Ahon019400.1
Basic Information
- Insect
- Adoxophyes honmai
- Gene Symbol
- -
- Assembly
- GCA_005406045.1
- Location
- BHDV01026120.1:150083-156047[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.1 1.3e+03 -0.6 0.0 29 37 99 108 99 110 0.88 2 5 1.3e-11 1.6e-08 34.3 0.0 4 39 165 201 162 205 0.89 3 5 2.1e-12 2.5e-09 36.9 0.1 2 39 217 254 216 257 0.93 4 5 1.1e-15 1.3e-12 47.4 0.0 2 45 272 316 271 316 0.96 5 5 7.1e-18 8.6e-15 54.4 0.0 1 43 323 366 323 368 0.95
Sequence Information
- Coding Sequence
- ATGCCCGGCCGCGGCGGCCCgccggtcaagtgcgagccggCCTCCGACGACGACGACTCCCAGTTCGCCCACAGCTTCCTCTCCAATCAGATTCCATCGCTAGAACTTCGGGCGGTTAAACTCGAGCCGGACATAGACGACAATGCGTCCGCACACATCCTGCACCACTTGCAGGGATCCGAAGGATTGGAGGAGCTGGCGCCACCAGCGCCGACGGGTCCCACTGCCACCCCAGTCAGTGTTAAACAGGAGCCCGCAGAGCCAGCCGTCACGCTCGAGACCcttgcgcccgcgccgcactCAACACTTATTGACAGACACAAGACGCTGCCGGGAGCAAATGATGCCGATTCCATGGATTTCATGCCACTTTTGGCTGTCAAAGACGAGCCCCTATCAGAAGGAGAGCAACATCACCTAAGCGGTTCGGACACGAGCGACTCCAGCACGCAGCCCGAGCTGACGCGGAGCCCCAAGAACTGGACGCAGCAGGACATGCAGCTGGCTCTGGAGGCCCTGCGGAAACACAACATGAGCCTTACTAAGGCGTCAGCAACGTATGGTATTCCGTCCACCACGCTCTGGCAGCGCGCTCACCGGCTCGGCATCGACACCCCGAAGAAGGAAGGGGCTTCTAAATCCTGGAGCGAGACTGATCTGCGGGGAGCGCTGAATGCCCTGCGTTCCGGGGCCATATCTGCTAACAAGGCTAGCAAAGCTTATGGCATTCCAAGCAGCACCCTCTACAAGATAGCCCGCCGCGAGGGCATCCGGCTGGCGGCGCCGTTCAACGCCGCGCCGACGGCCTGGCGCCGCGCCGACCTGGAGCGCGCGCTCGCCGCCATCCGCGCCGGCGCCTGCTCCGTGCAGCGCGCCGCCACGCAGTTCGGGATACCTACTGGCACGCTATACGGACGGTGTAAGCGGGAAGGCATAGAGTTATCGCGGTCCAACCCCACGCCGTGGTCTGAAGACGCCATGGGAGAAGCATTAGAAGCAGTCAGAATCGGCCAGATGTCAATAAATCAAGCCGCTATTCATTACAATTTGCCTTACTCTTCACTCTATGGACGTTTCAAGAGATGCAAATATCAGAGTCCTCAAGCTTTACCCCAAGCAATACCAGAAAACTTGGAGATGGATCCTCAATCGCAATCCCAGGAGATGTACTACCAGCACCAAACACCAATCGCCCCAAGTCTACACCCAGACCAGGACCTCCAGAATCCCTACCTCCAGCAGAACTATACGATGAGTGACCCAGGGTTCGAAGCCATGCACAGCAGCATGCTGGTCGATCAAGGGTATGGGATGTACTACCAGGGATGCAGTAGTATTGCCACGAGTTGA
- Protein Sequence
- MPGRGGPPVKCEPASDDDDSQFAHSFLSNQIPSLELRAVKLEPDIDDNASAHILHHLQGSEGLEELAPPAPTGPTATPVSVKQEPAEPAVTLETLAPAPHSTLIDRHKTLPGANDADSMDFMPLLAVKDEPLSEGEQHHLSGSDTSDSSTQPELTRSPKNWTQQDMQLALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSETDLRGALNALRSGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALAAIRAGACSVQRAATQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKYQSPQALPQAIPENLEMDPQSQSQEMYYQHQTPIAPSLHPDQDLQNPYLQQNYTMSDPGFEAMHSSMLVDQGYGMYYQGCSSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00680441;
- 90% Identity
- iTF_00325304;
- 80% Identity
- -