Dang015456.1
Basic Information
- Insect
- Ditula angustiorana
- Gene Symbol
- -
- Assembly
- GCA_963691745.1
- Location
- OY829484.1:660556-667694[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-11 2.3e-08 34.3 0.0 4 39 171 207 168 211 0.89 2 4 3e-12 3.7e-09 36.8 0.1 2 39 223 260 222 263 0.93 3 4 1.1e-15 1.4e-12 47.8 0.1 2 45 278 322 277 322 0.96 4 4 1.9e-18 2.3e-15 56.7 0.0 1 43 329 372 329 374 0.95
Sequence Information
- Coding Sequence
- ATGCCCGGCCGCGGCGTCTTGCAGGTCAAGTGCGAGCCGGCCTCCGACGACGACTGTGATTCCCAGTTTGCTCACAGCTTCCTCTCCAATCAGATACCATCGCTCGAACTTCGGCCAGTGAAGCTAGAGCCCGAAATAGACGACAATGCGTCTGCGCACATCCTGCGCCATTTGCAGGGTTCGGAAAGCCTGGAGGAGCTGgcgccgccggcgccgtcgGGCCCAACTGCCACGCCGGTCAGCGTGAAGCAGGAGCCCGCTGAGCCTGCCGTGATGCTGGAAACACTGGAGCCAGCCCCGCATAGCGACACACAGGGCGCTACACTAATTGACAGACACAAGACGCTACCAGGTGCGAATGACGCTGACTCCATGGATTTCATGCCGCTCCTGGCTGTCAAAGATGAGCCTTTATCAGAAGGAGaGCAACATCACCTTAGTGGGTCAGACACTAGCGATTCGAGCACGCAGCCGGAGCTGACGCGCAGCCCCAAGAACTGGACACAGCAAGACATGCAGCTTGCTCTTGAAGCTCTGCGGAAGCACAACATGAGCCTTACTAAGGCATCAGCTACATACGGGATTCCTTCGACGACTCTTTGGCAGCGCGCGCACCGGCTCGGCATCGACACTCCGAAGAAGGAAGGCGCTTCGAAGTCCTGGAGCGAAACAGACTTGAGGGGAGCTCTAAACGCGCTTCGTTCTGGAGCCATATCAGCTAACAAGGCTAGCAAAGCGTACGGCATCCCGAGCAGCACGCTGTATAAGATCGCGCGGCGCGAGGGCATCCGGCTGGCGGCGCCCTTCAACGCCGCGCCCACCGCCTGGCGCCGCGCCGACCTCgagcgcgcgctcgccgccatCCGTGCCGGCGCCTGCTCCGTGCAGCGTGCCGCCAGCCAGTTCGGCATCCCCACCGGTACACTATATGGACGATGCAAGCGGGAAGGCATCGAGCTATCGCGGTCGAATCCCACGCCGTGGTCTGAAGATGCCATGGGGGAAGCATTGGAAGCTGTCAGAGTTGGTCAGATGTCAATAAACCAAGCAGCGATCCACTACAACTTACCCTACTCGTCTCTTTATGGGCGGTTCAAGAGATGCAAATATCAAAGTCCGCAAGCAATTCCCCAGCAAAGCATGCCTGAAAACATGGAAATGGAGCCGCAATCTCAATCGCACGAGATGTACTACCAGCATCAGAATGTGCTGCCGGTCAACCAGAGCTTGCACCACCCTGATCAAGATCTCCAAAGCCCTTACCTTCAGCAGAACTATGTTATGAGCGATCCGGGGTTCGAAGCGATGCACAGTAGTATGCTGACGGAGCAGTACGGGATGTATTACCAGGGCTGCAGTAGTATCGCGACCAGTTGA
- Protein Sequence
- MPGRGVLQVKCEPASDDDCDSQFAHSFLSNQIPSLELRPVKLEPEIDDNASAHILRHLQGSESLEELAPPAPSGPTATPVSVKQEPAEPAVMLETLEPAPHSDTQGATLIDRHKTLPGANDADSMDFMPLLAVKDEPLSEGEQHHLSGSDTSDSSTQPELTRSPKNWTQQDMQLALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSETDLRGALNALRSGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALAAIRAGACSVQRAASQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQSPQAIPQQSMPENMEMEPQSQSHEMYYQHQNVLPVNQSLHHPDQDLQSPYLQQNYVMSDPGFEAMHSSMLTEQYGMYYQGCSSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00680441;
- 90% Identity
- iTF_00325304;
- 80% Identity
- -