Eelu014575.2
Basic Information
- Insect
- Ephestia elutella
- Gene Symbol
- lrrfip2
- Assembly
- GCA_018467065.1
- Location
- CM031573.1:18422986-18434412[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-79 2.1e-74 252.1 23.3 1 298 5 284 5 286 0.89 2 2 0.9 2.4e+04 -4.2 14.9 1 48 282 328 282 348 0.72
Sequence Information
- Coding Sequence
- ATGGTGCTGGTGGCCGAACAGCGGTTGGCGGCGCGTCGGGCGGCGCGGGCAGAAGCGCGAGAAATACGCATGAGAGAGTTGGAGAGACAGCAACGCGAACAAGAAGACCATGCTGACAAGGCCTACGACATGTATGCAGAGACGGTGGGTCGCCGCGCGGGCTCGCGGTTGGCGGCGCTGTCGCCGGGCGTGCTCTCGCCGCGCCGCAGCTCCGAGGACTCCGTCGACGACACCTTCAGCCTCAAGGAGCTCAGGCACGAGCTCAAAGAGGTGGAGGAGAAGTTCCGCAAGGCCATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTGGGCTACCAGCTGGAGCTGCTCAAGGACAGGATAGAGGAGCTGCACGAGGAGTACGCGCAGCTTCAGCGCGAGCACAAAGAAAAATGTTCAGCGCACGAGCGTTTAAAACGCTCGCACGCGTCGCTCGAGCGCGAACTGAGCTGCGCACGCGACGCCGTGCGAGCGAGGGACTCTGCGGCGCTCGCGGCGGGGTTCGCGTTCGTGGACGCGGGGCccgggggggagggggagggcgGGGGGAAGCCTGCGCTCGCGCTGGTGTCGCACCAGTCGGAGCAGCTGCTTAATGATGCTGGAGAAGGCACGCTGGACGTACGGTTGCAGAAACTACTAGGCTCGAAGCAGTCGCTGGAGTCTGAAGTGCGCAAGTTGAAGTTGCAACTCAACGAGGAGCGCGCGGCCAGACAAAATGGCGTCGCCAACCATCACGACGCCGAGTACGAGAACGAATTGGAGACGCTCCGGAAGTGCGTATCGGAAGCGAAGGCCCGCGCGGCGCGGGCGGAGGCCGAGGCAGCTTTACAGGCGGCCGGAGTGGCCAGGCTCGAGGCGCAGGTGGCGCGGCTGCGGGCGAGGCAGGACCATCAGGACGAACACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGCTCGGGAGGCCTTGAACCGCGTGGAGGAATTGGAGACCGAGAACAACCACCTGACCAAACGACTGGACAAACTGAAAAACGCCAAGTCCGCGTTGCTCAAGGACCTGTGA
- Protein Sequence
- MVLVAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAGSRLAALSPGVLSPRRSSEDSVDDTFSLKELRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSAHERLKRSHASLERELSCARDAVRARDSAALAAGFAFVDAGPGGEGEGGGKPALALVSHQSEQLLNDAGEGTLDVRLQKLLGSKQSLESEVRKLKLQLNEERAARQNGVANHHDAEYENELETLRKCVSEAKARAARAEAEAALQAAGVARLEAQVARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENNHLTKRLDKLKNAKSALLKDL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00112516; iTF_00112515; iTF_01316370; iTF_01438950; iTF_00150567; iTF_01142407; iTF_01140213; iTF_01545768; iTF_01402734; iTF_01547567; iTF_00187184; iTF_01202480; iTF_01204913; iTF_01494324; iTF_00806745; iTF_00771100; iTF_01145278;
- 90% Identity
- -
- 80% Identity
- -