Basic Information

Insect: Megachile ligniseca
Gene Symbol: -
Assembly: GCA_945859565.1
Location: CAMAOB010000096.1:29288-35732[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 4.5 4.6e+02 1.9 0.5 1 23 79 104 79 104 0.92

2 17 0.0021 0.22 12.4 1.7 2 23 117 138 117 139 0.95

3 17 5 5.1e+02 1.8 3.7 1 23 145 167 145 167 0.97

4 17 0.032 3.3 8.7 0.5 2 23 173 194 172 194 0.97

5 17 0.18 18 6.3 8.5 2 21 471 490 470 493 0.94

6 17 2.1 2.1e+02 3.0 1.0 1 23 558 580 558 580 0.82

7 17 0.054 5.5 8.0 0.2 1 23 790 812 790 812 0.94

8 17 0.0047 0.49 11.3 0.3 1 23 820 842 820 842 0.98

9 17 0.15 15 6.6 3.1 2 23 938 959 937 959 0.95

10 17 0.091 9.4 7.3 0.5 3 23 971 991 969 991 0.96

11 17 0.0029 0.3 12.0 0.2 1 23 1068 1090 1068 1090 0.98

12 17 0.078 8 7.5 0.3 1 23 1164 1186 1164 1186 0.97

13 17 4.7e-05 0.0049 17.6 0.6 1 23 1192 1214 1192 1214 0.97

14 17 0.0049 0.5 11.3 2.6 1 23 1270 1292 1270 1292 0.97

15 17 0.00079 0.082 13.7 1.7 1 23 1298 1320 1298 1320 0.99

16 17 0.23 23 6.0 2.0 2 23 1412 1433 1411 1433 0.97

17 17 7.2 7.5e+02 1.3 0.3 2 23 1441 1462 1441 1462 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	4.5	4.6e+02	1.9	0.5	1	23	79	104	79	104	0.92
2	17	0.0021	0.22	12.4	1.7	2	23	117	138	117	139	0.95
3	17	5	5.1e+02	1.8	3.7	1	23	145	167	145	167	0.97
4	17	0.032	3.3	8.7	0.5	2	23	173	194	172	194	0.97
5	17	0.18	18	6.3	8.5	2	21	471	490	470	493	0.94
6	17	2.1	2.1e+02	3.0	1.0	1	23	558	580	558	580	0.82
7	17	0.054	5.5	8.0	0.2	1	23	790	812	790	812	0.94
8	17	0.0047	0.49	11.3	0.3	1	23	820	842	820	842	0.98
9	17	0.15	15	6.6	3.1	2	23	938	959	937	959	0.95
10	17	0.091	9.4	7.3	0.5	3	23	971	991	969	991	0.96
11	17	0.0029	0.3	12.0	0.2	1	23	1068	1090	1068	1090	0.98
12	17	0.078	8	7.5	0.3	1	23	1164	1186	1164	1186	0.97
13	17	4.7e-05	0.0049	17.6	0.6	1	23	1192	1214	1192	1214	0.97
14	17	0.0049	0.5	11.3	2.6	1	23	1270	1292	1270	1292	0.97
15	17	0.00079	0.082	13.7	1.7	1	23	1298	1320	1298	1320	0.99
16	17	0.23	23	6.0	2.0	2	23	1412	1433	1411	1433	0.97
17	17	7.2	7.5e+02	1.3	0.3	2	23	1441	1462	1441	1462	0.79

Sequence Information

Coding Sequence: ATGTCAGGAAGGCTACCTCGATTGCGTGCACTTCGTCCGCGGCCTCAACAATCGAAAACTGAACTGCACAAGGAAAGTAACCTTAAAGAGGCTAGACAGGAAGTCGCGATGAGGGAACATGAGTTACGGGACAATAGCGAAGAAATTTCATACGACGTTAAAGACAATAACTCTATGAGGAACAATTTGAAACGTGAACACGAGGCATTCGATTGTTCAGGAACTTCTCAAAATTACGAATGCAAAACTTGTAAACCTCCAAAGTCTCTCTCCAGTCTTAAAGTGTATCTCGATCATTTGAAAAAAGAACATAAACAAAAGGGAAAATTTATACGTGATAGTGGAAATCGATGTTCCATGTGTTCGTACGTTTCAATAAATTCAAGGGATCTTGAAACTCACCAGAGAGTTCATCATTTGAAAAGAAGATTCTTTAGATGCGCCAAATGTTCTTATGTAACCCACGTACGTGCTCGTTACACGAAGCATGTAAAATACCATTCTATGCCGATGATTAAATGTGATGCTTGTGATTTTCGTACGCCATACAAGTGGAATTTGGACAGGCACACCAGGAATCACGGAGGAGGAGGAGCTTTCCAATGCCGTGCTTGCAATTTTACGGCTGATATTAGGCAGAGTTTAACAGTACACGAAACAAATCATCATGAACCTCCTGTGAGTCAAACAAACCGCAAATCTAATGCACCTTATGAGCGTAAACCAAGAAATAGTCCTAAGCGTTACAATCAGGTGGGTGCAAGTGATTTTCGGGATTCGTTACGAATATCTGGAAGTACAACTGTATCAATTAGTCCTGGAGATTCATATGTTTCCGATCAATCTCTAGAAGATAAAAGAAACGCGATGGCCAGTGCCGAATGTATAGCGTTAAAATGCGAAGAAAAAGGGTGTCAATTTATTACAGCATGGGATTCTGAAATGCAACGACATTTGGCAGAATGTCATGCTCCAGTTACACCAAATAAATCTAAAAAGCCACTGCCAATGTTAATTCCTTTAAGTCCTGCTAAATCTAGTAGCTGCAGTACCAGTGGATCTTCAACGACATTATTAAAAGTTCCGCGAGTGAGGGTAAGACCGGAACTTGCACAAATCGCAAGAGATACGGAACTAGCAAAATTATACGGAAATAAAGAAGTCAGAAATTTAAAGAAGGATGCAAATAATGCGGCAGATTTATTTGAAAAAAAAAATGCGTCCTTCTTTGATAAGCTAAAGGAAAAGCTTACAACGTCGGCGTCAATTAATAATGGAGTACCAGAGGTAGCTGTAAGTACTACGAACGATTTGAAATGCTGGTGTACTTTTAAAGCTAGTAGCATGGAAGAGCTGGCTTGTCACAAACAAACACACCACACCGCTCTCAGTGTATCTGTGGGTACAACGCGTTGTCCCAAGTGCAGAAGACGTTGCAAAAGTTCGACTGATCTACAAGTGCATATGCAGTGTTGTCACTCGACAAGCAACAATACGTCCATTCACAATAGCTTAGAAAAATTATCAAATTGTTCAGAACTCCGTGTGACCTCGTATCGCGGTGAATATGCATTACCTGCGCAAACGGATTGGGACATTAATCTCAGCGGACTGAATTCTTCTGGATCATCGGTTGAAGGCTCCTCGACGCATCCATGTGGCCGACGGGTATTTAAATGCCCGCACTGTCCATTTTGGGCATCCACCGCAAGTCGTTTTCATGTTCATATTGTCGGTCATTTAAATCGGAAGCCATTCGAGTGTTCCCTATGCGCGTATCGCTCTAACTGGCGATGGGACATCACAAAACATATTAAACTTAAAGCAGCTAAAGATCCAGTTCATATGACTGCCACGGTACTTATGACGGATGAAACAGGTCGACGGAATTATTCCAAATATAACAAATACCTTGCACAGGTCGAGCAACAGTCGTGGGACGATCAAACCATGGAAGAACGTAATACAGAAGACACACAATCTGACGAGCCACCGACTAAGTTGTTAATAATGAACACCAATGAATATCTGCAAACATCAGAACTTACGTCTACTCCCGTTTCAATTATGTCTGCAAGCGATGCAAGTCATAACGTTAACGCTATTAATGCCGCACTAAGACCACCTCCACCTCTTAAAGCTGCTGCTAGAAATCGTGGGCAATCGTTGCTTAAAAATAATTTGATTTCTACAAATGCACAAAGTGGAGCAGGCACATCTACCTCTACTACGGTCACGGAAGAGAATAAACGCACCATGTGGAAGTGTAAGCGTTGTAATTTCCGACATTCCAATAGAGAAACCGTATCGTTGCACGTTAAGTCCCACAATGAATCAGAACAACGTTACGAAGAAGAAAAGAATGCATTTAATTGCGGAGATTGTCCATACTCTGCATCCGACGCCGCTAGTTTATCGATGCACAGAGTTCATCATCGTCCAAATTTGGAAGCAATTTTCAAATGTTATTTATGTCCATATTATGTTAGCACAAAAGCAGAGCTTTTGGATCATGTTAGACTTCACGGAGAAGAACTTGCTGTCGTACATCAGCAAAACATGGATTATAATTTTTCACCTACTAAATCTAAAACACAAGCTTTAGGTATCGATAATAATACAAATCGCACAAAAGCGGAAAAGTGTGTCGAACAGGTTATACATATAACAACGCAAAACAACGTGACCTGTGTCAGCGGTGCCTCAAAAAGTTCCAGTGCACCGCCACCGTTACTACTGGACACTCGAGCGTTGCCCGAAGCTCCATTAGTGTGGGTGTCTCGACCGGATGGTACGCTTACAAAGATGTTAAAATGTCGCCACTGCCCGTTCGTGTGTTCGCGACGTGCCGAAGTCCGGGATCATGAAACCATGCATCTCGATTCTCCAAGCAGTGGTCCCGTGATCGCTTGTACGGATTGTAGTTTCACTTGTACTCGAAGAGAAGTGATGGTTGCCCACATAGACATGCATTCCGGTTCTCTAGGTACCGTTCATTGTTTAGTAGACGATTCTAGGCCAGATTCGCAGCAATTAATCGATTTGACCGCACTTCTCGGATTTACGCATTCCCCTGTATTGGGTTCAGAGCCTGATCTACGAGACTCGAGACTCGTGCATTGCTGCAGTAAATGCCCAGCACGATTTCTCTGTGAGAAAGAACTGAGGATTCATTTGCGATATCATTCCACGGAATTGGCTTATTCCTGCCAATGGTGTTCTTACGCTGCTCGACAGCCGGCTCACCTGTTAGCTCATCAGAAAGCGCACTCCACCGAGTATCAAGAACGTACTAAATATTTGTTGTCTTTGTACGGTCATTCGCAACGATACCCACCTCCTACTACAGCTTGCGTCGAAACAAATGGCCAGGGTGCAAATAATTCGACGCCTACCGTCGCGTGGATCGTTGTTGAAATTACCGAAAGTTCAAGTAACAGTTTCAATGATAGCACGAACAACACGAATCAACGAACCGGAAATCAAGTGTTCACCTGTGCCAAATGTCCGGCCCGTTATTTCAAGATGGATGCTTTGGAATATCATATGACATTGCACGGCTCGAACAACAGATTCAAGTGTACCGAATGCGATTACTCGTCGAAAACTGCTCAGAATCTGGTAAAACATCAGGTGGTTCATCGTCGTCAAAATGAAACGGGTGAAACGACTTCGAATTTATCGACGTCATTGCCGCCGCAGCCGCCTCCGCCTCCGCCTGATCCCCAATTCGGAATCTTTATGCGTGGCAATCCAAATTTCGTATATCCTGGTTATCTAAGGAATGGCCGTTTGAAAGAGAAACGATACAAATGTCATAAATGTCCCTCGGCCTTCGAAAAACGTGAACAATACAGAGTACATTTAACGTTACACGGAGCGAAACAGAGATATCGTTGCGACACTTGCGACTACTCCGTTAAATATTATGCTAATTATATACAACATCTGAAGAAACATCAAGCGAACGCTGAAGCGCAAGCCTCGCGTAGACAATTCGAAGATGATACGATTACCATCGATAGCGATACGATTTCTGACAACAGAGAAACTGTATCCCGTTCAGGAAAGACTCTAAAATCGTCGAGTAATTCGTCCGCATCGGTGTCCACGAATGGCATATCGATATTGAATTATGGCGGAGTTCAAGCATCGAATCAAGACAAACAGTCCTTAATGTTGTTGCAGAAGAAAGGTATACTCGTGTCTTCCAACGACGAAGTCGAAACGTTACGCTGCCAGAGCTGCCCATTTTCTACCTGTGACAAAGACGCGATGGATGCTCATAAGCGTCGTCACGGTATCGAAAGAATGACTCCATCCTGTCCCCATTGCGATTACATCCCTCGAAAAGACGAGAACGTCGGAGAGCACATAAGACTACATTTCACAAGACTTTATAAACCGGAATCCTATCTTATAATAGAACTTCTAACTTTAACCATGAAAAAGATAGCTTCGAACGGAAAGGAAGAGAAGCAGAAGGCTGCCGAGTTACTTTTTAAAGAGTATGCGGACGGAAGATTTTTTCCATTCGCTGACACCAATTCTTTTGGTAGTCCCTCGACCGTCAACAGCCACAAGGAGAAAGTTATAGTAGATCCAAATACTGGAGAAACGAAACATCGTTTTGCCGTTTAA
Protein Sequence: MSGRLPRLRALRPRPQQSKTELHKESNLKEARQEVAMREHELRDNSEEISYDVKDNNSMRNNLKREHEAFDCSGTSQNYECKTCKPPKSLSSLKVYLDHLKKEHKQKGKFIRDSGNRCSMCSYVSINSRDLETHQRVHHLKRRFFRCAKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHETNHHEPPVSQTNRKSNAPYERKPRNSPKRYNQVGASDFRDSLRISGSTTVSISPGDSYVSDQSLEDKRNAMASAECIALKCEEKGCQFITAWDSEMQRHLAECHAPVTPNKSKKPLPMLIPLSPAKSSSCSTSGSSTTLLKVPRVRVRPELAQIARDTELAKLYGNKEVRNLKKDANNAADLFEKKNASFFDKLKEKLTTSASINNGVPEVAVSTTNDLKCWCTFKASSMEELACHKQTHHTALSVSVGTTRCPKCRRRCKSSTDLQVHMQCCHSTSNNTSIHNSLEKLSNCSELRVTSYRGEYALPAQTDWDINLSGLNSSGSSVEGSSTHPCGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAAKDPVHMTATVLMTDETGRRNYSKYNKYLAQVEQQSWDDQTMEERNTEDTQSDEPPTKLLIMNTNEYLQTSELTSTPVSIMSASDASHNVNAINAALRPPPPLKAAARNRGQSLLKNNLISTNAQSGAGTSTSTTVTEENKRTMWKCKRCNFRHSNRETVSLHVKSHNESEQRYEEEKNAFNCGDCPYSASDAASLSMHRVHHRPNLEAIFKCYLCPYYVSTKAELLDHVRLHGEELAVVHQQNMDYNFSPTKSKTQALGIDNNTNRTKAEKCVEQVIHITTQNNVTCVSGASKSSSAPPPLLLDTRALPEAPLVWVSRPDGTLTKMLKCRHCPFVCSRRAEVRDHETMHLDSPSSGPVIACTDCSFTCTRREVMVAHIDMHSGSLGTVHCLVDDSRPDSQQLIDLTALLGFTHSPVLGSEPDLRDSRLVHCCSKCPARFLCEKELRIHLRYHSTELAYSCQWCSYAARQPAHLLAHQKAHSTEYQERTKYLLSLYGHSQRYPPPTTACVETNGQGANNSTPTVAWIVVEITESSSNSFNDSTNNTNQRTGNQVFTCAKCPARYFKMDALEYHMTLHGSNNRFKCTECDYSSKTAQNLVKHQVVHRRQNETGETTSNLSTSLPPQPPPPPPDPQFGIFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYIQHLKKHQANAEAQASRRQFEDDTITIDSDTISDNRETVSRSGKTLKSSSNSSASVSTNGISILNYGGVQASNQDKQSLMLLQKKGILVSSNDEVETLRCQSCPFSTCDKDAMDAHKRRHGIERMTPSCPHCDYIPRKDENVGEHIRLHFTRLYKPESYLIIELLTLTMKKIASNGKEEKQKAAELLFKEYADGRFFPFADTNSFGSPSTVNSHKEKVIVDPNTGETKHRFAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00762862;
90% Identity: iTF_00964118; iTF_00962818; iTF_00962124; iTF_00964752;
80% Identity: -