Epro031080.1
Basic Information
- Insect
- Eudemis profundana
- Gene Symbol
- -
- Assembly
- GCA_947034915.1
- Location
- CAMQQJ010000347.1:363895-373582[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.4e-11 5.6e-08 33.6 0.0 4 39 172 208 169 212 0.89 2 4 7.7e-13 6.8e-10 39.8 0.3 2 39 224 261 223 264 0.93 3 4 5.6e-15 4.9e-12 46.6 0.1 2 45 279 323 278 323 0.96 4 4 3.9e-18 3.5e-15 56.7 0.0 1 43 330 373 330 375 0.95
Sequence Information
- Coding Sequence
- ATGCCCGGCCGCGGTCCCCCGCAGGTCAAGCACGAACCGGCCTCCGAAGACGACGACAGCAGCTCGCAGTTCGCGCACGGCTTCCTCTCCAACCAGATCCCGTCGCTGGAGCTGCGGACGGTGAAGCTCGAGGCCATAGACGACAATGCGTCTGCGCACCTCTTGTGCCACCTGCAGGGTTCAGAGGGCCTGGAGGAGTTGGCGCCGCCGGCGCCTGCGGGTCCGGCCGCTACGCCCGTCTGCATCAAACAAGAGCCCGCCGAGCCCGCCGTCACGCTGGAGACGCTCGCGCCGGCGCCGCACTCCGACACTCTGGGTTCCATGCTCATAGACCGACACAAGACACTGCCAGGTGCGAACGACGCTGACTCCATGGATTTTATGCCCCTCCTCGCTGTTAAGGACGAACCTTTGTCAGAAGGAGAGCAACACCACCTGAGCGGGTCAGACACGAGCGACTCCAGCAGCCACCCCGAGCCTCCCCGCGGCAGCCCCAAGAACTGGACACAGCAGGACATGGAGCTGGCCCTCGAGGCGCTCCGGACACACAACATGAGCCTCACTAAGGCGTCAGCAACATACGGTATCCCGTCGACGACGCTGTGGCAGCGCGCGCACCGGCTGGGCATTGACACGCCAAAGAAGGAGGGCGCGTCTAAGTCGTGGAGTGAGGCCGACctgcgcgccgcgctgcacgcgCTCCGCTCCGGCGCCATCTCCGCCAACAAGGCCAGTAAGGCTTACGGTATCCCTAGCAGCACGCTATACAAGATAGCGCGGCGCGAGGGCATCCGGCTGGCGGCGCCCTTCAACGCCGCGCCCACGGCCTGGCGCCGCGCCGACCTCGAGCGCGCGCTCGCCTCCATCCGCACAGGCGCTTCCTCCGTGCAGCGCGCCGCCTCTCAGTTCGGGATACCCACAGGTACGCTATACGGGCGGTGTAAGAGAGAAGGCATCGAGCTGTCGCGGTCCAACCCAACGCCGTGGTCTGAGGACGCCATGGGAGAGGCTTTGGAAGCTGTCAGGGTGGGTCAGATGTCCATAAACCAAGCAGCGATCCACTACAACCTGCCTTATTCGTCGCTCTACGGACGGTTTAAGAGGTGTAAATATCAAAGTCCACAAGCGATTCCCCAACAGCCAATGCCAGAGGGTATGGAGATGGAGGCAAGCCAGCACATGTACTACCAGCAGCAGATGCCGGCCATGCCAGAGGAGCACCCTTACCATCAGAGCTACCTGGCCGAACCGGGGGACATGCATTCCAGCATGCTACAGGACCAAAGCTACGGGATGTACTACCAAGGTAAGTTCCTAGATAAGTATAAGTCCACTTTAATACACAACACTGAGGAGACGTCTAGAGTCTTCGATGCGAGACAATAG
- Protein Sequence
- MPGRGPPQVKHEPASEDDDSSSQFAHGFLSNQIPSLELRTVKLEAIDDNASAHLLCHLQGSEGLEELAPPAPAGPAATPVCIKQEPAEPAVTLETLAPAPHSDTLGSMLIDRHKTLPGANDADSMDFMPLLAVKDEPLSEGEQHHLSGSDTSDSSSHPEPPRGSPKNWTQQDMELALEALRTHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLRAALHALRSGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALASIRTGASSVQRAASQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQSPQAIPQQPMPEGMEMEASQHMYYQQQMPAMPEEHPYHQSYLAEPGDMHSSMLQDQSYGMYYQGKFLDKYKSTLIHNTEETSRVFDARQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01463177; iTF_01133642; iTF_00021260; iTF_00462313; iTF_01135683; iTF_00156175; iTF_01134710; iTF_00342135; iTF_00325304; iTF_00155228; iTF_00289548; iTF_01072365; iTF_00656011; iTF_00657063; iTF_00659381; iTF_00411346; iTF_00871218; iTF_00412441; iTF_00409204; iTF_00148406; iTF_00149299; iTF_00772798;
- 90% Identity
- iTF_00148406; iTF_00149299;
- 80% Identity
- -