Ebil004723.1
Basic Information
- Insect
- Epinotia bilunana
- Gene Symbol
- -
- Assembly
- GCA_947049265.1
- Location
- CAMRIQ010000052.1:1933477-1949999[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.4e-10 2.2e-07 31.6 0.0 4 39 199 235 196 239 0.89 2 4 1.6e-11 8e-09 36.2 0.2 2 39 251 288 250 291 0.92 3 4 1.2e-13 5.7e-11 43.1 0.0 4 45 308 350 305 350 0.96 4 4 3.6e-17 1.8e-14 54.3 0.0 1 43 357 400 357 402 0.95
Sequence Information
- Coding Sequence
- ATGATTGGGCTGGAGCTGGCTCAACGTGCCGTTTTAAAAGTCATGTTGAGAAAACCTTTCCGTTTCCCTACCGACGATTTATATAAAGAAGTAGCGCCGATCCTTAGAGTTCGCCAACTTTACATTGTTAAAGCTGTTGCTGAATCTCACCAAAAGGCTATTGCTTCAGTTGATCATATACCGTCTCTGGAGCTCCGTCCGGTGAAGCTCGAGTCCGATATAGACGACAATGCGTCTGCGCACATATTACGACACTTGCAGGGTCCGGAGAGCCTGGAGGAGTtggcgccgccggcgccggcgggccCCGCCGCGACCCCTGTATCTGTTAAGCAGGAGCCCGCCGAGCCAGCAGTCACGCTCGAGACACTGGCCCCGGCGCCACACTCGGACACACTGggTGCTATGCTTATCGATAGACACAAGACGCTGCCCGGAGCGAACGACGCCGATTCCATGGACTTCATGCCTCTCCTTACTGTTAAAGACGAACCTGTCTCTGAAGGAGAGCAACACCACCTGAGTGGATCAGACACCAGTGACTCCAGCACACAGCCGGAACGCCGCGGCAGCCCTAAGAACTGGACGCAGCAGGACATGGAGATGGCGTTAGAAGCACTTCGGACACACAATATGAGTCTCACTAAGGCATCTGCGACTTATGGCATCCCATCGACGACTCTTTGGCAGCGCGCGCACCGACTCGGTATCGACACGCCCAAGAAAGAAGGCGCTTCCAAGTCCTGGAGTGAAGCGGATCTGCGTGGTGCGCTGCACGCTTTGCGGTCCGGAGCCATTTCTGCCAACAAGGCCAGCAAGGCTTACGGAATCCCTAGCAGCACCTTGTACAAAATCGCACGGCGCGAGGGTATCCGCCTCGCGGCTCCGTTTAACGCGGCTCCCACAGCCTGGCGGAGAGTTGACCTGGAGCGAGCGCTCGCCTCCATCCGTTGTGGAGCCGCCTCCGTGCAGCGGGCAGCTTCGCAGTTTGGGATACCCACTGGCACGCTGTACGGGCGGTGTAAGCGGGAGGGCATCGAGCTGTCTCGGTCTAATCCGACGCCCTGGTCCGAAGACGCCATGGGAGAGGCTTTGGAAGCTGTCAGGATTGGCCAAATGTCGATAAACCAAGCTGCGATCCACTACAACCTGCCTTATTCTTCGCTCTATGGACGGTTCAAGAGGTGTAAATATCAGAGTCCTCAAGCAACACCCCAGCAGTCTATGCCAGAGATGGAGATGGAACAGCCGCCACAGATGTACTACCAACACCAAATGCCAGCCATGCCGGGAGAATACCATCAGAGCTACCTAGCGGAGGCGGACATTCATCCCGGTGTTATTCAGGAGCCCTATGGGATGTACTACcaagGTTGCAGCAGTAGCATTGCCACCAGCTGA
- Protein Sequence
- MIGLELAQRAVLKVMLRKPFRFPTDDLYKEVAPILRVRQLYIVKAVAESHQKAIASVDHIPSLELRPVKLESDIDDNASAHILRHLQGPESLEELAPPAPAGPAATPVSVKQEPAEPAVTLETLAPAPHSDTLGAMLIDRHKTLPGANDADSMDFMPLLTVKDEPVSEGEQHHLSGSDTSDSSTQPERRGSPKNWTQQDMEMALEALRTHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLRGALHALRSGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRVDLERALASIRCGAASVQRAASQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKYQSPQATPQQSMPEMEMEQPPQMYYQHQMPAMPGEYHQSYLAEADIHPGVIQEPYGMYYQGCSSSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00680441;
- 90% Identity
- iTF_00659381;
- 80% Identity
- -