGGCAATGGCTTTAACAATCCGAATCAACAGAGGACCGGGAACCAAGTGTTCACCTGTGCCAAATGTCCCGCCCGTTACTTTAAGTTAGATGCTCTTGAGTACCACATGACACTGCACGGATCGAACAACAGATTCAAGTGCACCGAATGCGACTATTCCTCGAAGACTGCCCAGAATCTGGTGAAACACCAAGTGGTTCACCGACGACAAAACGAGACTGGCGAGATAGCCGCGAATCTGTCGCCGCCGCCTTCCGACCCTCAGTTTGGACTGTTCATGCGAGGCAACCCGAACTTCGTCTATCCTGGTTACCTGAGAAACGGAAGACTGAAAGAAAAACGATACAAATGCCACAAGTGTCCCTCCGCGTTCGAGAAGCGGGAGCAGTACAGGGTTCATTTGACGTTACATGGCGCGAAACAGAGATACCGTTGCGACACCTGCGACTATTCCGTCAAATACTACGCGAATTACATTCAGCATCTGAAAAAGCACCAAGCGAACGCGGAGGCTCAAGCCTCGCGCCGGCAATTCGAGGACGATACGATCACCATCGACAGCGACACCGTCTCCGACAACGTGGCGTCCGTGTCCCGTTCGGGGAAGACTCTCAAGTCGTCCTGCAGCTCGTCGGCCGCGGTGTCCTTGAATGGCACTGCGATGCTAAACTACGGCGGCATGCAAGCCTCTAACCAGGACAAACAGTCGTTGATACTGATGCAGAAAAAGGGTATGCTCGTGTCGCATAACGAGGAGACTGAGACGTTACGCTGCCAGAGCTGTCCCTTCTCGACTTGCGACAAAGATGCTATGGACTCCCATAAACGTCGCCACGGTATAGAACGAGTAACACCGTCCTGCCCCCATTGCGATTACAGACCGAGAAAAGATGAGAATATTGGCGAACATATTAGGCTCCACTTTACTAGACTTTACAAGCCTGAGTCCTATCTAATCATAGAGTTCTTAACGTTAACGATGAAGAAACCATCTAACAATGAAAAGGAGGAGAAACAGAAGTCGACGGAACTATTGTTTAAAGAATATCAAGACGGAAGATTCTTCCCCCTTAATGATACTAATTCGTTCGGTAACAGTTCGACCGGAAATAGTTGTAAGGAGAAAGTTTTAGTGGATCCCAATACCGGAGAGACGAAACATTTGACCGTTTAA
- Protein Sequence
- MSGRLPRLRALRPRPQQSKEKEGNLKEDLKETEMKEQQSRTSAEELSFEDKDDDSAKDSLKGEQDDLVDCTGSSQSYECKTCKPPKPLPILKAYLDHLKKEHKPKGKFARDAGYRCSMCPYVALNSRDLETHQRVHHLKRRFFRCSKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHETNHHEPPVGQTNRKSNAPFERKPRNSPKRYNQVGASDFRDTLHISGSTTVSLSPGDSFMSDQSMNSMEDKRSAIANAECIALKCEEKGCQFITAWDSEMQRHLAECHAPVTPNKSRKPLPMLIPLSPAKSNNTASGSSTTLLKVPRVRVRPELAQIARDTELARLYGNKEVNNLKKDANNAADLFEKKNASFFDKLKEKLTTSASINNGVAEVAVSTTNDLKCWCTFKASSMEELDCHKQTHHTALSVSVGTTRCPKCRRRCKNSTDLQTHMQCCRLASNNSSIDSSLEKLSNCSELRVTSYRGEYAFPAQTDWDVNLSGLNSSGSSVEGTSAHPSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAAKDPVHMTARVLMTDETGRRNYSKYNKYLAQVEQQSWDEQNMEERSVEETNSDEPPTKLLIMNSNEYLQSPEYSSTPVSIVSTSEGSNVNTINIGLRPPPPLKAAARNRGQSLLKNNLISPHGQSGSTSATLSSDNKRTMWKCKRCNFRHSNRETVSSHVKSHNESEQRNEDEKNPFGCGDCPFSAPDAATLSIHRVHHRPNLEAIFKCYLCPYYVSTKAELLDHVRLHGEELAVVHQQSTDYNYSSVKYKGQQTNSDNSTSRMKQERSMEQVIHITTQNNVTCISNASKNANAPPPLLLDTRSLPDAPLVWVSRLDGTLAKMLKCRHCPYVSSRRAEVRDHETMHLDTPSQGPVIACTDCSFTCTRREIMVAHTEMHSGSLGTVHCLVDDTRPDSQQLSDLTTLLGFTHTPALGSEPDLRDSRLVHCCSKCPARFLYEKELRIHLRYHSTELAYSCQWCSYAARQPAHLLAHQKAHSTEYQERTKYLLSLYGHSQRYPPPNTACVEAGGQDSSQSCTVAWIVVEVSETSGNGFNNPNQQRTGNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCTECDYSSKTAQNLVKHQVVHRRQNETGEIAANLSPPPSDPQFGLFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYIQHLKKHQANAEAQASRRQFEDDTITIDSDTVSDNVASVSRSGKTLKSSCSSSAAVSLNGTAMLNYGGMQASNQDKQSLILMQKKGMLVSHNEETETLRCQSCPFSTCDKDAMDSHKRRHGIERVTPSCPHCDYRPRKDENIGEHIRLHFTRLYKPESYLIIEFLTLTMKKPSNNEKEEKQKSTELLFKEYQDGRFFPLNDTNSFGNSSTGNSCKEKVLVDPNTGETKHLTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00762862;
- 90% Identity
- iTF_00861512;
- 80% Identity
- -